TCONS_00001615-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00001615-protein
Unique NameTCONS_00001615-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length694

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00001615-protein ID=TCONS_00001615-protein|Name=TCONS_00001615-protein|organism=Clytia hemisphaerica|type=polypeptide|length=694bp
MATLASLSSTRSFTLNVHVTDLNTQKSIEVNLESHVGFVMLEIVEKLDVT
ADYSDHALWWPEKKIWLTKARLSLASYGIINDTQLLFTPQHKSVRLLMPD
LQVFDMKVNFAVDVLHTVSELCNELGVRHSEELSFMRPYETGTAKKRKKG
KKGTGSNTGSDDASSQGSFGNGTLGRSTSQEPRTPSSPASNRLNNSYNPN
DTLNPYSTAMSPMLAHSPNAPTQDQLELIGLGKSVLERASFNCGWLSSSE
SLMQQGIKEYDTLYIRYKYFNIFDLNPKIDEVRINQLYSQAKLQILTEEI
DCTEEESITFAALQFQVKVASQNPQGNSGPDEVDDIDSALSELQMTLEGS
SQQPSDIPTTHTRPTMSHIPEMFDNLSIIKKKTFGTSKTNYYFQFKDTHI
AYYKTMADAQGPPVQKFNLKGCEVTPEVNINKDKYNIKLTIPGPDMYEME
MGCSSPQQYVKWMAACRLASKGKTMADPTYEMEMSGVRTFLNMQNDVKDS
SKDDGDYDAGAHGGMHPEDFVPQRVLSKYKSKQIAARILESHTAFTKLGV
IEAKMNFIRQWQALPDYGVSKFNCKFRDSKKKQEIIGIGTKGIVRFDLNS
RTVIKQWRYSTMKNWNVNWETREMIVTCEGETIIFSLLGGDIRLVHEYIG
GYIFLSMRKDVNAALDVEMFYKLTGGWNTIGGGEGKDWSSKPGL
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_000841XLOC_000841Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00001615TCONS_00001615Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001849PH_domain
IPR019749Band_41_domain
IPR014352FERM/acyl-CoA-bd_prot_3-hlx
IPR019748FERM_central
IPR011993PH_dom-like
IPR000299FERM_domain
Vocabulary: Cellular Component
TermDefinition
GO:0005856cytoskeleton
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0005856 cytoskeleton
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001849Pleckstrin homology domainSMARTSM00233PH_updatecoord: 370..473
e-value: 2.0E-6
score: 37.4
IPR001849Pleckstrin homology domainPFAMPF00169PHcoord: 381..470
e-value: 1.2E-5
score: 25.7
IPR019749Band 4.1 domainSMARTSM00295B41_5coord: 88..572
e-value: 5.6E-20
score: 82.4
NoneNo IPR availableGENE3D3.10.20.90coord: 92..268
e-value: 3.0E-19
score: 68.5
NoneNo IPR availableGENE3D3.10.20.90coord: 12..89
e-value: 2.1E-5
score: 23.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 138..221
IPR014352FERM/acyl-CoA-binding protein, 3-helical bundleGENE3D1.20.80.10coord: 269..565
e-value: 3.8E-29
score: 100.7
IPR019748FERM central domainPFAMPF00373FERM_Mcoord: 274..572
e-value: 3.8E-32
score: 111.1
IPR019748FERM central domainCDDcd14473FERM_B-lobecoord: 503..559
e-value: 1.77582E-5
score: 42.6187
IPR019748FERM central domainCDDcd14473FERM_B-lobecoord: 284..325
e-value: 5.86208E-5
score: 40.6927
IPR019748FERM central domainSUPERFAMILY47031Second domain of FERMcoord: 267..325
IPR019748FERM central domainSUPERFAMILY47031Second domain of FERMcoord: 518..567
IPR011993PH domain-likeGENE3D2.30.29.30coord: 567..656
e-value: 2.4E-9
score: 37.1
IPR011993PH domain-likeSUPERFAMILY50729PH domain-likecoord: 568..656
IPR011993PH domain-likeSUPERFAMILY50729PH domain-likecoord: 377..471
IPR000299FERM domainPROSITEPS50057FERM_3coord: 187..660
score: 11.703

Blast
[Close]
BLAST of TCONS_00001615-protein vs. Swiss-Prot (Human)
Match: FERM1 (Fermitin family homolog 1 OS=Homo sapiens GN=FERMT1 PE=1 SV=1)

