XLOC_000841 (gene) - C. hemisphaerica

Overview
NameXLOC_000841
Unique NameXLOC_000841
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000011:915658..925385+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_000841 ID=XLOC_000841|Name=XLOC_000841|organism=Clytia hemisphaerica|type=gene|length=9728bp|location=Sequence derived from alignment at sc0000011:915658..925385+ (Clytia hemisphaerica)
AATCTGCTGTCCATCTTTGATTTGAGAAGTGAGGCGGCGTCTCAGCTTAA AATTTTTTAtatgtctttaaaatttttgataaagatttcaagtttttttc tGTATAATTTTGACTGGTAATGCTTAGATATTTCATGATGtggttttcat ttatttttatagCTGAATATATAAGTGAAACCAAAGGAAGCTCGCATACA TAAAGAAGCAGACGTGGTCTTGTTTTGGGGgtgtttgatgatttttttct agaatttcAACAAAGATGGCAACCCTCGCTTCTTTGAGTAGCACTCGATC GTTCACCTTGAATGTTCATGTGACTGACCTTAACACTCAAAAAAGTATTG AAGTCAATCTCGAAAGCCATGTTGGCTTTGTCATGCTGGAAATCGTTGAG AAATTAGgtataaagtttttatttttacctcCACTGTTTTTCATATCAAT CTAACCTTTTTGGAATGATAGCTAGGTGTTCCGTTAAAATGAAGCAAGAA ATTCTGGTAAAGTTCTATTAGTTTGTTTGATGTTTTAAATGTGTCTTTTC GGGGATTAAcagtttttttcataaataaTATTAGAACATAGAACATGACC GGCTGTCAACGCACCAGGCGGTCAtagaaaaattgttctgttcacGTCAA ccgcccgcatcatattttccgctgattttctggtgcggagatgcggaaaa aaatctgtgttcttttaaagtatagctttttttctcaatttgctCTGACg gccatcaaaaaattgttttgctcgcgtcaCCACCCGCCCCTGAATTACTG GCGTCCtcccgcccgcatgcatttttaacacccgttgcgaccaGTCAGGC CCTCCTTGGTCTTttataacattagttcggatagaataaaaacatacctg atcaacacaaccaaactctttccttcccaacaactttcgtttttgcctAT GTAGGTTTTGAAATCCAcaaagtaatgaacctcttatagctttatctgaa taaatctggttgaaaaccttctgtcgggtttcattccgtacgttttttat ccacaagactatttacaaattattttctttaacaggCTTTAAATCAACAT Tgtattgacatatttaatgatgtcataatcagcgccgtgcatattttgtc agtgccgtgcatattttgtcaacatctttttcattggataaataccaata aaatataaatttatcgcccgcgagcatggcttagctaagcgcatctctct tattcattatctaagaattgaagcgaaCAAAGATTACCGCGTgggctgat agcggacaaaggttatttgaagatatattcagttataatccaaggtagaa caatcTAAACATAGAGAGGAGGTATTTTTtcgtgctctatacgatgatcg gtattttttttgaattctatgtttagatttttctacccagccccgttgct acgTACGCGCCCcttgttgctaagacctttgcttgaaatcaaaaagcgaa accaaaaaaatttagcacacactgccgtttgcgtagtATCAATAAAGTGA AAGGAGGTCATGACtggttgcgacgcgaacagagcattttttcgatgacc acCTCAGACTTTAcgaacacctgatttcttaacACCTGATTTTTTAACAC CTGACAATCTCAACACCGGACAATCTCAACACCGGACTTGAGTCTGGTGC GCCTGGTATACATTATTTTGAAGGAAACTTTGTTCCGTGTCCAGAAgtta aaaaaagttagtaccggAACTAACTCCGAACAAAAGGTTTCCGGTACTTT