XLOC_000817 (gene) - C. hemisphaerica

Overview
NameXLOC_000817
Unique NameXLOC_000817
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000011:40587..47975+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_000817 ID=XLOC_000817|Name=XLOC_000817|organism=Clytia hemisphaerica|type=gene|length=7389bp|location=Sequence derived from alignment at sc0000011:40587..47975+ (Clytia hemisphaerica)
ttgtCTGTATTAAATAGatttcatgatgaaatgaattatttgcaaaattt tcaagATAAATAATATTATTGtaatgatttatttttaatgtgaaCTCTTC AgacataaaaaacaaagaaaaaaagaaaagaagaagagaaaTGAATTTCA actttattcattttttattggcaatagtTTTGCTTCAATGTGGTAAGTTT GATGTCATGCTTCCTTTTTTTTGATCAATCTCTAAATAGAGTACTTTCTA CCTACCATTGTAcaatttcaacacttttttaaaaagaagctTTTTCATAC ATTGAGAGTATTTTTATATGTTGAATTAGTTctgatatattttttgattt ttagttaaGGCAGAAACGAATGGTACTTCATTTGTAATTGAAAATGTGAG TTCATCCACACAGACGATTTTCTCTTCAACACCAATTATCCAACAAGATG AttctactactactactactacaaCTCCAATTGTTGAAAGTTCTTCAACG ACAACACAAGTGATACTACAACCATCATCTACAACTACGATTGTGCATCA AACAACAAGCACACAATTACTAAATTCATCAACTACAACAATAATGAAAG AAAATACCACAACAAGCACAGAGACAACACCTCAGCACACATCATCTTCC AGTCTAAATTTGGATATTCCTAAAACATCCTCTGTAATTGAATCATCAAT AGCAACAACTACTACTAATACTCAAACGATGACTACCCAAACCTCTATAG AACAATCACCCTCAGTAAGCAAGAGTACATCCAGCATCTTGCTACCAGAC AGTAGTCTGTCAAATGAGGCATCTTCATCATCAATAAAAAGCTCATCTGT GCTAGAGATGGCCTCTTCACAATCTTTAAATATATCATCAAAAACTTCTA CCAAATCTGCACACCCTTCGCAATCAAGCTTTATGGATGAGTCGAGCATG TCATTAAGGATCAGCAGCTCTATCAGTCTACCTGTTTCTACGACAGAAGC AGTTGAATTGGACAGCTCATCAACTGAATTAATGGAAGAATCTTTATCTA CAATGTTAGTGCcatcaatttcaacaatctcCAGTGATTTCCAGGAAGCA TCTATCACTCAAATTATATCGTCTATGAGCATGCCAGAATTATTAGATTC TGTTTTGTCCTCATTTCCATCATCTGTTGACATGCAATTATCTTCAGCTC CAGTGACATCCAGCTCATCGATCATGATGGAACCAGAAGTAACACAAACT TCATCAGTAACATCAATAATATTCATTCATTCTCAGTCAATGTCTTCAGT ATCTGATGTCAGTTCCTCAAAGGTTATGGAATCTATACCACAGTCACAGT CATCAGCTGCTTCATCTATGCTAGTCTCATCATCGTCAATGGCCATTGTT ATTCCAGATATTACCACATCTTCGTCAAAAGCTATCAGTAAGtggatttt gcttaaatacCATCACTTTTTTATACGttagaattttgaataaaaatgta cATAATCCAGTGTGATTCTAATATGGGTTTACACAAGAACAAAAAGTTTA ttgagaaaatgaaaatctatAATGATGTATAATTcaatttcactttcaat ttaAGTATTGCCAACAAGTTCTTCGAGAATAGCAACATCATCTTCAAGTA ATGAAATAGGTANATTGCCAACAAGTTCTTCAAGAATAGCAACATCATCT TCAAGTAATGAAATAGGTACATATAATTTATGACACTTTATGTATCATTT