XLOC_000501 (gene) - C. hemisphaerica

Overview
NameXLOC_000501
Unique NameXLOC_000501
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000005:837079..846764-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_000501 ID=XLOC_000501|Name=XLOC_000501|organism=Clytia hemisphaerica|type=gene|length=9686bp|location=Sequence derived from alignment at sc0000005:837079..846764- (Clytia hemisphaerica)
GAACTTGTGTAGAACCTTTAAGCAAACATTTGATGTTATCAGTAAGCTTT ATGGGGAAACAATGAAGAAATCAACAATCTTGGCAGTGTTTAAAGTTATA TTAGTTTTGGAAGAAACACTAGGGACAGAACCAGGTAAGAGCACATAAAT ATATGGACAGCACTGCAATACAGCATAAAAGACCCGATGAGTTCCCCTTT CATCTCGAAAATTAAAAAAATATCATCCTGCTATCGAAAATACCCTCAAA AGCCCATCCCTATAACAGTCTCCAATATCTCCAATCATCAAAACACCCCT GTGTCACATACCCGCTGGGACCCAAGCCCCACCGGAAAATCTGGCAAAAA TTTCTTCCCCAGTAGAAAAATACCCTAGCATTTTAGCCCCACTGGTAAAT TGACTTATATTTCATCCCCACTCGAAATTAAATGTTTAAAAATTGCACTC CAAAGCAATTCCCACTGGATTTTTTAACCTTTGAGTAAGTGAAATTTCTA TCTCCATTGGGATTTCAATAGGAATTTTTATCCCCACTGAGGAAAAAAGC TCCACCGGGGCTGTACGAGACAGGGGTGTATCAAAAACAAGAGATTTGAG ATCATAGCTCCTTGATTTTATCTTCAATACAATACGTTCTCACTCGTTTC CTGTTTTTTTTTTTAAGAAAGATTATATATTTAAGCGCTTACATATATAA TCTTGCTTAAAAAAACAACAAGAAACGAGTGAGAAGGTATTGTATTGTGC TAGCACGTCAAATTAATTTTTATCAGTGATATATATCTCCTATGGACAGA TTGAGTTAAAAGTAAAACCTTTATGCCATATACCCAAGAAGAAAAAAACT TTATTACTAGAAGGTTTATGAACGATTATTCTTTCATCATTTCAGATGAC AGATCAAATGCCGGTTCACCATATGTTAAAGTAAGATTCACTTTAGATGT TTCCAATTACAACCATGGTAAATTCAATGGACGTCTATCTCTCATTCGTC AAGTTAGAGATGAGGTATGTAAACAATTTACCACGCGGTATAAAAGTCAA ATTCGAACTCAGTTAAGGGACTTTCTTTATACTTTTTATAGTGTTCAAGA AACATTGTATCACGTCCATAAGTAAAATCGAAAAGTGATGCATGTGGCTC TGGCTACGAGATTGGCTAAAAATTTTAACATAACGTTTTATAATAATGAG TGTGTTCGATCGGTCACTTGGAAGACTGTAATATTGGCTTAAACTACTAA CTATCTTAGAAGAAAGCTCCTATTGGAGGTAAATTTCGTGGAAGTGTTTT ACGGCTGAAGTAAGTTTACGGCGGTAGTTTAACGGCACGTAATTTTATTT GATGAGATTGCAATTATTGGCTGTAAAACTGTGCGCATATTATTGTGTTT ATTATTCTCAGTCCGAATCTAATCCTACAACTTTCATACCAGATGTTCCG GGTGATGCAGGACGTTGACCGACATGAGAAAATTGAATTTGATATCAAAC AGTAAGCTATCCTTTATCGACTGGCCGGAGAATATTTCCTTACTCTACCC TAATATTTGAGATAGATTTGGTAATGAATCATATCAAAACATTATGAACA ACGGACCTTTTTGTTACCCCTCTTGGTCCTTAGTACTTGTCCTGTACCTG TGCCCGGTACAATTAGATGAAAAGAATAAACACAATTAAAATTCAATTCC AATCACGTTGAGTTTCTATCCCTACTTTGCTAGGAGATTGTGAATCCCGC