XLOC_000668 (gene) - C. hemisphaerica

Overview
NameXLOC_000668
Unique NameXLOC_000668
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000007:1288601..1295729-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_000668 ID=XLOC_000668|Name=XLOC_000668|organism=Clytia hemisphaerica|type=gene|length=7129bp|location=Sequence derived from alignment at sc0000007:1288601..1295729- (Clytia hemisphaerica)
GTGCAATTATGATCACGATTATGACGTTGATTACTAGACTTCATCTCTTT ATCTTTTCAGTCAAATAAAAATCAAAACTTATGTTTCATCGCATCTTGAG ATCTCTTTATAAAGAACAACAACGAAGAGCAAATCGTTTGTACTCCTTAT GGTTCACTAGCAATGGGAATGGTGTACAAAAAGCCATCACCAATGCTGAA AAACTGGTCGGTTATCCAACCTCTTACAGTAGCTTGAAATACTTAGCTGA AGAGGAGCCTGCGAACTTTCTTGGTTTGGCGAAGAAGCTCGTTGGGAGTG GTCATCCTCTTCTATCAACAGCCCGTGACCTGCTCTCGCAAGACCCTCAT ATCGGGCACCATCTTGGTGGATTATGGGTACTGCTTCTCTCCAAAGCTGC TGGTAGTGGTGATGATCTAGATGTTCTGCAAAGTGAATTAGTAAATGGTA TACACCAAAAACAACGAGCTATTGCCGATACTACTGAATTGATCAATACA GGTATTTTCAAGTTTCTATTGTAGGAACTCATGTTAAAACACCTCTGTCT CAGTGCCCCGGTGAGATGTTGTTAGCCAGTGAGGACAAATCAAACGAGCC AATTTATATGAAATTATTTTGTTTAAGATATCAATTGTTTACTCTTAGGT GCCAAATAAACGCCCCCCCCCCCGCTTGTTAATTTTTCGATTTTTTTCCA ACCCCCCCCCCCCCCCGCTTGTTAATTTTTCGATTTTTTTCCAACCCCCC CCCCCCCCCGCTTGTTAATTTTTCGATTTTTTTCCAACCCCCCCCCCCCC CCGCTTGTTAATTTTTCGATTTTTTTCCAACCCCCCCCCCCCCCCGCTTG TTAATTTTTCGATTTTTTTCTCATTCAGTGGGACCTTATTAGGACCCCCC CCCCGTTTATTAATTCTTGAAAAAATTCCCAGCTACAAAAAGGAAAATTC CTTGTTTTACTCTAAAAAGCCTAAATTTAGTCTATTTTGACACCTAAAAG TACAGCAGCTAAAATCCAATAGAGATTCTCAAATTGCAAGTGCTTTCCTC AGTTGGGATTAGAGTTTTCTATAGGTTTTAAATGGGGAAGAATTTCCGGG ATATTTTCTCTCATCGTGGACGATCCTTTGGCCAATTTTACTTTCGACTA TTTTACTCGTAGCTTTTCTGGTGCATCGAAGCATGGTCGATATCGTTGNT CACTATTTTACTCGTAGCTTTTCTGGTGCATCGAAGCATGGTCGATATTG TTCAATCACAATCCAATCAAACTTTGAACCTTGGGAACAAACTATCAGTA CTCGGCGGTGACTTCTTGTTAGCCAAAGCATCTCTCGAACTCGGTAAACT TGAAAACACGAAGGTGGTGGAGATGGTGTCACAAGCGATTGGTCACCTCT CCGAGGGAGCAACCATCGAACGAACGCACTCCTCTTTTGATGATTTGAAA AGTTGGGAGGATTTCATTTTCTTGTTGAGAGGGAGTTTGCTGGCGCACAG TTGCCGCTCTGCTGTTCAGGTGGTCGGACATCCTGAAAAAGTAAGTGAAA GATGAATCTTTTGTTTTACATTATCATTTACCACTGTCTGGCTATCAAGA AATATTAAATGCTACAATAAAAGAAGTTATAGTTTTATTCTACTCTGATC