TTTGCAGAACTCAATCAtcttgaaagattttttctagAACTCTCTTCTTG TTAAAAGTAATATTTTGTTAtctgtttcattttcatttatttttccaGCT CCAAAATTATCTTCCGGCAAACTAAAAACGACTTCATCCACAAAAGTTGC TACCACTTCTTCAAGTGAAATTAGTAAGAAGCACTCATTGCATTCATCAT TCAAAGGTCACAATGTATTTGTCAGGAAATTTAAATCTCTTCAAAATGAT AACGTGAAAAGATGGAATGGGTTAAGAAAAGCTTTTTAATGAGATGACTT GTTGCTTtcatcatagtcattataaaaaacccagGTCTTGTAATGTATTG TTTTATCTTTATTGTCAACTTATAATGACTAAGCTTTGATGGCTGAAAAA AATCTTGATAAGGGTACATTCCCTATTCATATGTATATAACATTGCCAAC GCTTCACATGAAGAACTTGTCCTAATATTGGAAAAGAGACTGAAacctaa tatttttttttagttcttgAAAGCTCTTCATCAAAGCTAATCACCTCATC TTCAAGTATAATAGCAGTTCAGCCAACAAAAGCGCCAACGAGTGGATCAG GCTCCAGCAAAAAGACCATCGGTATTGCAATAGGAATTGCTATTGGACTG ATTGTCATTATTTTAATCATCTGTTTGGTCAGACGTAAAAGAACTTCAGC AAGGTTAGAATTTTATGTCTTGATTATGCAACCTCGTGAAACGAGAAAAA CTATTTAGGTTCAAAACAGACCTTAATAATCCATGATACCATGCTTTGAA GCTTTTTTTTATTCTTGGTGACACTTAAAACATACAAAGTCTTCACAATA TTTCATAGACCATAGTATTGTATAGATCCTCCTCTAGCCAAACCTCTCTG TACAGCTTGGAATTCTTCATTCCATGTCTCAAAAGTTTATTTTACtttgg tatttttttgtttccataATTATTTTGTTCGTTTCTTTTCTGTTATTTAA ATCTCATTGACCTTGCTtgttaagttttcaaagctTAGTTGAATTTTTTA AAGTGTTATTCAGCTTATTCATAACATGTAAAATTGCAGAAATAACATGA AAAACTGTTGCTTTGTTTTTAGTAACAAATATCGACTATATAACAACGAT ATACAAATACCAGGCTTCACAGACTTAGGTGGCACAGTTCGACTGAGCTC AACAAAGTGAGTCCAATATGATTTTATTCCCAAGATACCTATttgatgta cacgtttttttataagaacaaactatataagaacattaaggctttaatgg ccaaaatgttaaaagaactagttaagaacattttaaggctttgtggactc taaaacacccgattttttaagaaaatggacaataatactaaaaaaatggc gaaaataagaacatttttaggctcaaaactcaaaaagttaggaaCTTTAA CGTtaacgaaggcttcaaaaattttggatggttcttataaaaaatatcaa gtgTTGGTGTAATTGTTATTGTTATTCAAATTCATGGAAGGTAATAAACA GATCTTGTAAAGAGAGCTTTCCATATTaaagaattttctcaaaattaatc aattttttaatttttttagtgaATATGAGATGATAGATGCTTCAGAGTCA AGGTATGAGCTTTCTACTGTGTTACGATTTTTAACGTGCACATTTCCAAT TTCAGTGACATTTTTATAATCTCTATTCTTCGACAAACAGCTTCTGACTA TCCATAGAAATCAAGAACTATTTTAATACAAAAGCCTTTCCTTCGAAAAT CGAATGGTTTTTAGTGTTGAtattctgattttaaaataatcGTGATAATC AGATTATCTTTAGAGAAAAGACTGATTAGTTGTGGAGTAAATAATATAAC TTGTTTCAATTCTATCTTTTTTGCAGGGCAAGTGACACACCTTATGAGAC AGATACTGAAGATAGAGGGAATGATATTGAACAAAATGGGTATGCCAAAC TAATTCCTTACACTTTTTGAAGTCTTATGAATGCAGCAAATGAAATGGAG TTTCAGGGGGAAATGAGAGGTGCATGTTCATTCTAAGCCATGCAAAAGAG