AAACTGTATTTACGATTTAAATCCTGCACCAATATAAAACTGGATATTCC ATCCCTGTTAACAAGCTGAGAATGATTCATGTGAATCATTAGCTAGTCGG GTCACCAAGATTAAGACGGATAAACGTATAAAAAATTACATACGCTTATT ATTAGTTTTACAAGATTTTACTCTGTATAGGCTAAATCTTAAAGAGTTGA AAATGGATTTTCGAATGTTACAAGAAAATGCAACAGTAGAGAAGTACCAA GCAGTCAAAGACAGATACCAACAAATTTTGAGCTCAATAGATACCATTTC TAAATATACGTTGAAAGAAAGGTCAACTGAAAACTTTGGTAAGTGAAAAT ACCATGAACATATAAACGACTGGACATCCATCTCCTTTGTTTTTTTGTAG AAAGGGCTGCCAGCTTCGTTGCCGCCTCGTTAAAAGCATAAAATGAAACA ATAGATTTTGATGATATATCACTTGGGAATACCTTGCTAACAACGTCAAA ACTTCGACAAAAGTCTCTGTTGTTCTACCCTTCTCAAGTCGTTTATCTAT ATCATAACAAAGATAACAGAGGCAAAATCATCGTCAGCTTGTCAAAACTC CGACTAATATTTCTAAATTTTGACTTAAAAGTGTCTAATAATTTTAGAGA GTGTCACATTCTAATTTTGATATTCTTATTACACAGGCTCTCAACTGTGG CAAGCTATTTTTTTCAAGTTATAAAAAGAATTATTGAAGTGACAAAAGGG ATTCAAAAGTATACACGCAGTTGAAATTCTACATTTCAGAGTTGAAAATG TTGATAAAATATATTGCAAACTTGTAAAAAAATTCGAAAATAATTTTTTT GTACATTAGGAGTAATGTTCAAGCTCTATCAATTATTTTACCTAAATAAT TCATAGAAATAAAATTATGACGGAATACTGTCAGATTTTTCATACCAATT TTGAAATACAGGCGGCAACGAAGCTCGCTTTAAAGAGACAATAAAAGATA GGCGTCCAGTCGTTTATATGTTCATGAAAATACTAAGCATTTTAATTTGG AACTAAGGGGAAGGCTTCAAGCCATAGGAATATTACATGGGCAGTTGAAG ATTCTTCTCATACACATCTTCTTTCCTGAGTATCCCTTCATTACATTAAA TACGTTTTACGGATAGCCGAAGTATCACAAATTCTTAGGAATAGTTGTGA CGCAAGAAGTAGCTAAAGTATCCTCATCTCACATTTCTACATATGATAAG AACATCCCTGGTGGGAAATCCTACCAATCGAAAAAATTAGTCAGAAAATC ATTTCCACTGACCATAATCTAATCCCATCGGGAACATGAGCTGAAATTTT GAGGATCTCCATTGGAATACGGAGCTGTGAATAATAAAGCTCTTTGACTT GAGAATTCTAACTAAGTCAGGGGTGTGACGCTGCAATAATCAGTTCCGTC CCGATGGACGTTAGCAAATCTTTGCTATAATGAAGAAACTGAAATATTCT AACTTTTTTCTTATTGATATTTTCAACAATCTCACCAAAGGATATTGCCC TGGTGTTACTGAAGGAAAGGAATCATTCAAAGGGCGATATATCTTCCCAA ACTTAATTGTTGGAAGTCAAATCATGTTTCGCTGTGCTTATGGAAAGTCT TCATTTTCAAGATCTTGTTATCTGGGAGCAAATGGTCCCGTGTGGTCCCC GCTTGATTTGAAAAAGTGCGATGCGAAGAGTGCAACTACTCAATCCTTAC TTGAATTGAATCAGGTACGACTTTGCACTACTTGGTAGCTTATTGATCTA GTTTGATCGTTCTGTAATAAAGAGTAATCAAGAAATGAACAGCATAACTT ATTTGCATAAACTTTAAAACAAGTCTATCCTGGTGATTATCGAAACTTTA TGGTAATTGCTTCGGGAAAGTCATCCCTACGAAATTGCTCTTTGGTACCT CATAGGACAGTTGCCAACCACATAATCTAAACAACCTGATGAAAGAAAAA ATAATTTCACTGGCAATGAGAGAGAAGAGAAGCTGACCCTCCGATATCAT CGGACCGGGCCCTATCCCGGGAGATAGTTTCCTACCCCTAGATAGGGAAA TCACAGCGCGTACCAGACATTATACTCTGTGCTCGCGAAAAATCAGAGCC GTGCTATATCGATGATGATACTCGAACATTACGGGATAACCATGCGTTCT