XLOC_000956 (gene) - C. hemisphaerica

Overview
NameXLOC_000956
Unique NameXLOC_000956
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000012:437604..443739+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_000956 ID=XLOC_000956|Name=XLOC_000956|organism=Clytia hemisphaerica|type=gene|length=6136bp|location=Sequence derived from alignment at sc0000012:437604..443739+ (Clytia hemisphaerica)
TGAAGAAGAGCTTTCTAGCAACTTGGGAATTTTGACTGATTGTCTTGTTT Cgacgaagaaaaaataataaaagttgtgctttttttatataaaatttgtt ttattgtttttgttcaTGTGGTGAAATTCCCACTGGGCATTAGGGATATA ATTTTTCGTGGTCATCATAATGCGCACTTTATATAAAATGCTCCTTTTGG GAGCTGTTTTGGTGGTGTGCACCTCAGCCAAGAAATTCGTTGCCACCGAA GAGGATGTTGATAAGAAGGTGAGTGATTCTTCATCTTGATGAGTTTTATT ATAGAGGAGCACCTATTATACCAGATTCGATGAGATTGGACcttgtgaat gttgtctataTGTAAGCACATTATGTACCTGCTGTGTCCTGTGATATTGA GAATTACCCCAAACAGATTACCATAGAAGAGTGTTTCCGAGTGtagtcag aaaatctgccgtatactatcttcgctttcttgatttgaatgatggcgctg cgACAGgacaattattaaaaaaaaaNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNaagaatgctgtaagaatattttaggatga ttttcccaaaaaagttaagaatatccacgatgaaatggatttacaccatt cttataaaaaaaaaagcgtgtatcggTATCAAAGATCGTGAAATCAAGAA ATCATGTTTTcatcattgaaattttaaagaGAAACAATGGAAATGGAGTC TAGAAAATTTACACAtatgaatgttggtacaaaataCTGAAATTGATCGG TATCGATATTTGAGTGAAAAAGTtcggtatatcggtaattggggtaaaaa ttgtgttttgactcgatactttttttacggacaccctgtatttaaCCTTA GTTACTTATTTTTAGGATTGAGCGCAAAagtattgtttttcaaaaaatag aggaaagaaaaacatcttataaataaaatatttggaAATCTAATCCTCCA AACTCCAGAAAAATGCATCAATAGGGATCTAAAAGTGTTTCCATGTTTGT GTTTGTAAATACTAAAGAAATTGACCTCCAATGAGCCCTGTCAGCTCTGC AAAACCTGCATGAAGAACAATGcaagaaaagtgaaaatgaaattgaaaac gtCTGTTTTTAATGTTTCAACTGCATAACAACAAAAATTTGTGGTTGTTT ACGCGACAAGTGAATTTTTACGCATTCAACCATTTCGAAAAGTTATGCAG AACGTACATTTACTTAATTGATTATTCATGCTGAAGAAGAGCTTTCTAGC AACTTGGGAATTTTGACTGATTGTCTTGTTTCgacgaagaaaaaataata aaagttgtgctttttttatataaaatttgttttattgtttttgttcaTGT GGTGAAATTCCCACTGGGCATTAGGGATATAATTTTTCGTGGTCATCATA ATGCGCACTTTATATAAAATGCTCCTTTTGGGAGCTGTTTTGGTGGTGTG CACCTCAGCCAAGAAATTCGTTGCCACCGAAGAGGATGTTGATAAGAAGG TGAGTGATTCTTCATCTTGATGAGTTTTATTATAGAGGAGCACCTATTAT ACCAGATTCGATGAGATTGGACcttgtgaatgttgtctataTGTAAGCAC ATTATGTACCTGCTGTGTCCTGTGATATTGAGAATTACCCCAAACAGATT ACCATAGAAGAGTGTTTCCGAGTGtagtcagaaaatctgccgtatactat cttcgctttcttgatttgaatgatggcgctgcgACAGgacaattataaaa aaaaaaagggaattctgattggttttaaattcaaatttggtgtgGCAGTT AATAGTTTCAGTTACATAATTTGTGGGTTCCACTGGACTCTCTCCTTTTC