GATTTCTTGTGTGAATGTTTGGTCCATTTTCTGGGTAACTGTTTTTTTTA ATTGTTTTTACTGGAGCTTTTTTAAATTTTCATTAGCCCCCTTCTTACTA GAAATGTGTTTTTTGCACTTCTATTCTTTCATTGTGCAGGTATGTGAAGA TGCTTACAACTTTGGAATGAATTTGGCTCTGGCTCAAAGGTGTGTGGAAG ATATAGAGGTTTACCAAAATAATAAGAAAATTCTTACGAACTCAAATTTC GTATTAATGCTGGCTCGAAATACGTCAAAGGAAATCAATGAGAATTGTAA GGCTATAGACCACCAAGAGCCTGATATAAACTCAACCAAAACACTTAAGA ACACGATAGAACAAGACATGCCAGACATTGTAAACAAGACTCGATTACAC TACGAAGAACATTATTTATCTCGGTGTCGATCAAGTATCGAGTATTTTCC AAATGCGAATTCTGTACAAGCTATAAATGATATTCTCAGCACGTTGTCAC AAGAATAACAGTGAAAAGCATCAGGTATTATTCGTATGTCAAACCTTTCC TCTCTTCCTGTCATCGGCTTATTAGTTTTCTGTCAAGTCCTTTATTTAAA CAATGACGTCAATCTATCAACACCCAAAGGAGGTGGAGACCCCAAATCAT TCAAAAGAGGTATTTACGTAACTCTAAATAGATCGTCTCTTCACAAAATA GAATGCCTAAAATGACGGTATGCATTATACCATCAGCCAAACTTTGGTTA AATAGTTTTATTCACTGTTGATACTGATTCTATTCACCTTCGAAACGGTT TTTTCCGCAACATGAAACTTGGTCGGTTCTTTTTTTACACCCTCAAAAGT CTCTTGAAGGGTTAAAAATTATAGATTAACAATCGAGTCTCTAAAAGGGT CCCAAAATTACGAAATATAAATTATGACTCCCTCAAAGGGTCAAAATTCT CGCAATTTGGATTAAATTTTGGCTGAAAATTAGGAAGATAATCTCTCAAA AGGTCGTAAAAACGTCTAAAAAGGGGCGAATTTCTGTCACCTCGCAAATT AGTACCCTCATCCACTTAACGTCCAAAGTGTCCAAACTTTAGTTTTCAGA CAAACACTAAAAAACTGTATATTGGAAAGAGGATGCCATACTAATTAGTT ATGATGACGTCATTTACATCTTCCTTAGAACTAGGAAATTTGGAAACAGT TGTGGATCCCCGTTTCAACTTCCATACAAGTTATAAATCCTATATTGAGT TCCATTGAAGAAAGTTTGAATGGGAAATAGTTTGCATCGCTGAATGACTA CTTCATAAATTCTTGTATAATTCGTTAAGTAAAATGTTTAAAGCATTTTT CGCATCACTTTTTCGCATACTTTTCCTACAATCGAGTAGTTGTATACTGT TGAGATTAAGTTCAAGCCATATGGATACAGTTAATTTTATTGGCATTGTT GATAACAGCAAATTCAACATGATAATCTTCTTGCGAAATATGTCAGGGTG TTTGCGCTTTTAATCCTATCCAACACAGAATGTATAATTAATTTGTGAAG ATTGTTGCAATTTTCTGGGCTAAAAAAGATGGGTTGAGTTTAGTTGATTG ATATCGATTTAGATCATTACATAAAAGTTGATGCTGTGGACGTAAACCAT CATTTGTTTGACTGTGACAAGACAAGAAATGAAAAATTCCTGTCGTGCTT TTGTCTAAATATACAGACTTTATGTAAAAGAAAATGTCGAAGTTGGTTAC TTTTCGAATTTTGGCAAATGTTCGAGATTGTTCTTTGCTTCATTTGTCAT TAAAATGGTATAAAAGGATGTTTTGAGTCGAAAGTCAAGACACACTCATC ATAAAGATTGGAATAGTGAAGATACACAATTATAACATGTTCAAAATGGT GGCATCCTACATCAAGATTCTCACTCTGGCCTCACTATGTCTCTTATGTC AAGGTAAACTTGCTTTTGATTTCAGATTTTGTTTCAAACTTTCCAGAATG ATTTAAAAGCTTTTTCTCTGATGTCTATCCTCCCTAATTCATTCCCTAAT