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XLOC_000880 (gene) - C. hemisphaerica

Overview
NameXLOC_000880
Unique NameXLOC_000880
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000011:770637..773891-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_000880 ID=XLOC_000880|Name=XLOC_000880|organism=Clytia hemisphaerica|type=gene|length=3255bp|location=Sequence derived from alignment at sc0000011:770637..773891- (Clytia hemisphaerica)
TTTCATTCTTTTGAATTTCGTTTTAGAACAACTAACAGTGAAAATTTTAA ATGGCTTTCAATGTGGCAGATTTACAAACTTTATTTTCGTTGAAAATTGA AGATTGTCACAACAAGAAACTGGAATCATGTTTAGATATTCAAACTGAAA GAGAAGATATTGTACCAAACTTATTTGATGAATTTTCAAACATTGCTGAC ACTGGCGTTTTCCAAGAACCATTCTCATTAAAGAAATATAAAAACCTCAT CCCAAAAAGATCCCCAAAGAAAAAATCAAGAAAGTTGAAAAAGGTTGATG TGAATAAAAATACAAAACTTCTTTCTAAAGAGAAAGTTCGAAGCTGTAGT CCTTCATTTAGTATTGATTCAGCTGTTGATTTAAGTGCTGACAATTCACT ACTGCATACCCAAAAATGGTTTGTTGATACTGATTTTGATGTTGATATAC AGTCAAATTGTGATAGTGGAGTTTGCGATTTCAATATATCAGCCGATGCC GTTATGAAAAACTTGAGTGATGATATTCAATTGTCAATAAAAAACAATGT TAATGCAGACGAATTCCCCGAAAAACGTTCATCAAACAAGCATGACTTTG ATAATATTCAATCAAGTATTACAACAAACTCTTCCTGCAGTGAGAAAAGT AAATTGAAAGCTTTGAATAAAAAGTCAAAAAGATTCAAATCTAAAAAGCC AAGACAGTTCAAGGATTCCTTTAGAAAGCACAAAGAAAGCTATATGAAGC TTCTTGATGAGCAGAAATGTATTGTCCAACATTCTAGGAAGGAATCACGT TTATCCACCATTAACTCGTTATCTGATATCCTTCTTACCAACTTAGATCA TGCAATACCAATTATTGTTGAAAAAGAAGGTCAAAATGTAGAGCACTTAG GGAAAAGTTTAACCAAAGAAATTGAAGTCCAAACTCTAAGTAACGAGAGT CATTTTACTGAGTCCCTCATGAATATGATCTATACACCAATGAAAGATAA TGATGATTTACAAAGCAATCCTTTGCTTATTGATCCACCAGAATCATTTT GTCTGCCAACTAAAGAGGTCGACGCACCTGCAAAGACTACTAACATATTG AGTACAAGTTGTACAATCAACAGTGAAACTTTAGCTGATAAAGATGTTTC AGGCAAACTAACAACAGTGACTTCCAGCTCAATAGATTGTCCATGTGATA ATAATCCAGATGGAAACACTCTAGCTGGCGATAAAGATTTGTCTTGTGTC ATTCTAGAAAACAGTGCCAATGTGAAATCATTCAACATTAAACTTTTTAC TGAAGTAGATAAGATCATAACAAAAGAGTGTGCCACTTCACCCGTGAAAA TGAAACCTAGAAGGCGATTCATAGTTCAAGATGATGAGGATATACCAAGT GCTTTATTGGAAATTCTAAATGGACCACAAGAAGTTAAAAATCCTTTAAG TACACCTGGTCAAAATACACAAATAGCTACTGCTGATGAAAATGATATAT CAATGAAGACTGATTCTAGTTCCAAAACTGGTCATCACACTTCAATACAA ATCTTAGATAAAAACCAGACATTTGATTCGAGTGCTCCAAATTCAAAACA AAGTACCTTCACTAAATTGTCCAAAAAGAGTGAAAGGGTCGCATCGGACA GTGATGGCTCNTTCACTAAATTGTCCAAAAATAGTGAAAGGGTCGCATCG