TTTTTGGCACTGGACAAACACACCAGACTGTCCAGTGCGTTGACAGGGTC GACCCTTTGCCCAGGTCAACCCATGCtaatgtgaggggaattgggtaccg tcaactgctctagctTGGGAGGATTGGTTGAAACATCTGACTACAATCGA TGACggaatacttggcacaaaagggaaatccgccaggaagttttgaaacc acatttgcaagtgctctaaagtagtttcgaagggtagagttttaaccctG AGTTATAACGCTATACAGCGCTATAGACTTAAGactccaaaagttcaaaa atggtccagtagggcttgaaatatagcctagaatgtagaaaccaataaat ccctcccagattgaaataatcaatgaaatcaagttgaaggccctaAATTG ACATTCTTGCTTGAActtcaattttcataaaatgatAAATTAACTGGCCA AAtgattagccaaaagtgccaatatgttatggcactgattttagttgata tctggtctgtattttcacttactgttaaatctctttgacaacaaatttgt tttgataactccaccaagtttatcaatcctacttcttcgttcctcttaga gtgcacagacactctTGTGTGTTcaactacggattttttttatatttcca tttaaaagcctactcggtgcgaaagagaaatagtgtattttttaatacgc tgttcattaactcaaatcaaatgactttggaggttcggtgaaatcaCCAC catggccaaattgccgtcccatgttttgtcagatagtcccaagttagagc agttgacagtagtcagttcaaggtgctttCAGGGAgctaattgaaagcgt ctatagttgcaaaaataagcctcaaagcctcctgcgactcaaccaaatag aaataggccaatgcaatgacttctttcaaactttcaaaggTTTAAACTGC CACTATTTGCCTACTCTTACAAATAGAATAGGCAGGGTAgaaagttggct gtctaaaaGGCAGAATTTAtgagataaaaaacaaacatgcAGAATTTTCT CCCACATCTCTTCAGTGTTTACAAAATACCAAGattttcttctaaaaaaa acaacatcttCCTGTAAAATGGGAACAGCCGAATTTCATCTCTGAAAAGG CGGTAAACAGTGGTAAACAAACTGTGTTTCTGGAATGAAAATGAGGGAAA ATGTTTTACACCTGTTTTTTTATCTGTATCTAATGAAATAACTACTTTGT AGAAAAAATAATACAGctcaaaattgaacaaaaagaattctttttatata ttatttgaGCCCAACAatctgttttttcaaaattgtttcgGATTGGGGAT TTGTACGTTCTTTTATTAGTGCTCGCCTACAGAATTCCTCATTCACAACT AAAAATGGTGATGAAAttggtttaaaaattaaaagtttactTTGTAGCCC AATAATGACATTTTCAGCAACATTTATCGTAACATGCAGTATCATGCCCA AAAAGTAAATCCAAGATTTGATCAAAATAAATTGATCTGGGAGGGCAATT TGAGTTGATCATCTGTATTTTGTTTGGGAAGTTAAATGCTGAGGATTGAC CAGTTAGGAACAGGCATCTGGCCCCTCAACACAATCATGGCTTTTCAAAC ATGACAGTGCATTGAAATTTATTAAAGCTTCCCAAGAGCAGAGTCGTTAA CAGATAATATTTGGTCTTTCCATCTTTTGATAtgtatcaatttttaattt tttttaagtctTGTAAATTTCATTTTAGATGTGACTGCTGATTACTCAGA CCATGCGTTGTGGTGGCCAGAGAAAAAAATATGGCTAACTAAGGCAAGAT TGTCACTGGCATCTTATGGAATTATTAATGACACTCAATTACTTTTTACA CCTCAACACAAGAGTGTCAGACTGTTGATGCCTGATCTCCAGGTCTTTGA TATGAAAGTAAATTTTGCTGTCGATGTATTGCACACAGTTTCAGAACTTT GCAATGAACTTGGTGTGAGACATTCAGAGGAGCTATCATTTATGAGACCA TACGAAACTGGGACGGCCAAGAAAcgaaaaaagggtaaaaaaggTACAGG CTCTAACACTGGATCAGATGATGCAAGCTCACAAGGCAGCTTTGGGAATG