XLOC_000822 (gene) - C. hemisphaerica

Overview
NameXLOC_000822
Unique NameXLOC_000822
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000011:216538..220191+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_000822 ID=XLOC_000822|Name=XLOC_000822|organism=Clytia hemisphaerica|type=gene|length=3654bp|location=Sequence derived from alignment at sc0000011:216538..220191+ (Clytia hemisphaerica)
AATTAGTGTAACACGAGGTAGTAGTAATTCGGTAATTGCACATATTCAAA
ACAACGCAAAAATACGTTTATCGAATCTTTGCATCGACGAACAGAAAAAA
GAAGTTTGGAAGTAAATCAATTAATAGATTGATGACCACCGCAgtcattt
aaatgacatttgATGACACTCTCCTACGTGGTTGTTATAAACAATGACAG
AGAAATTAATccaatttctaaataaaaagcAGAGTGGTGGAGTGCAAAAC
AAGTCATGTTAAAGGAATATCTTCCTGTTTCGTTTTAAGAGGGAATAGAT
ATTGAtagaaaaacacaaaatcatAACATCAGAAGCTTCGCTGCAGAACA
GAACAGAAAAGTGAATTCAACGCTAAGTAAGACTATTCCAGAAAGGATAC
TGTACTGAATTTTCAGAAATGTTTTTACTGTTTTTGTGCTTAACAAACTA
TGTTTGTTATACAAGTTCAACCGATTTACCGGTTTGGCATATGAAGCCTT
TCGGGAGCCACCGTGAGCCCAATAAAGTGGATGATTCCTTTGTAGATAAC
CTCATTGCTCCAAAAGACTTCGCTGAGAATTATGTTATGAAACGTAAACC
AATCGTGTTGAGAGGTGTTGCCAAAGAATGGCCGGCTTTTAATTTGTGGA
CTGATGAATATTTATCTGAAAAATACGGAAATATGGAAATGCGGATTGAA
GGAAAACGGGAAAAACAGTCCGGAATACCAGCTGGTGATGTTTGTTTAGG
ACGCGACCGCTTGAAGACATTTTTATCCGAATATAAATCAGGAGCAAATA
AATACGTGGTTTCTGAGCTACCAACACCAATGTGGGGTGAAGTGAAAATA
CCTAGCTGTGTGTCCTGTGGTGATTTTCTCAATAATTTTGTGGAAATCGA
TGTTTGGATGAACAGTGATATGGGAAAGAAAGGAAAAGGAGGGAGCAGTA
TTATTCATAAAGATGCTTTTAATACAATAAATTGTGTGGTCAGCGGTAAA
AAGGAATGGAAACTAGTTGAGTTACAATACAATGATTACATGTACCAAGC
ATGGGAAGGACCGATGGATCGTGGGTACGGTGGATACTCTCTGGTCAACT
CCGAAAAGGTGAGAAACGCAATACTTAGAAAAATCTTCCGCTGTAATAAT
AGCCTCTCTATATAATTATTTTAAGAGTGGTTGCTATCATTTTACATCGA
TTGACCAAATTGACTAATTAATTTCAGAGGAAGACTTTTACGGACATGGT
CTTTTTACTCTCGTTGGCTGAACATTTTCTTCTTGCACTTTTTAAGCACT
GAATAAAGTCCTTTAAACTAATAACCTTCCCTGCAGAACCGGCGGAACAC
CCCCAAAAGTGGACAGGTTGAAGGctcaaaataaaatttgctaggaattt
gaggaataaatctcatttgctcaaaagtggggagggtgaagtctccccag
tctccccactTCCGCCGGACCTGCCCCGCCTAATAGTACCTAGTAGCATT
AACTATTCTCACTTTCTCAGTAAAAAATTATATGATCTCGTACTGTCCTC
AACAATCGCACATTTGTCCTTTCTATATACAGGTCGATGCTAAACGATTC
CCAAAAGTCGGAgatataccgaactggcaattCACCACAATCAACGCTGG
AGATTGTCTGTATCTGCCAAGTCAAATGTGGCATCAAGTCAAATCTTACG
GAGCCGAAAATCGAGCTGTGGCTTTCTTGTTTTCACAATTTGAAGGTCAC
AATTCAATCAATACAACAGATTGTGGAAAGACGAATCCAGACCCGGTAAC
TTTGGCAGATGTTGATGTAGATTTGCAATATTCTGGTACCGGTATCATGT