CCCCTGTCAGAATtagtaaaggcaaaaagtagttgagctccagctcctgg actaCTCCGAGTGCGCCTATACAGAGGACGCATACTTTACGTACTGTAAT TGGTTTGGCAAAATCTCAAACCAGAACAGACAGTGAGACAACAGACCCAT ATCAAATTATCTTTATAATTATACATATCCTATTTCGCTGACTATTGGCT TACAAGTACCATGAAACTCTGAATTCGAAAAAATTTAGTAAACTCTCATT ATAATCATTATGCatgtacagtggagtctccattaCTCAAACACGCACGG GTGAAACAAATTTGTAAAGGTTCAAGTTAAAGAACTCCATTGTATATACA TAGTAAATGCATTACAATTACACTTCGAGTAGAACCTGAGTTTATTAAAG TACTTACAGTAGAACCTGTGTCCCATCCTTACCAGTCTCCTCACCGTGAT AAAAATATTACTCGTAGCCCAATCTCACTTCCGAATGGagaattaagaat ttttttcaaattactgTAGTTTTAGCAGACATCCTTATATCTTCTTCCCT CTAATTTAAAATGTTGGCTGGTATTTCAGGCTTGGATTAGGCTAGATAGg aaaagaaaatctaaaggAATTCCTTAGGAAAAGCAGAATGttaaaaatat gattaaacattcaattctcaaaacaaaatctccAGAATTTTCTTGTTTGA AATAATTGTTTGATGATGAtgaattcattttcttttcatgTGGAAAAAAA AACACCTGTGACCACTTTACTCTGTATGACCGAGGATGGAAAAGGCCTAC AAATATTCTGATTtccaattttcaagattttgggGCACTTTTTTAAAACT CCTATCTCGCagtcccggtggaactttttctgGCAGTGGGAATGAaattt tctatcgaaatcctaatggagatagaaattttattgttctcaGGTCATAA AATCGAGTGGGGAAGGTTTTGAGTGAAATTCTTTCCCTTGGATTTGAAAT AGGAATGGAATCACAGTCAATTTTCAAGTGCGGCTGAAAATGTGGTGTAT TTTTTCCAAACGGAAAcgaaatattggccttaataaTAATTACCCTCAGT AAAGTAGCTCTGATTACTGGTATATATTATTCAAATTACTGatctatatt ttttttctaggaCGAAAGCTTTGCTACAgaccaaaaagtaaaaaaggtaA GTTTTGTTTCTCTCCCTTGTTCATCAGTAAGATTCATTATATCAAAATAC CCGAATTATACGTACTTAGCAGTGTTCTAAAGGttggatttttcttttta agttaGAAATCTTTGGGGCGCCGAATCCACTTAACCAAGAGTGGGACGTc tgtttgtaaaaaattgatTCCATTTCATTCCAGAATATGGAGTCATAGTA ATTATACAGTGATGTGAAATCTAACGCACATTGTTCTTTTGTNATTGATT CCATTTGATTCCAGAATATGGAGTCATAGTAATTATACAGTGATGTGAAA TCTAACGCACATTGTTCTTTTGTTCATAGATGATTGCACCAGGTTATTAC TCCCAAGAATGTAATGTCCACAAAGCATGCCCAGAACCTACCAAATATTG TCACATGTTTTTGTGTGTTGActgtttgaaagaaaatgttgCTTGTACAC AAAACGGACAATGCTGCCCAGGAACTGAATGTACTTATGGAAGATGCAAG AAAGGATCAGCTAAAGGAAAAGAAGGTATGTTATTGGTTGATGTTATTTC AAAGTCGTACCCAGTTCCTTAGTTTGCTTGTAATTCGCTTAGCGGTCATA TTTTGTTTACGTTCATTGAACATTTAAAAAGGATGAAAGTTGCTGATATG TGTAAAAGGATCTGCACAGGAAGTTAACATCATTGAGCTACAACCAAAAG AGCTAGAGCAGGAaacttcaacctttctcaagcaagaaaaaattaaactt taagaTTTGTGCCGTCTAATATAACGGATAGAATAACGGATTAAATCTAA CGGTTTTTTATTTTCGTGcggtatatttttcaaaatcttgcaatggcgtt tgtgtgaaaactaCGCTGGTCACGCGTTTTACAAATtcggaaataagtgg ctttatttCTCATCCAAGAGTTCCAACTCTAGCCCTACGGAGCTTTAAAC TAAATGGTTTTGCATGCCAATCTCGactacacccctgtgtcacagacccg gtgggacccctgccccactggaaaaataagCCCAaaattcgtccccggtg gagGAAAACTCCTTAAATTTCGTCTCCATTGGGAAAAATGTAGTATTACT