GCACTCTTGGACGTTCTACAAGTCAAGAGCCAAGAACTCCAAGTTCTCCA GCTAGCAATAGACTAAATAATTCTTACAATCCTAATGATACTTTAAATCC ATATTCCACCGCAATGTCACCCATGCTTGCACACAGTCCTAATGCGCCTA CACAAGATCAACTAGAGCTTATTGGCCTTGGAAAATCTGTATTGGAACGA GCAAGTTTCAATTGTGGATGGCTTTCTTCCTCAGAATCTTTAATGCAACA GGTAATTTCTGAGTTATGAATGATTAGAGAGTTTTTCtacaaattttcag aatttttctgaaattcataggaaaaattcaaattagttCAAACTCTCATA GTCTTAATGTCATATTTTTCTTTGAGTCAAAATTgtctgataattttttt tattgaatactTTAATGTTGTCATTTTAGAGTCTTATCTATAATCTGTTG GATTACTGGCTATTTTAATTCTAAGTAGAGTTTATTTAAATTAATAACAT AAACCCATTCAGATATTTCTTTCAGTTTTTCAAATAACCATTATATTTAT TTATGTTTACTTTCCTTGCTCTGTTTGAGCAATCCTGATTTTTCAACGTT TCCTTTGTCTCTAAATTTCAGGGAATCAAAGAATACGACACATTATACAT AAGATAtaaatatttcaacattttcgaCCTCAATCCCAAggtattttttt tcacaattagTTTTTTTACAGAAATTAAAATTCAGCTATTGTACTACTCT TTAGAAATATaggccagggcaaaccagtccaacatttcatccaacatgac ttggaaaaaaagtgaaaattaaaaaaataaagaaaaaagtaccatcaaac caatccaacacgaaaaattacacaattcgATGAGAGAGCTTCTTTAATCT CGccgcaaatgttggatgaaatgtatgatggcgatcaaacttcatccaac accgtccaacacaatttttttcttcttattttgaattttcattttttttc aaaaatttgaattcatgaaaaaaggcatgttggatgaaatgtatgatggc gatcaaacttcatccaacaccgtccaacacaatttttttcttcttatttt gaattttcattttttttcaaaaatttgaattcatgaaaaaaggcatgttg gatgaaatgttagATCGGTTTGCTCCGGCCTTAACCAACACTTAAGGCTA ACCAGGCATGATGCACCAGGTATAGCTAAAAAGAGTTGTGTTTGTTTGCT CGTATATCTGAGTTTATATATGGGTCTGACCTTTTATGTGATTAACTTTG TCAAACTTTTACCCAACCATCTTTTTTCATTAGATTGACGAAGTTAGAAT AAACCAATTGTATTCACAAGCCAAATTACAAATCCTCACTGAAGAAATTG ATTGCACAGAAGAAGAATCAATCACTTTTGCAGCACTTCAGTTCCAAGTG AAAGTTGCATCACAAAATCCACAAGGGAATTCTGGACCAGATGAAGTCGA TGATATTGATTCTGCTTTGAGTGAATTACAGGTACTTCATAACTTCTGAT GTTATTAGATTAGGCGTGTGGTACAGGTTAGAAACAGGACAGACGATTTT TAACGCCAATCAGTTAACTGAACCCCGTCTCTCTTGAAATCACAATAATT GTGCTACCAGCAGACGCTTCCCTGCCTTGTTGAAATATGTTCTGTATGTT AAGTCTGAGGATGACTATAATAAATGAGAATTCGATTATCTTCTTTAAGA TGACTCTAGAAGGAAGCAGCCAACAACCATCTGATATTCCTACAACTCAC ACCAGGCCTGTAAGTATCCTTATTAATACATCTCAACTATTCTTGCAGTG TAAGTATATATAAGTAAGATTACTTAATCTTTCTTCCCAACCCAaattcc tgtttttttttcaacgcAACATAATGCTGACTTCAAAACCAAAAGTTGCA AGGGAGATAATCTTCcgagaaatttttcttgaaagaCCTTTTGATAAGAT CAACGTATTTTAATCGAAAAGTTGCAGACTTTATTGTtataaaatgttgt ttttataaCTTTTACATCTTCAATTTTAGACAATGAGCCACATACCAGAG ATGTTCGATAACTTGAGTATAATAAAGTAAGTTGGAATCACCATACCATA TTTAGAAATGctttttgctccggcctaggagcctttaattctctcttccg