XLOC_000744 (gene) - C. hemisphaerica

Overview
NameXLOC_000744
Unique NameXLOC_000744
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000010:1132911..1139473+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_000744 ID=XLOC_000744|Name=XLOC_000744|organism=Clytia hemisphaerica|type=gene|length=6563bp|location=Sequence derived from alignment at sc0000010:1132911..1139473+ (Clytia hemisphaerica)
tggatctccaggctaaatAAAAGGTAATTTTCTACTCATATCACTACTTT
TGATGcgataggccttttcataaactaCGTCACGAACAACGCTTACATCA
TctctaaaatattgctatggtgaTTGATTCCCAGAGGACATGTTAATAAA
GGCCCGATTTTGGGCCAGTAAAGTTCTTACCCGGCAGGTATTAGGAATAa
cgtttttgacatttttacaatGTGAATCACAAACATCCAGTGTTGGATTT
GAACACTTCTTCACAAATCGAGGCCGTTGGCCTCCATTATGGCTTTCTTT
GTATGAAATTGTCAAGCATCTTGATCCAGAGACACATTCCCTCTGATTAT
CTTCCATTTCTTGCCATAGTTTACAAACTTGTGGATCACCCAATGTTGAA
CAAGTGTAACATTTTACAGCATCCGCTTAAACGTAAGAAGGTATTATATT
ATTACCGATAGATAGATTGAGTAAGCGACACTGCTTCTACTTATAACGTT
TTGACTTTAAAGATGCTGGTTGTCGATTCAAAGTATATAAACGCTAAAAC
TCGAAAGCTGCTGACACGAAAAAATTTTGCAGGACGCGATGCCATGTTGa
ttaattaaaaactccagcatagCAACAATAGCACAAAGGCATAATTAGTA
AACTCGTGTACTAAATATTTCTCATCATGGTTTTGATACTGGAGTCAGTA
GAATTTCTAAACATGACGTTGCAAGAATGATTTGTATGGAAACCTTTAAC
AACATTCTTGAATCATGAATGATAATCCAAGTATATTTTCCTAAACTTCA
CTTATCTTTATCTACTAAGCCACTTAGTGTTTACTTAGTTAcaaagaaaa
aagggaaattcccacgaaatcttacaaccacaaacgatttggaagtgctt
tAAATCAGGTTGAACGGGtctagagttttaactctgagttttaacgctag
acttaagaccttagggtctgaggaactaaaagtccaagaatggtccaata
gggctcagaatatagccttcccgaattgaaatattccaataaatttatca
atttgcccaaaagctttgcccgaactttaaattgctgaaaacgaggaatt
aaccaaaattcccaatatatttcgacccTGATTGTAATTTTATTAATCAG
TAAATCACCTATATTTCTAAGGCCCCTCCACAGCAGTTTGTGtggttgcg
tgaatgggcttttttttACGTGAATGcgtagaaattttgaaaaagctcCA
CGAATGCGTGATTtgaaatgcttttaaagaacagAAGGTGCgagaatttt
gaaaagaaattgcgtgaattttgaaaaaaaagatgcGTCATTGCGTGAAT
TTTTATTACTCACCTTTCTTAAGGACTccgaaaataaaaattgctgCAAC
AAACTTCCCAGTCATTCCTATTTGATTTTGCAAACGTGATGATAACTTAA
GTGactgaaactttctttttctttgactaTGTGGATGTTCTTTTCGTTAA
AAACTACTCGAcatatttttcatcttcttaaTTTCTTatatcttcaaaaa
tatttaacttatttcaattcaaaaattcttttgtaaAGGATTAGTCAATA
ATTTATTATCAAGTTTACAGGGATTCTAAAACAAATTGATGGTTGAAAAT
ATTCCCCCGTTTTCTCCTTAATATGAGTAATcagaaaacgtttttttata
gaaactggctttcagaaaatcaactgAGCTTGAAAACTCTGAGTGGAGAG
ATGGCGCATGGCACGTATTTacttagcctgggaatccaagcgttaaactt
ttttcacagtctagtttatgatatttttgctgctggtttaacgcttggtg
caggtaactcgcctgcagggacatttttccctgcaatgcaggttcgacCT
GATTGGCCAGCctttggcgtattacttagcagtactttcgcgcgcatttt