TCGTTTAGAATCAAAAGTATCAAAACGTTGAAAAGATATTTCTGAGGAAA AAGATAAGATATTTTATAAAAAAGTGAATAATCAAGAGAGAAATGAAGGT TTTTCTGGTTATCCAAAATGCATTTTTCTAATATATAATATGTCTGATTT TAAATCTATGAACAGACCTAGATTTAGATAATAAGATACAGCCCTTTGAC GCAGCCACCATTTTTTTTCATATCCAGGCAAGGGATGTCATTACACAGAA GTCAGTATTGTTCTGGATGTCTCTGGAACCGTTTATCCAACACATTACAA ACAATCATTGAATTTCGTCAACCGAATTCTTTCCATCATCAATATTTCAC CAGAAAGCTCACTTGCTGGTGTGACCACGTTCGCCACCAAAGCTGACGTC AGATTCTTTTGTGATCAACACTCTTCAAGCGAGACTTTGGAGAAATCAAT CATAGGATTACCATACACCTACACTGGTCCTGGTGATATATTCACTAACC TTCGAGATGGACTGGTTAAGGGTCAGCAAGTTTTGACAGGGCGTGGTTGT GGTCGGTTGAACGCCAAACAAATTATGGTTTTAATCAGCGATGGGCGTGC TAATCGTGGAGAAGGAGGTACTTATTCTTTCTCAAAAACTCGCTAGACAT CAGGGTAGGCAAGACAGACAATTACAAACTCTTGTTTTTAGCAATAAGGA CTGATTTCTCTCAACGAACAACGACGACTCCGCTTTGTAACTTGATTTAG CCAAAATCTATGGAATTCATATATTTTATACATTCAAATATTTTTCTTGA GGTCATATTATTTTTTTCTGTTATAAGGTTTTGATGGCATCCGAGAAGAA GCGAAATCGATTCGTGATCAAGGGGTAACCATTGTTGCATTGGGTGTTGG AGAACGTATCAAGATCGACTTGTTGAAGAACATCACTGCAAGTGAAGAGC GTGTCACGACAAGTATTCACTTCGATGAAACCTTCATCAACAATGCTTTG CAAATCTTGAAGAAAGAAAAATGCGGATCTGATAGTAAGTGCAAAATTTC TTCCTCACATATAGCTAATAAGATATGGAAAACCACGTTTTACTACCCTA AAATTTTCTTTATCTGGACAAAGGATGGTCTGGCATCAATTCTTGTCTGT TTGTACAAACCGACGAGAGAAAAGAAGTTATAACAGTATCACCTAGGAAA TTCCTCTCAACCCTTCCTCAAGCTCTAAACAAGAATCTCTATCTTTATCG TTCAGTCAAAACAAAACAATGTCAATGTGAAGTACCAGAGGTGGTGAAAA CGATTTCATCTTCTACGTCTTTCGATCAATCGACCATTGCTTCTTCCAAC AAAGGTAACTACTATTTCTCTCATTTCGTATCACTTAAAATTGAGAATTC TGCTCGTCCAGGTAGGAATCAAAATACATATTACCGAGCTGAAAATATCA AAAATGGTGAATATAAAATATGCTAAATTTAGGTTATTTGCAAAAATAAT AGGGACTTCCCCTTGGGGCATAAGATTTAAAACTTTTCTCTCGACATATT AAGATATTTGGGAAAATTAGAAAACAGAGTCAACGATCGTTGGAATTGGA AAAAAAGAAACAAATCAACCAACTGGTGGCATCTACTAACGAATTTGTGC TCCTTTACTACCTGGGGTTTTGTAGAGGTCTGCAATTCAGACTAATGGGG CTCCTTTTTGACCAGAGAGCATTTCAATCCCATACTTGATCTGAAAGTTA AGATTTCACTTACGTTGTATTGTTTTTATTTTTAGGCTCATGCTATTTGG AGAAGGTAGCGAACGCTTCCAAAGAAACCCAAGTGTTGTACGAAAAACAT CAAGCACAAAAAATCAAAAATGAAGAGTGCATGAAAAGTCTGAAAGAAAT GATTCTCAAAGGGCAGGGAAGTAAAGAAGAATTAGAAACATTGTTGGCAA GTTTTGAGACGTGTGCTCATATGGATTGTCGAATGAAGACTGTCGAAGAG ATAATCAACCAACGAAAAACCTTCCTGAAGAGCGAAACAGCCTCTTGTGA