acggtcaagacattttttgtttgtttatctaatccgataatctattccga tttaataaaaacggNATATTTAGAAATGCTTTTTTATTGGCTACTTCAGG CTACTTACTATGCACAAAACTATAAAGTcttatttatctttattttataa atctTATTTCGCGCGAAAAATTATTCTTCTATAAAATAATGTGCTCAAAA AATGTAATGCTCAATTATAGTAGCAATATCATTTGAAAGtaacaattttc ttttcaggAAAAAGACGTTTGGCACTAGCAAAACAAATTATTATTTCCAA TTCAAAGACACTCATATAGCTTACTACAAAACCATGGCTGATGCTCAAGG TCCACCAGTACAAAAGTTCAATCTTAAAGGTAAGTTTTCCacagtttttt gattttttaaaaaatcattgattttttgaagtgtcttttatattgaaatg cagtcatttttttaaatcgaaaaaccaaaaagatcaaaaagGAAACTAAA AGAATTCCATAGAAATTGCATTAAAAGTATTTTCATTCCCAATTCCTATT TCTTAACTGGGCCCACCAGAAACTTATTTGATGTCTATTTTGTCTTGTCT GTCTGGTAGTggtttagtttattttttttttacttttcccaAAACTCAAC TTGGAATTGGTTTGTAATCAGTATTAGGCAAGTTGTTACCAAAATCTAAG AAAGAACGGCTTCCAAACTAAGGGTTTCTTGTATAGACTATAAGAGCTAA GACTGAGATCATAACACTGCTTAGCATGTTCTTTCTCTAtcttcaatctt tttatttAGGCTGTGAAGTTACTCCTGAAGTTAATATAAACAAAGACAAA TACAACATTAAACTCACCATACCCGGACCTGATATGTACGAAATGGAAAT GGGATGTAGCTCACCTCAACAGTACGTAAAATGGATGGCAGCTTGCCGAC TTGCGTCCAAGGGGAAAACAATGGCAGATCCAACATACGAAATGGAGATG TCTGNCAGCTTGCCGACTTGCCTCCAAGGGGAAAACAATGGCAGATCCAA CATACGAAATGGAGATGTCTGGTGTTCGCACTTTCTTAAACATGCAAAAC GATGTGAAAGACTCCAGCAAAGATGATGGGGATTATGATGCTGGAGCACA TGTGAGTTttatttttaccaaaatgaaaattcCATTCTCACTCTATGAAT GTTTCTGTCATGAAATATAGTAATCATCAACGTTAGTTATTACATAATTA AGAATCTTTTTTCATAAAGAAAGAAACCTTGAGATCTTGTCTTACTGGCG TTTTTTTAATTACCCTTCATTAACTTCACCTCTTTTCACACATCATAGGG TGGTATGCATCCAGAGGACTTTGTTCCCCAAAGAGTACTGAgcaaataca aaagcaaacagGTATGTGTGATAACCTAGCATGTGATAATGATTTCTTAA GCATATGTTTGATTGTGCTCAATATAGTTTAAGAGTGAACCTTTTCAGTT CTTGTCATTTTGAACAATGGTTGATTTTAAATCACCTTAAAAAAAATATC TGTTAACAATTCGAACCGGGAACCTTTATTCATAAAGGTTTTGATGTATT TTCTttgttatacttcttaaaacTTTTACTGTTGTCCAAAGTGAATTCCA TGAAAAATACAGTGTATATATGTTTTCCCACACTGTTTAGATTGCTGCAC GTATCCTAGAATCACACACCGCATTCACTAAACTTGGTGTCATTGAGGCC AAGATGAATTTCATCCGGCAATGGCAGGCTTTACCCGATTACGGTGTTTC CAAGTTCAACTGCAAATTCAGAGACTCGAAGAAGAAACAAGTAAttttta attaactttttcactaaaagtAATATTTATATTGTCGTTGTCCAATTAAA GAAATTATACCCAAGCTATAAACGCAAATTGGTTACCCTTGCGTTAATTC CAATTTGAGCCGAGGTAATTCTCGAAAACCCTGCTTTTAGCGTTAATAAA TTGTCACACTCGTATTTCCGCGTTAAATACTTGATTCGTGTAACGaggta tatattttttgaatacaGAGCAGTCATTATTGTCTGTCATGAAATGCAAT TTTAGTCACTAAAGTAGTTTAAAGTTATATTTCTTGAGAAATTTCACAAA