AATGATAATTGCTTAGAGATGCATGATAAAGAAAAGTTTGTGATgaaaac tattttcaaacattttcgaTATTGGAACACCTTTATTTGAGTCAAGGTGA GAAACTAGAGAAGTTTTGCTATGCTTACTTCCACTTAGTCGACcctttct tcaaaattttctaaaggATAATTCCCTCTTTAAAGAAGAGAGGATGATTA GGGTACCTCACAATTGTTGTTTCCTAATTTGGTATTTAAAACAACGAGTT AATgtagatttttaaagaaaaaaaagagaattttaatCAGAGtagatatt tttagttttttttaaatagatatattttgaaatttataatttaCACTATT TAGATTACTGTAGACTTTTTGCACGGTGGTGATGACCCTATATTCAAATA GATTGGTAAAATGGGCCCTGCAAAACGCATTCTGATTGAGAATGCTATGA TTGTACCTTTGCATAAACTAAAAGTTATCGTTTTATGTTATTGGAATGCT GTCTACTTTTATTCTTCTTGATACTATGTCTTTTTCCACCTCGTGTAGGA ACATACTATTTTGCTGAACATTTCTTCTCCTTTCTTTCTAGCAGCCAGTA CAACTTGACTCAATATTTTGTTTGACATCTCCTCTTTCATTGTGTGGTAT GTAGTTATGTTGCTTAGTGATTCTTTTCTTTCAATTACAGTAGATTTGCT TTGTAACTTTCAACTATGTCTAAGGTTTTTAGGTCTATTATTAGGCTGAT TACTGGAATTTTTCGATAATGCAAACTTCTGAGACTAATTGCTTTCTATT CGTGAAGTAGGGTTTACTTTGTGGCTCCTGTAGACGCTAAACATTGAAAT GTTGTTGAATTCTGTGTTGTTTACCAAATTATTACTTCGCGTTTGTGAAA AGATCACACCATGATCGAAGGTTTATCatgaaattgttttgcttgTAGAT AGAAATCATAACTTTGTTATAATATTAGATGATGCTTATGATTCTTGCTT ATAATTTTTTGATCGTGATCGAAAGTTACATGTTCCTTGTAGTAACCTTT AAAAGTGTGCATGTTGTTCTGACACAGAACGTTATAACAACGTCCATCTG GCATTCCTAACGTTCATAAAACGTCCGATGTTCGTTAAAACTAGGCTGTG TGCCAGTTGGCATTTTATTCTGGTATTTCTTCtgtaaatttcataaattt gtcTAGTTTTAATGTTGTGTGTTACACTTTTAATTTATAATCATGGGCAA GGGTCAAAGGCATgcttctatttgtaaatttgtaATCAAagttttgttat tttcttcttcaatgcAAAGTAAATCATAGACAAAAGATCCTTTTAATCTC TCTGTTTATAAAGTTTGTAATCAAAGAAATTTGTTAATAATGTGTTAGTA AATTTGTAATGAAAATCTAGTTAAATTTTTCATGCTTGTAACCTTCAACC ATGGTCAAAGCATTGTTGAACAATCTTCTGTACGTTAGCCAACTTATGGC ATCTGGCTGTTTGTAAATTTGTAAGCAAAATTAAGTTGTTGTAAACTTTC GCCCTAAATACTACTATAGATTTTATGTATGTGGGCAAAATCATTTGATT TATGCATAATCAAAATTCTTcaatttgtaaatttgaaattgaaagacATG CAAAAGGTTTTCTGTTTGTAATTTTTACAATCAAAACTTTCTCTTTTGAT CTGTAGTCATTGTTCAAGATCTTTTGTTGCTTGTAAATTTGCAATCATGG TCATGTTATATTACGTTTTTCTGTATTTGTAAACTTGAAAAACTAACTCT TTTTCAGTTGTGTCTCTGCTCCTTTCTTACAATGAATTTGATTCGACTTT TAACATTTCTTTAATGTTAAACCATTCAGAACCAAAAGATtctaattcaa tctttttctaaTCATCTTCAACCATCTGCCGACTGATTCNGAAACATTCA GAGAGCTTAAAGATTCTAATTCAATCAATTTCTAATCATCTTCAATCATC TGCCGACTGATTCCTTCTTTTGAAAtacacggttttttataagaacaaac tatctAAGAATACAAGTgtcttcgatggccaaaatatcaattAGGAACAT TTCAAGACTTTGTAGATTGCACAAacatactcacaaaatggtgaaaatga