CGCAGGTATTGAGCCATATGAGCCCGATGACCACTACACTACTGCGCCTT TACTGGAAATTCTGAAATAAGAATGAAATCATAGAATTTTCCTCTTAGAC ATTGGCAAAATGTGGAGTGGGTAAAGATTGCAGGTTGACTGCATTTAACA CATCTGAACAACTGGATAGAGATATTGCAAGTGCGAATAATCTAACAACT GAGGAAGACATCAACTTGGTGACTGAAATTTTGGGAAATATTGTCAATCA AGCGAATCAACAAAATCAGACAAACGAAGACATGAAAAAGGTAAGCTGTC TCTTCTATTCATATTCAATTATGTTCTGATGTTAATGTATCTAAGGGTAA TGAAAACATATTGTGGGGTTAAACCTGTTAATTTCTAAGCTACATGTTCT TATTAATCTGGGTGATATCGTTCTCCTGTTAACAGAAAACCCAAGGGAGG GTACTTTTCAAATAGGGGTACAGGGATTTATCACCTCCACGAGTCCCAGA TATGTTCGCAAAACACCAAAATATAAAAATCAGTCCCTTGTAGGGTGCCT TTTTAGGGGAATTATGGAAAATTGTTTAGAGAACATTTAGGAATTTCAGT CCCATTCTAGGTCACTTTAAAAAGAAAAACAAGTCCCTTTTTAAATGCTA AATTGACTAATACGATTAAAAAACTCCCAATCTACTTTCTACTTTTTTCA ATCTTCAGATCATGAATAATACAGTCTCAGTCGTTGAGAAAATCTTAGAA GCATCAGATAACATCAAAATAACAGACCAAGAAACTTCACGTCAAAACAG TCAATCAATGCTTCAAAGTTTTGAGAAACTTGCTGAGAAAACATCGAAAG GATTGAAACCTAACGAGTCTACTAGTTTTGAAAGTCAAAACATCGCTGTT GTCACTTCGAATCCATCTTCAGACTTGGATTTAGAGGTATCATCTTTCGA TTCAACTGAAAACTCTGGCGAAATCAGAATCCAACAATCTCAAACAACTA CAACTGGTAATGTATCAGACCCTAGTCTACAGGAAGCTTTTTTAGGGTCA GTCAAAGTTCCTCGGGAAGTGTTACAAGAGTCTGTAGGCTGCCAAGATGG ATTCTATTCTTATCTTATCAAGAATGCAGGATTTCTTTTTCAACCAGAAT TGTCAAACTTTGAATTGAAAGGCAACGTCTTGGGTGCTTCTTGTGGCAGC CAGAAGATAGAGAATTTAAGAAGACCAGTTGTTTTGAAATTTCCAAGACA ACCTGTGGTTGCAGTAATTAGCGAAGACGAAAAAGAAGAGGAAATACCTT TAAATCAATGCGGATATTGGGATACATTGACAGGTATTTCTTCTTTTCAA ATTTGACTTTTTACTCAAAAAGTGCTTGTCAAGTACTGAGACGTGAAAAC CTTTTCTCTGGATTGTCGATGTATAACAATATGGAAATATCTTTACTTGT GTGTGTTTAATTATGAGTCTGAAAATGAGGGGATGAAGCCTCGGAAGGTA TGATGCAATCCCTGACATTATTCCTTGGTATTTCAGGTTCTTGGTCTACC AGAGGAGTTTCCACATCATTAACAAATGATCAAAGCATTGTCGAATGTTC TACTGATCATTTGACAAATTTCGCGATGCTATTGGATGTTTCCCAGACCG GAAGCAATCCGTTGGCTCTTCAAATTATCACGTGGATAGGATGTGGAATC TCATTGGCTGGTTTATTGTTGACAATTGTCTCCTTTGCGATTTTCCGGTA AGGCAGTGTCTTTCTTTTTGATAATCCCATTTGTTGGTGCTTGAATTCGT ATTGAAGTTTGATATAAACAATAGAAATAGATACTTGCAAAGATTTCTCT TTATTCTTAAAAACTTAGTATGCTCTAAAGGTCTATAAAGCAAGTTTTGA CGTAAAGTAGCTCTACTAATTTGTTCAAACACTCTAAAGGTCTATGAAGC AAGTTTTGACGTAAAGTAGCTCTAGTAATTTGTTCAAATGATCTAGTTAC GATGGCCCTTTATACAACATTTCAGGAAAGTTCGAAGGAAATTGGTACCC AAACTACTCATATGTCTAAGCACATCTTTAGCAATGACGTTGATCATATT TCTGGCGGCTGCAGAGAAAACAGAACCTCGCTATCTATGTCAAACAACTG