gataatttcaatgcgcgcgcataatttatggaaaaagctgactctgcaga
aaaaaggaaaacaaatNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNcagactaatctacctgc
accaagctctataattttagaactttgtgaggtgaggtatttttagtttt
ttctaagattatgagcttggattcccaggctagtatTTACTCAAAAGGTC
ATAACACCGTAAGAGAACCTGCCCAGGTTTGCGAAACGCTTTGTGATATT
TTTCATCTAAACTAAGGATAAAAAtctaaatgagcttttgagcgcgCTGA
TTAGTTAACATCAACATCAACTCTCAATCATTTACACAAAGACTAGAACT
ttttcgctttcgctttcgtttttaactaTAAAGCAATTCAgttttggctg
aacaaccaacctcgtccccgtgtatcccaggctttatttacgttactgat
tgacgccagagaataattatctagcgctatcagtaagcatcaaaaagctg
ataatgcgcagggaacgaggttgctgAACAACCATAATAGAccttcataa
attacgttacgaacatcacttgcctcgttttgaaattattgccatggtga
tcaaCTCCAAGTGGATtgtattaaaactacttcctattcataaaaaaacc
atttaatgtctcaagagacataatcaccatagtAATTGTTTggatacgag
gcaagtgatgttcgtgacgtaatttatgacaAGGTCCATCAAGGTCGTAA
TATTCGAGAAAAAACGTAATTTCCCATGAAATCTTACTCACAAATGATTT
GGAAACACTCTTACTTTGATTGGAACTGAAGGGTAGAGCTTTAATTCTGA
GCTTTAATgctagacttaggaccttaggatctggggatccgaaagttaaa
aaatggtccaataaggctcagaatttagcctggaagtctatgaACCCCTC
TCAAATCGAAATATTCTATTATAATCAATAGATAAGTCCAAAAGCAACTT
TCTTGTCCGAGCTCTAAATTTCTAAAGACAAGGAAGTAACCAAAATGCTT
AATATATTTCGACACAGATTACAGGTCAGATTGTCACAATCTGAGTTCGA
TTCCCAATGTGGTATACTACGGTTCACTTGACAAGTGAACACACCTTCGC
CCTGGTCAACCCagaccatgtgaggggaattgagtaccactactctgata
caagagtgtgggtgaaATGTCAGACATTGTGGCGAGGGGTGTCACTCATG
CCCGTTCTACGCCTGTGACGAGCTATATGCTCTGTCACGTAGTTCGAGTG
TCATCACTGTATCATGGTATCTATTTCTCACGTGCACAAAGCCAGCAGTG
CTATCTTATCTTTCAAGACTTTTATCCTGACCAGTAAAACTTATTAGAAT
CGGGGTATCACTTTGGCCAACATCATGcaaagtacatgtttttttttaca
agcattgcacttataagcatatctaggctcaNTATGcaaagtacatgttt
tttttacaagcattgcacttataagcatatttaggctcagatatggggaa
aaattaagcatatggcaggcattacttgagcctacgaaaaatattctttc
cctgattttggctttttttggctggaattttacggattttcagcatttcc
ttaaatttatgctttagatttaaacatcccctcaagcatttttcatcCTT
ATTAAGCTTTCAAACTAaacatctctgagcctgtttttggatttttgtat
gcttataaaaaaaacatgtatatctCTGAAAAGGACCGTGATGGTTTTCT
AAGCAGGGGCTAGATTCTGCATAAAAAGAGAATATTtataaattgagttt
ttaatTTCATTAGGTGCAtccttttctttccttttgtACATTTAAAAGCA
TAGCCATTCAAAAGGCCTGTTGCTTGACTTTCAAAAGcaatagaaaatat
ttatttactcTATGTATACTATACATGCAATTGCGACTGTAGTGcggtgg
tagagcatccggctccGGAGTGCAAGGTCTAGGCTTCAATCTTCGGCCAA
AGACTTCGTACTCGATCCCTCTTTGCTTGGTTCTCAGTAATAAAGTGaat
gatcaagggtaagtggagcaattcaGGGAGAAAAAGTTGCggcctcccct
accttcgggtaaatAGGTATCGAAAGGGACTCGAGGGTTGCCTCCGAAAG
CGGTCGTAGACCTTGCAGTTCttatattcaacatttttagccttaaatCT
AAATCTATAGTtcataaaattagaaaaagttttttgttaatTCAAACAAT