HSP 1 Score: 498.049 bits (1281), Expect = 3.666e-168
Identity = 283/694 (40.78%), Postives = 419/694 (60.37%), Query Frame = 0 
Query:    7 LSST----RSFTLNVHVTDLNTQKSIEVNL----ESHVGFVMLEIVEKLDVTADYSDHALWWPEKKIWLTKARLSLASYGIINDTQLLFTPQHKSVRLLMPDLQVFDMKVNFAVDVLHTVSELCNELGVRHSEELSFMRP---YETGTAKKRKKGKKGTGS---NTGSDDASSQGSFGNGTLGRSTS--QEP--RTPSSPASNRLNNSYNPNDTLNPYSTAMSPMLAHSPNAPTQDQLELIGLGKSVLERASFNCGWLSSSESLMQQGIKEYDTLYIRYKYFNIFDLNPKIDEVRINQLYSQAKLQILTEEIDCTEEESITFAALQFQVK--VASQNPQGNSGPDEVDDIDSALSELQMTLEGSSQQPSDIPTTHTRPTMSHIPEMFDNLSIIK-KKTFGTSKTNYYFQFKDTHIAYYKTMADAQGPPVQKFNLKGCEVTPEVNINKDKYNIKLTIPGPD-MYEMEMGCSSPQQYVKWMAACRLASKGKTMADPTYEMEMSGVRTFLNMQNDVKDSSKDDGDYDAGAHGGMHPEDFVPQRVLSKYKSKQIAARILESHTAFTKLGVIEAKMNFIRQWQALPDYGVSKFNCKFRDSKKKQEIIGIGTKGIVRFDLNSRTVIKQWRYSTMKNWNVNWETREMIVTCEGETII-FSLLGGDIRLVHEYIGGYIFLSMR-KDVNAALDVEMFYKLTGG 676
            LSST     S+ L V V   N ++  +V L    + HVG VML++VE+++++ D+SD ALWW +K  WL K   +L  YG+  D +LLFTPQHK +RL +P+L++  ++V+F+  V   VS++C  L +R SEELS ++P   Y     KK K  K+       N  S   +S  S   G   ++ +   +P   TP+S      ++S        P +     +LA S    + + L  +   +S++++A  N GWL SS SLM+QGI+E + L +R+KY++ FDLNPK D VRINQLY QA+  IL EEIDCTEEE + FAALQ+ +     S   Q  +G  EVD+I++ALS L++TLEG                ++ IP++ DNL + + KK    +   Y+F FKDT IAY+K     QG P++K NL+GCEV P+VN+   K+ IKL IP  D M EM + C    QY +WMAAC LASKGKTMAD +Y+ E+  + +FL M+N  ++S+       +  +  M+PE FV  R   ++KSKQ+AARILE+H    ++ ++EAK+ FI+ WQ+LP++G++ +  +F+ S KK +I+G+    +++ D  +   +  WR++ +K WNVNWETR++++  +      F+ L  D ++VHEYIGGYIFLS R KD N  LD ++F+KLTGG
Sbjct:    2 LSSTDFTFASWELVVRVDHPNEEQQKDVTLRVSGDLHVGGVMLKLVEQINISQDWSDFALWWEQKHCWLLKTHWTLDKYGVQADAKLLFTPQHKMLRLRLPNLKMVRLRVSFSAVVFKAVSDICKILNIRRSEELSLLKPSGDYFKKKKKKDKNNKEPIIEDILNLESSPTASGSSVSPGLYSKTMTPIYDPINGTPASSTMTWFSDS--------PLTEQNCSILAFSQPPQSPEALADMYQPRSLVDKAKLNAGWLDSSRSLMEQGIQEDEQLLLRFKYYSFFDLNPKYDAVRINQLYEQARWAILLEEIDCTEEEMLIFAALQYHISKLSLSAETQDFAGESEVDEIEAALSNLEVTLEGGK-------ADSLLEDITDIPKLADNLKLFRPKKLLPKAFKQYWFIFKDTSIAYFKNKELEQGEPLEKLNLRGCEVVPDVNVAGRKFGIKLLIPVADGMNEMYLRCDHENQYAQWMAACMLASKGKTMADSSYQPEVLNILSFLRMKN--RNSASQVA--SSLENMDMNPECFVSPRCAKRHKSKQLAARILEAHQNVAQMPLVEAKLRFIQAWQSLPEFGLTYYLVRFKGS-KKDDILGVSYNRLIKIDAATGIPVTTWRFTNIKQWNVNWETRQVVIEFDQNVFTAFTCLSADCKIVHEYIGGYIFLSTRSKDQNETLDEDLFHKLTGG 675
The following BLAST results are available for this feature:
BLAST of TCONS_00001615-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
FERM13.666e-16840.78Fermitin family homolog 1 OS=Homo sapiens GN=FERMT... [more]
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