ATCCCCACCGTAAAGTTTTGATCTGAATTTGCcgtccccactggattttt tgtattgaaaacaatggaaataaaTATCCCCagttataaaatttaaaagg agTTTTTCCCCCACTGGGATATTTGTTCATATTAGTTCCTAattctatcc ccactggctaTGAAATTTCCACCGggtcagtgagacaggggtgttcgaCT ATGTGATActgtaaaaaattgaatttacctTTTGTAAACTTTACCTACAC TTGCTAGTCCAAATTGATAcacaatttacaaaaatataagaGATATAAGA TCGTCATctccagtctttttttcgaaatggcttaggaaatatgaaatttt ttacCTTTAGTTTTGAGACTCAGAAATTTGGCTCTAACATTTATCTCTTT AAcaacatatttttttcatatttcaggAACTTTCTGCGATCGTCAAAAGG ATTGTTCCGGACCTGATCTTTGTTGTGTCCGTGAGCCAGCTATTAACCCA GTCATCAGTATTTGTAAACCTGCTTTAGACGAGCATGAAACTTGTGGACC ATACAATCAATTCAGAACTGTATATATCGGAGGAACTGTCCAACCTGTTT GTGGACCATGTAAACAAGGCCTTGTCTGTAAACAAGTCGGGTAAGTAGAT TTTTGAATTGATTATCGCTAATGGGGGACAGACAGGGAGCCGTCTTGCAT TTCTATAATACCGagttatgtatgtgtgtttttttgCGACTGAGATGGTA AGCTTTTAATTTGCTTAGATCCTGAATAGCTCAGGacaacggtaaatcag cacttttaccgtcctcgactttgcgggtcagaactacGGGTTTTTCGAAA tcacttcagtcactctaccgtcctcaataatgcaaatacataaactcggt aatctGATGTATAGACGACGGGTTCGACCTACCAGGCAAACTTTGGACTA TTTTGAGTAATAACAAATAAATTGTAGTTGAAAATTTCGCACTAAGTTTC TAAGATAAAAAACTTtagaacccggggggggggggggggttctaaggcaa aatgggttacgggatgcgccgctggtcaaggtaccttttttaacctccac gagtcccaggtagggtcgcaaaaacaccaaaatagaataACCAgaccctc gtagggtgccttttttggaaaatttggggaaaaagtagaaaatttgagaa aatttggggatttcagtcccattcagggtctgaatttttgaaaaaatgag tcccacatagggtccatttttcggacctcagcggagcacccccgtcggtc ggcaagggtagcaCTCCCTGGGCATTAGAAGAATAATACACTTTGAAATT GTCACTACTCGTACATTAAAacagattttctatccccattaccATCTAGC CCCTTATAATTCTCATTTGCTTAACAGAGACAGGGGTGCTttcattttta ccaattttctcTTTTCAGAATCTTTGGCGTTCACGAGATCTGCTTACCTT CAGGTGGAAAAGGAAAGAAATAAACGACTTATTATACAAACTCTTATAAT ACAGACTCATCATCTAAACATTATAGCACTAATGCTAATGTTATCGATGT AAAACATTACATGTTACATCAATGTTACCTTGTAATGCTTAAGTATAACA TCTCGCTATTACACTAACAACATACCAAcaattattgtttttatgattTA ATACAATCATAttgtttataaatatttttattttcgtaataTACACTATC ttagattatttttgaaataacctAGATTCCAactac
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00001780TCONS_00001780Clytia hemisphaericatranscript
TCONS_00001781TCONS_00001781Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00001780-proteinTCONS_00001780-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000012supercontigsc0000012:437604..443739 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.13 0.26 0.15 0.2 7.51 10.17 186.14 195.06 96.5 56.72 191.67 230.81 394.83 323.74 286.5 665.91 349.35 353 0.75 0.86 231.83 226.47 206.48 200.62 227.12 268.66 38.05 10.93 0.59 0.9