CTATGGGAAACTTTGAGTTGAATGCAATTATGGATGAATTGAAGAAGAAT
TTGGTAGACCCGAAGAAAGGGTACTTGACCAAGAAACGTGTGTTCACTTT
GATTGTCATGAACCATGAGAATGctaacaaaatcaaatcaaaactggTTG
AGAAGGCGAAAGCTATGTATCAACATTTCCTGGAATTGGCTGGTGGTGTG
AAGGAGAATATGGATCAAGCGTTTGTAGATGGGTTAACCAGGGCTCAAAT
CCGACCTTGCTACATATGGCTATTCCCATTAGAGCCCAGTAACACTTATG
ACCATGAGTACAGTTACTTCCTTCCGGAGCGTCTTAGAGAAATGATGAAT
GAATTACCAGGAGAAAATGGCGTTTTACTTAAAAACGCTTTCGTTGAGAT
GTATGTCCAAGAAGGTGGCACTGAGAAATTTGCTCAAGAATTCTGGATCA
ATTTAGCTAACGGTGAAGATGTTCGTGAAATCCATAAAGAAAGTATGAAT
TTGTCCAAAGCTTTAGAGAAATATGAGTACCATCGTAAAGAAGACCCTGA
GAACGAGGAAGAAGATGATGATGCTGTTATTGTCACACCACAAGGACATA
AATCACAACCAAAACACGAGAGAGGTGGGTACGCCGAACGTACTGATGAA
GAAGGGGATGAGGATGCAGGTCGCAAGGAACAGGAACTAAAAGATGAGCT
TTAAATTGAGCATGGATTACAAGGAATTGTAAAATGTATGCGAATTAATA
GCCAATTTCAATTTAAGTTTGTAAATTTGTCTTTGTTCAGTGTGTTAGCC
AATGCATTTTATATAGTTTCTCGATCCTGgccaaacaaaatctttaaaca
gaatttCTGTAAATGGTACCCTAACGGTATCACTACTTAATAAGGTTGAA
ACACTATTAAAcggaaaatttcattgaattattGATCGACCCacattgag
tagtgctaccattagggtaccacttttttgaaactcaaaggTACAGAGTG
CTACCAATGAGGAAGTATAAAGCTCCAAAAAATCACAAGCCCTttcatat
tgaattgacacattATGTGGATCAATCTTAgatagaaaaaggaaaaatcg
cTTTTTGTGTACTTAGAAAAAAATCGAGCTTAGAACAACAATTACACTAC
GAAACCGGAATACTTGTCTAAAACTATAAAACTAAAATCTTCAAGAgtta
aattttcagaatttttcatacaagggattttcaaatttcaaattttcgta
gattttcaaatagaaCTAGTTTAATAAAATTGATGATTAGGAGCAGGGAA
GGACGAAttctctttttccaaaaaagtttcaaGTTGTTTGTTAAGTAGTA
CCGTTGTCTTAGAGTGATTATAGTAATATTTTATCACTATTATTTACATT
tgggtttaattttttttaatacagaAGGTAAATGTATGAAGGTAACCAAT
TATCTCTTGGAATTTTTTACGTTTACTATGTGTTCGGACAAAAATCacag
ggtgaaaaattaatggaaattttagcttgagaaaacgtaAACCTGttgca
tatttttgaaaacagtgtttttcagccagaaacagctgttttgtccagtt
tttgcactttttgaggctcaatatctcgagttaggtactgaaatcaccga
TACTCGCAATTtatctaatcttaattttttgagagctttccaaaaatata
caacaggtctccgttttctcaagctaaaattttcattaatttttgaccct
atgatttttgcctgaaactgtcatatttgtccgaaaattacaccgaagtg
tccg
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00001575TCONS_00001575Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00001575-proteinTCONS_00001575-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000011supercontigsc0000011:216538..220191 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
35.42	35.71	18.53	17.65	105.3	77.67	109.34	113.07	65.71	71.1	37.76	39.7	30.35	33.61	22.18	17.39	31.38	27.82	30.38	40.08	17.74	16.2	34.88	40.5	41.84	42.16	15.63	15.3	38.68	38.34