XLOC_000569 (gene) - C. hemisphaerica

Overview
NameXLOC_000569
Unique NameXLOC_000569
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000007:37745..41856+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_000569 ID=XLOC_000569|Name=XLOC_000569|organism=Clytia hemisphaerica|type=gene|length=4112bp|location=Sequence derived from alignment at sc0000007:37745..41856+ (Clytia hemisphaerica)
GACGGGCTTCTCCATACAAAATGATTGTGAGATGTTTGTAAGCCACCCTA
ATGAATTGGGCGGTGGGCATGAATCAGTGTTCGTCGATAAGAATGGGCAG
ATGGAGGAAGCCAAAACACACATACAAGGACTAGCGAAAGACAGCGTCGA
ACATCATCACAATGGTCCGGTTGACGgaccaccaatcaaatttcggacgg
acgaacacgatttgcattctcttctTGGAGACGATGAAGGTTAGTGagat
ttttctttcttcaacTGGTTGTATATTTGAAATGAGCATTCAGAATGATA
ATCAAAAATTCGCGACAGCAANGCTGGTTGTATATTTGAAATGAGTATCA
GAATGATAATCAAAAATTCGCGACAGCAATGTCTCCAAAGCGCAAAACAT
TTCATTTCCGACGAGAAGAATTTACAAGAAAACCTGAAGAATTGAAGGAA
CACGGCATCACATCTTTTGCTTGCGAGCAAtcttatatttttgttttgtt
ccttCAGTAGCGCCGTTCCACCCTCCCCACCATCATTCGTAcgacgaaga
agaagaaggaggaATCACACGAGGTGACGAGGCTTTCGTGAAAACCATCC
AAGAATTGCAAGATTCTGGTTTGAAATTGCATTCTATTCATGAAGATGAA
GTCACACACGATGGTAAGGACGACTTTTATTTGCCATTATAACATTTAAA
AAGTAAACCACTCTCGTGAAATAATCAAAATCtcaatcagtattgaagat
CAATCAAGTTTGCCCGTCGTTTTACCTTCTCTCTCTCTATTCTCTTTTTA
CGTAGAGCGAGGATTTCAACCACACCACGAAGAACGAACGTACCATCACG
AAGATACCCCTGCTGGTTACCACAATGTTTATGAATATCACCATGGTGAT
TTACATGAAGATGAGGGCCACCATGGTGGAGGACATCATCAAGGTCATCA
TGGAGGGCATGGTCACGAAGAGGGGCATCACCATGAAGGTCACCACGACG
AAGGGCACCACGAAGAAGAGCATCATGGCGGACACGGTCACGAAGAACAT
GGAGAGCACCATGAGGAGGAGCACCACGAACACGGCCATGAGGAAGAGGG
ACACCATGGGGAGCATCATGCAGCACCTCAAGATGTGGAGGAGGGTAGTG
GAGATGTGACGGAGGaccaaaagaagaagaagaagaagttaAAACATTAT
GGTTCTTATGCGAGCAATGGAGAATCGAAGAAAGTGGAATTCAGTGAAGA
AGAGAAAAACCCTTATCATAATAAACAAGGTATGAATGTGATGTACTTCT
AGTGTTTTTAGATGGGGGTCAACTGTATCTTATTCGCTCATtaacaaatt
gattttttgagtttttttgtcaGTAAATGGAAgagagagactttgaaaat
tgACCGGCACATTTAATCTCATTTCTTAGAAGCTGAATCAGATGAAAAGA
CAAAAACGAAAGAGGAGGAGGGAGAAGAAGCGAAAggagaaaaagtcaaa
gaagAGAAGGGGAAAGCAGATAATTATGTATTCCTTCTTGGAAAATCAAA
CAAGAAACTGGATGAAGGGAACCTACCAAACGTTTTCAAAGAGCTGGTGC
ATGATGCGAAAGCATTGACAGAAAAACTGAAGGAAAAGAAAGGGAGCAAA
GAagaaacagaagaaaaagaCACCAAATCGAAAAACCTCTCCAAGTTTGG
TGAACTAAAGGATGACACCAAGGAAAGCCATGAAGAAAAAAGTGCAGAAC
AGCAAAATAACAGCAAAAATCTTTCCCATTTCGGTCAGCTCAATCAAAAT
GATAAAGAGGGTACCAAGATGCAATCACCTCATTCACAAACACAAGATGA
TTCTACAGAGCAAACAAAATCCAGTAATAAAAGTGATGAAAAAGAGCAAG
AAAACCCCAAAGAAAACGAAAAGCTCAAATCTAAGCCAGTTGAGCAATCA
AGAATAATCAACATGCTGAAGAAATATATACAGCAGTCAAAAGCTAAGAC
AAAAGAGGCGAGTAAGAAAGAAGGCAAGTTGACAATCGATTATACGTATC
GAGACAAACAACCTCAGATCAATGACTATGATTTGGGTGATCTAGGGGAT