TCGCTTAACCTTTTTTCATTTCTCCTCAGGAAATCATTGGCATCGGCACC AAGGGAATTGTTCGTTTCGATCTCAACAGCCGCACAGTGATCAAACAATG GAGATACAGCACCATGAAAAACTGGAACGTCAATTGGGAAACCCGCGAAA TGATTGTGACCTGCGAAGGAGAGACCATCATTTTCTCACTCCTTGGTGGA GACATTCGTTTAGTCCATGAATACATTGGTGGCTATATTTTCTTGTCCAT GAGAAAGGACGTGAACGCAGCTCTCGACGTGGAGATGTTTTATAAATTGA CTGGTGGCTGGAATACCATCGGTGGTGGTGAAGGCAAAGATTGGTCCTCC AAACCGGGGTTATAATAGAAAGAACATTATAGAAAGAACATATGATCGAG AGTTTCTTGTggtgaaaagaaaaagagttcAACCAAATCAACAGGCCACG TGATTTGACCATGCTCAGACGTTGTCAATCGACGTATGTTTTGGAAAAGT AGAGTTGTGAAACCTCTGAATGCTTTCTCACCATAACAGAGATGATTTTG GTATGGTTGCagcatttaaaatatttcagcCGTTTTCGATCTGCAACGTC TGAATATGATCAATTCTGGGGCCTTTCGTTGGTTGGTTGGCTGGCTGGCT AGTAGGTTTATTTCTTAAAGGGTGTTGCTACTGTCTCGCCCATAAGAAAG GATTACGAAATAAATAATTAGAGAACTATATACAATGACAATACATGCAA AATGTGAGAAGCATTCTCAATCATTGAAGAAACAGCTAAAATACGGTTCT TTAACTGGTGGACGCTGAaaatgtagatttttttttaaaatgaattttag ttttttcattctttttagatatttttgtaCTTAAGCTTTTTGTTGATGTA ACGTAACTTGTACCCAGGTGTACCAATTAAACTTGTAAGGAAAGTGAGGA AAATACCCTCAAACATTTTCTCTGAATTCATTCACAAGAGCCAAGACTCT ATCTAACAACATTCAGAGAACTTTCAAGCAACCTTTTGTTGTACCTTATT ATTTTAATTTCCGACATATGGTAttgaattttcattattttttgtataTT GTGTTGATTATCCCAAATTTTCGAACCATGCTTGTGAAAATCTGTTAGTT TTATTTAGAAAATTGGTTTATGAGTTTCCTGGCCTGTGACCACCtgatat tttaattctttaccAACTTTCTGCAAATAATCATAACATTTTCTTGTTTT AGGGTCCTTCGAAAAAATAActataaattattatttttagtttGTACCAT CTTAAGTATAATATGTATCCAAgatattttttcatgtttttgttttcttt tttttttgttttcctttatAAATACATATTATAACAACGcaatttttaaa gaacaaaagaagaaattgtcGTCTTGAA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00001614TCONS_00001614Clytia hemisphaericatranscript
TCONS_00001615TCONS_00001615Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00001615-proteinTCONS_00001615-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000011supercontigsc0000011:915658..925385 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
FERMT1fermitin family homolog 1 Homo Sapiens
FERMT3PREDICTED: fermitin family homolog 3 isoform X1 Homo Sapiens
FERMT2PREDICTED: fermitin family homolog 2 isoform X1 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
31.62 29.29 34.76 36.37 175.75 137.79 201.39 216.54 82.21 111.96 63.65 44.14 106.66 78.78 60.53 59.5 111.96 113.33 60.28 86.49 73.1 74.9 60.81 64.01 60.24 74.04 188.63 201.13 218.48 243.56