TGATTTTATCAAGAAAACAACCTAGATTCTTATTAAGATTAAATGGGAAT GGCGCCTTGTAACCATTTTCGTTTTGAGATGAAACGTAAAACGAGGCTTG CCTTTATTCTTTGTGAATTGGACTGAACTGCTATAGTTGCTAGTGTTTTT AATTTTTTTTCTGAAATTGTCACTTTGCATTTTACCGTCTTTATTGTATC CATTCGCGCTTCCATTGGGATGAAGTATGAGGTTATCTAGACCCAGGTCC GCTTGAGAAAAGGTACAACAGACCCAGAAACAGCCTGGTATTCCTCTATA ACTTACAAAACTTTGTCAGTATTCGGGACTCACTTTCTACAAGTGATGCT GAGTCTTTGTGGCATCTCTAAAAGTTACATTTTCACAATTGTGTATTATA ACTGTTTATTATAATAATATAATGTATATACATTTTTACTTATCATAAAT TATTCCTAAATTTTGAGAGCTTAATACATGTGGAAATCTGCTTTACTACT TTCGAATTTTTATGCTTTAAAATACCTTAGGCGTACAAACTTTCGCGAGT AGAAACTTTCGCGATTTTCACGAATTTTGGCCCTTTTCGCGAAAGTCTTT AAAAACTCTATGAAGGGCTATTCGCGAAAGTTTATGCTCGCGATAAATTT TTGACAAAATAGGAAATCTGTAAAACTTCAAACTTTGAATGAAATTTAAT TTTTATGGCACTTTTTAGCCTGCTAAATGACTAATAAGTCAAAGGCCAAA TGTTTCAAGCCAATCCAACAAGCCATTTTTTCATGTGAAAATTTTCAATT TAACGTCTTCATGATATTTTCAAAAATATTTTCCCGTCAAATTCGCGAAA GTAAATGTCGTGAATTTCGCGATTTTTCGTCCTTGCGAAAGTTTCTGCTC GCGAAAGTTTGTACGCTTAAAGTACTAGTAATACAATAGTAGATAATTCT TTAAGATTTTTTTGCATATGATCATGGCTAAGGGCTTTAGTTAAGAAAAG AAACAAAAAGATTTGTATTTTGTTCTGAATTTTAGTCTTTTTTCCACCAA AGTAGAGGGTAAGTTGGTGCGCCAGCCGCCAGTTTTCGAATGAAGTCATT GCATTGTTGTTTACATTTTGAAAAGCGCGCGAAATTTTAAAGATTCGCTC TGCGCGAGTTTTGAAACAGACGTGTCTTCTTATTATCTGATATTCCGATG GTGTATTGGCAGCCGCCCACGCCCAGGCTCAGCATTGTTCTTAGGTTGTC TTTTTGTTCTTTTTTTGGCATTTTTTTTAGCCTTGTTGCTATTTGCGGCT CTTGTTATTATTTTTAGGTGATATCCGATTTTTCTACTACCCGGTAAAGG CAAACGAGGGCGGGCGGTCAAAGGTAAGT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00001250TCONS_00001250Clytia hemisphaericatranscript
TCONS_00001249TCONS_00001249Clytia hemisphaericatranscript
TCONS_00001248TCONS_00001248Clytia hemisphaericatranscript
TCONS_00001247TCONS_00001247Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00001248-proteinTCONS_00001248-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000007supercontigsc0000007:1288601..1295729 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
15.84 19.25 7.89 5.15 11.07 11.11 16.48 15.51 20.15 11.85 26.92 19.89 24.49 25.49 11.13 8.88 70.43 45.84 2.43 3.17 5.36 8.03 11.98 11.57 34.82 35.63 14.18 3.59 5.2 5.45