GGATTCCTCCAGAAAATTGGGTTAGATGATTAAATGCCAAGAGGTGTTAA
AATATCTTAATGACCGTAGTGTGTAGTGTCCATTTGATGATATGCAACGC
AAGGGATCGATTTGATGTATGTTTAAGGGTAAACCAGGGGTggtcattga
aaaatataaactaACATGTCTCTTTTTGGAATGATCAAGGGAATACTCTA
AAGTATTTTTGTCAGATTGTAATGAGCTAATTTCAATAAAGCAGaatctc
ttttttttaatggtaGTTCGGTGACTGTTCAGCTATGTAAGGGGAGTAAG
CAGAAAATCGACATCTaagaaaaaaacctttttcatcTCGTAAAACGTTT
TCTGATTACTCATATTAAGGAGAAAACGGGGGAATATTTACAACCATCAA
TTTGTTTTAGAATCCCTGTAAACTTGATAATAAATTATTGACTAATCCTT
TACAAAAGAATTTTTGTATTGAAAtaagttaaatatttttgaagatatAA
GAAAttaagaagatgaaaaatatgTCGAGTAGTTTTAGCTTTTAACGAAA
AGAACATCAACTGGTTCTGCCCACAATACAGTTCAATTTTTTTAGGTGGC
GAGATCTACATGAAATATGGACAAAAttcaagaatatttcaaaatacttt
TCTGGCTGACATTTATCACAGGTCTGTATTTTACACATATCCGCTCACTC
GTGTGGGTGAATCTGAAATGAATAACATCTAACGAAACTGAATCTTAAAC
TAAATAAAAACCATAAAAGCTTCGGGTTTTGACTTTAAGGCATTTGCCGC
AATCCTGTTATTGACTGAGAATCAGCTAATGAAACAAAACCTTTCTGTCG
CAAATTATTTCAGCGCTGTCCCTGTCCCAGTGAAAATGTTGCTATCTTTA
CAACGATGGAGCTTTAAACATAACTTTGTTCTTAGATTCTCTATCGATCG
AATGTTATGAGTGTTCTGGAACTCACACGTATTGCAacaattcaagaaaa
acaacGACGTGCGATGGGCCACAGTATTCCTGCTTGTTGAGTTCGAGCAC
TACCCGTGTTCAAGTTATAAAGAACGGTGCATtaggaaatgaaattttga
caagCGTCACCAAATCGTGCGGTGTGGAAACACAGTCCTCATACTGCAAA
GATAAGCAAGATATGGACCCCAACATGCTTCTATGCCAGGTAGGTTTGTA
TTCTACATTATTCAACTGATACTTTCAAATATTCCTCTAGAGTCAAATAT
CGTACCATTTTTGCTAGTGCCCAGTTTTTTTTAATAGTTCCAAAATAAGC
GCTCATACGCttctgtctcagtgacccggtgaagTTTTTCAAGGTCACTA
AAGGGTTCGGAAAATTCCTAGGCCTAATCTGATAACTGATCACCCACTCT
ACGCCCCAAAATCTCAGAATCTCAGATTTTGTTAGAAGGGATTAACTTTG
AATTTTGTTTCAATATAGTCTAAAGCTTAGACAAGAAAAGGCtgttactt
ttgatagaattcaaattctctctgctgcaaattattttgaaacaGACTTA
CGTTAACAAAGGTAGATTTTAAACTAAGACGGGTGAATAAAGTTAATATA
CCATTTTAATTATTTCTAGACGAATTGGTGTTACAAAGATTTTTGCAATT
TCGATTTGAAGGACATAAAAAAGGGTGCTAAAATACAGACCAATCAAGTT
GACCCTTATGGTTGGCATAAAACTTCAGGAGCAGCACCAATTAAAAAGTA
CACTGTTATTCTGGTTTGGTCATTGTTGGTGGTTTTGCTATTAATTTACT
TTTGAATTAACTGGAATGGTTTTGACCTTGACTATTCCTCGAAATAATGT
CCGTTGATCAATATTCGTTTATTATCCAGAGGCAACCGAGAGATTAGTTT
TGGAGACATTActaattttattgctttttaattgttattAAACTTTTGCT
CGATAATTTTGTA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00001406TCONS_00001406Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00001406-proteinTCONS_00001406-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000010supercontigsc0000010:1132911..1139473 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	0	0	0	0.08	0	0	0	0	0.81	1.56	0.04	0	1.35	1.91	2.33	2.94	4.98	3.34	1.62	1.95	2.7	2.41	0.68	0.47	0	0