ACCAAGAAAAATCAAAGTTCGTTTACCAAAGACAAGGACGTGGAGCGAGT
AGCGCAACGAATCATCAATAAATTCACCACCAAATCAGGTGACCTTGATC
TACCGAATGATGTTGTGGTAGAGAAAGGTGATGAGAGCATCCTGAACAAT
CACGTCATGAATAAACCTACAAGTGCTCACAAGAAACAAGAAACTTGTTG
TGGAACACACGCAGCTACTATGCATCACACTGCTCCACAAGCACAGGAAA
TCCTTGTAGAGATGCCTCCACCTCCACCTCCACCTCCACCTCCACCTCCA
CCTCCACCGCCCCCTCCTCCTCCATCATGTCCAGCACCCTGTCATGCACC
TGAAACACAACCCGCACCTGATCAACCCATCGAAGATCTTCCAAGCGTTG
ATGAGGAGCAAGAGAAACTTCGAAAGTTATTGgagagaaaacaaaaattg
gATCAACTACAATCAGAATATGAGCATGAATTGGACATCTTCAAGAGTGA
ACTGAACAAAGAAAAGACTACCAAGTCACCACGCAAAGGAAAAACAACTT
CCTCATCCTCGTCAAAAGAAACTCCAGCACAAAAGGATGAAGAGAACCCT
GACGatttgatttttccaaaagaaatgaaTGGGTGTGGTCAAGCACAATC
TGTTGACAAGATGAAGCAATGTTTGAAAGCAAATACTGAAGACGGGGAGG
AAAAACCAGCACCTTCCTTATCCAAGTCATCGGAGAAAGAATCCAAACCA
ACAGAATCCGTCACCAAAGTCACCGGGAAACCCATTGAAAAACCCGCTGG
AACACCGACACGCCCGGTCGCTTATGATAAGGAAAAACAAGAGCAGGAAG
CGGAGAAAGAGTACGAAGAGTTCAAGCACCAAGCCAACGACAAACCCGAC
CAACATTTGAAAGTTGAACATTTGAAGGAGAAAGATAAAATGGACCAGCC
CGTGGAACAGGACGCGGATTCTCAAAGTGTGGATATCTTGGGTAAAGATA
AGCAGAAAAATGAAGAACGAAAAGGGCAGGAGAAAAAGAAGGAAGATCAG
GTTTTTGAAGAGGAAGGAAAAACGCAGGACTCTTTGATGGCAAAACTACA
GGACGATGAGAAGGAGGATAAAAAGATTGAAAGGAAAGAACATTCGAAGG
aggaagaaaatatttcttcaaaGGAAGATTGCAAATCATCATCAAGTGAA
AAAGTTATGGGTGGTGGTTGCGGCGAGCTCATGATCACTTCCGATGAAGA
CCTTCTCAAACCTAAAAACGAAAAGGATAAAGCAAAAATTATCAAACAAA
TTGCCATCTTACAGAAAGCGCTGACTTCATATTACAAGAACACGAAATCG
CCTTCTTCACCGACACCAGTAGTGCTGGTGCATGAAATTAACTTAGTAaa
caatgaaaacaaagaaagtgaaaaagaaacGAAACAATTGAATAAACAAA
TTAATGATCTACAAACTATGTTGaaagaacaaaaacaaagcGAATGTCAA
CCCATCATGACTAAAGTCAAAGGGAAATTAATCCTTGACAAAAACTGCGA
CGACAAAAAGAAACGCTCTCACGTTTCgaacaaaaaatggaaaaaatcac
GTATTACTAAACTAAGGAAACAATTGGGTAACATTAAATAAGGaggcttt
ttttcattttcgcttttgtaaatttgtatatATTCTTAGATCTTAGATTA
CCGATTATTTTTGGAAACAATTTGATGTCGGTCAAAATACCAATCCTCAA
AATGTTTCTTACTACTTTCATAAATAGCCCTCTTCTACGtagcctgaaaa
aaaaatttataaatgaaaaatctctataaaaatataaaaatttaaaacaa
tgaggACTAGGAAAAAAGCTTGGTATGAGAAGCAACTCGagttgaaaatg
aaagtcaCTCTTGGGAGTGTCAAAAGGAGGGAGCAACCTTAAAGAGTTAT
ATTGTAACTATAAGGTTGTAAGGTTGTCTAAGATCTATGACTTGGCATTT
GGTAATTGCTAG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00000944TCONS_00000944Clytia hemisphaericatranscript
TCONS_00000945TCONS_00000945Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00000944-proteinTCONS_00000944-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000007supercontigsc0000007:37745..41856 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	0	0.01	0.48	0.9	0.14	0.07	0.43	0.21	0.67	0.5	0.33	1.86	0.48	0.44	0	0	0.17	0.22	0.24	0.14	0.46	0.37	0.07	0.02	0	0