gaacattttaagaacatttttagaattaCAACTTGTAACTtacaaagtta agaacatctgaaggcttgaaaaaattggacgttcttataaaaaaatgacg tGTATAGAGTAAAATGTGACATATTCCCTTAGGCACTTTCGCTACACTTT GAAGTTAGTATTTCTGTATAGCTCTGCAAAAAAATGAGCTGAAATAGCGT gggaaaattgttttcaaaatactgCATACTGTTGAATTTGTAAACCTCCA atgatgatgaaacttaatTATAATTAAACGGTTAATAAAACACCGTTCGG aaaataaaacttctttttcatttttttttgcatgtCGGTTTGTTTATTAG GCTATTGTATAACAAATAAAATATACTATATTGAATCAGTTACAGGCCAG TGGTTGAATTTATATACAAGTTTTTGATCCTGCCGACATGtcatataaaa ttgtttcaatttcttttcttttgtttatgaCTGTGTTTATGATCTTTGCT CTCAGTCCATTACACGATTTCTAGAACTTTTTTTGCCACCCATTGCTTTG TTTTGATGCCTTTTTGAACCATTTTGTAACCCATTTCtatatttgatttt ttacttctttttagTTCGTGATGAACTATAAAGTTTTCtgtacaaaaaca aaatttgctcATTTTAGAAAACCTTCAAAACCTTAGATAGTCATAATTCC GATCTCAATTTCTCGCAGAACGAGACAGTATCCCCCCCCCCNTGAATTCA AACAAGCCTTTATCCGGATCCACTGCAAAACATTCAATCTCTTCAAATAA TTTTACGTCTATTGAGAGGCTCTTTAGTGGTGAATCCGTTGGATCCCCTA TATTTCCATTATTAACCAACCTTGCATTGTTTTTCTTTATCATAACAGTG TGAGCAACCCTAACTATGACATTTTCAACTAACTCTACCTAACATAACAT CATTACGACCGACCAACCACTTACTGACTGAACTAACTTTAATGGTCATC CACTAACCACTTAACAACTGACAGACGAGACATGACAGACAGAACTTAGA GACTGAACTGGACCACTGGACTTGTTTTGTGTAAGGGatgtttgaaatga aattgcCTGGACAATTATTGCTATTGTTTTTGCCGGATAAAACCcagtaa aacttttttccaaagttgtttattttgagctggaaatatgatattcttta ataatttctCACTGCAATTTATCTTTTGCATTTTATTTAGATGGTATCAc caatttaaatattttccttTCACATGATGTTTGTTTTCTTACGAAGTAGG GGCATTCGCATACTAAAACTACAGTATGTTCCGCTTTAAAGTGCACTTAA ACAAATTAGGTCAAATTTTGATATAGATAATTATCTGGC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00001559TCONS_00001559Clytia hemisphaericatranscript
TCONS_00001560TCONS_00001560Clytia hemisphaericatranscript
TCONS_00001561TCONS_00001561Clytia hemisphaericatranscript
TCONS_00001562TCONS_00001562Clytia hemisphaericatranscript
TCONS_00001563TCONS_00001563Clytia hemisphaericatranscript
TCONS_00001564TCONS_00001564Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00001564-proteinTCONS_00001564-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000011supercontigsc0000011:40587..47975 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
4.73 5.3 1 0.43 16.88 14.02 10.21 11.35 7.9 11.82 8.37 4.1 14.36 9.41 3.41 5.04 8.63 10.7 14.38 25.82 6.95 6.27 7.29 8.64 16.23 18.78 37.91 30.04 16.12 15.81