GACAGTGATGGCTCCACATGTGACACCCAAGATCTTCCACGACCATCAAA TGATTTCTGCGTTAATTTACTCAACTTTTATTGTACTGGACTTCTTGCAA GGAGTGATACAGCTGAAGAAAACAGATCTAGTTTTTCTGAATATTCAGAT GATGAATAATTACATTATTCCAAACATGGATATCGGTTACCAATTTCTTT GTGTTGGGCTTTGGTTGGTTATGTGTTATATATAAATTGATGAATCTGGC CCCCAGGTAAATATACCGGCAACCTGTTTCTTAGGAACTGTTCCTTTAGA GACTTGGATAATCTTTCAAATATTTATAGTTTAAGAAAACATACAAAAAA ACTTTATTAGAACCTAACTTGTTCAAAATTCTCATTATGTATATAACTAT CTGATTAATTAGTTTGATTATTTCAATGTTTTTAGTAGGTTANTATAACT ATCTGATTAATTAGTTTGATTATTTTAATGTTTTTAGTAGGTTAAAAGCC TTCTTATTGTTTTGTTTCAGTGGCCGGTAATTTGTACAATGTTGTGTTTG CAGATGGTGGTACGTATAAAATCTATGGTAGTATCATCATTTTCAAAAAT TTCTATTAAAATTATGAACTAAAAACTTTTCAGGTGTGTCTTAAACAAAA TTAAAGAAAGTCGAAAGTTAAGTTCAAATCTTCAATTCTTATACAGACAT TTTTCGTGTTTTTCAAGTATTCATACATCTACACACTTGGTATGTATAGT TCCTTGCTTTTCCCATACCTTTAAATTTCCAAACAATGTAATATTTTGTA AACAAAACTCTTCTTAAAACCTGTTTACTTTTTTGCATAAAGAAAACTAA ACTTTTATTATACTACTATACTATAGACTAGGCATTGAAAGTTTGAATCT AAATGGTATCTGGATCTCAATTACATCATTTTTGAAATGCTCTAATAACT AAACTTTCTCCTCTCTTATAGCTTTGCCTTCATTGCACTCATCCGTAGGC AAGCAATCAACAAAATATCAGTATAAGGCTAAGTATAAAAAGGTCGTAAG TAGACCTGTAAGTATAATTTTTTGGTAAGTGTTTCCTCGGGTAGTTAAAA AACGTCAGGTAAAGTTTATACAGTCTTAAAAAATCCCCTCCTTGATCATG GTTTTATTAGACCGGTCGGTAAGAACAAAATCATAAGAACAGGTACTACA CTATAAGAACAAGATACTACAATGATACTTAAATGTGCGAATGTTTAAGA TGCGATATAATTTAGAATTTAGAATAATGTCTATTTCATTTTTCACCATT TTGTAGCATATTTTTTATAATTTATAAAATTTATTTAGCTATTACATATT TTGTCTATTGAGATGGTTTTCAAATTAAAATCTTCTAGTCATGTTGTGAT GTCAAAAGGGAAAAAATATCAGCTTTTTTGGGGCCAACTTTCTTTTTAAT TCGAAATGTATTCTACTCAACATTAGATTTAGTCTAAAATGAAGAACAAA ACACAGCGCTGTAAATATTGTACTCAGTTTTGTTTATATTAATGTAAAAA ATAAT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00001690TCONS_00001690Clytia hemisphaericatranscript
TCONS_00001689TCONS_00001689Clytia hemisphaericatranscript
TCONS_00001688TCONS_00001688Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00001688-proteinTCONS_00001688-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000011supercontigsc0000011:770637..773891 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
3.17 3.02 2.05 1.4 10.14 8.46 8.11 9.78 7.82 6.02 11.2 8.39 10.83 10.1 5.84 4.08 6.74 7.77 4.51 4.64 9.75 8.64 5.13 6.8 9.26 12.64 4.4 2.46 4.07 3.97