CTGGATTAATACAATATTTCCTGTTATCCATGTTTTGTTGGTCCTCAGTG GAAGCTTTCCATTTGTATTATTCGTTCGTTAAAATCTTTGCTACTGGTAG TGATAGCAGATTCTTCAGAAAGGCTTTACTTTTTGCATATGGTAAGTTAA CTAAAAGAGTAGGTGGATCTCGACATTCAATTCAGATTTTTTCATAGACT GTGTGCATCTACCTGCAGCGTTCTATTTTCTTTCTAGTTTATATGATTTG AATCCTGGAACGCAAATTTTCAATTAAGAAATAGTTTAGCTAAGAATCAT TTTTTTCCTTGACGATAAAGAAGCGATGGTGTCGATTTATTTATGCAATA AATATCCACGTCCCACTCCGTAATTAACAACAGGTCTTGTGAACAGCTAA GTGATCAATTTTTCAATTTAGTATGTAATCTTTTCCTAGGATCGCCAGCA GTAATTGTCGCAGTTACAGCTTCCTTGAGACCTGAAAATTATGGAAATGA CAAATTGTAAGTTAACACCATTAAAAAGCAATTTAGTTTTATTTCCAATA CTCCTGCATCCTAAAGAACTGTAAGTAATTCAAAGTAAACGCGCATACCC GTTTGTCAATGGCTGGTTAGGGCCCTCGTCTGTCCAATCAAAAAATTGCC CAAAAATAATTTCGTAAATTTTTTAGAGAAAGAACCTTTGGGAAAACTGA ACTTTCCTGGATCTTGGAAATTCGCTTTTTAGAGAATTACGACGACGATC TCATAATACTTTTTTATTTTTTTTGTTTCAGTTGTGTGGTGAATGGGCTA CCATTTTTCTTGTCGATGCTACTTCCAATCTGTTTGATTCTCAGTGCTAA TATGGTGGTTCTCGTATTAGTTGTCAGGGCAATAACAAAATCGGGTACAA TGGCAGCCAATAAAAATAAACAAGATGGTAACGAAGCTATGAAAAAAGCC AAAATTGCATTTGCTTGTTCAGTCTTATTGGGATTGACTTATATTTTTGG TGTTCTGGCCGTTGGTGCCCTGACGTCTTTTTTCCAATGGTTGTTTTGCA TTTTCAATTCCCTTCAAGGATTCTTTATCTTCTTCTTCTACACTTTCAAT AACCAAGAATTGAAAACAGAATGGATGGATTTCTTGAATATCCAAAAGAA ACAAAACATTGGATCAAGTAAGTATCCCAGCTGACTCTCAACGTTGTCTG AACGAAAAATTACGTTATGGTAAACACATAGACTAGTTTTTTTAACTAAA TGATAATTCTAAGTAGCATTTGCCTTATAGTAAAATCAAATATTGAACAG AACGACACACTTTGCTATTTCACGATTATATTTTAAGAATAATACCCGTC AATACTGTAATTTTACCTCCACCACAGAGCGCCCATCTACTTCCATACAT ATCTATACCATTTCTGTAATATTAGTTTAATTATACACAATGTTTAAGCA GACTTATTCATTTATAATAGAGATTTTGATTGGTCTGCATTATTACCTTG AGAATCTGAAACAGAACCAATTTTGAACGCTAATTCCTAAGTTATGTGGT CATTGAAAAATGCTGAGAACTTTGCGCAATCATGTCAATACCTCGATGTT ACACATTTTTAATGCTTATGGGCCCAGCGCGCAGCGCAATGGGCCTTTAA AACACAACTGGTCGAAAAAAATTGACTTTGTCGCCTATGCGCACAATCAT CAATCGACGATTCCAGGTCAAAATCGAACTACCTGACTTTCTATTGTGTG CATGCGTAAGAAAATACCACATATAATTAATACCTTCAACTTATATGGTC ACATCCTTCTTAATTAGTAGAAAAAAGTTTAACTTAATTAAATCTTTATT GCTCGCCCGACTCGAGTCTATACATTGAAAAAAATCGCTCCTGTTGTATG GCAATTCTGCAGCGGAAAAATATGCTGACAGTGCCAACAACTGCTGGACC TTTACGCCGCATAGGCTTTCTTGTATAAATAGCCATAACTTTCATTAAAG TGCCACCGCAGCAAAACGAACACATAGAGTTAAATTTGCTTTCAAAAGGA ATGGTATTAGCCCTACAGTAATTTTTGACTTTTCATCTAATCTGAGACAA ATTCAGTCTTCAAATGCTAACAAATGTGTCAAGAAAGTATATCACATAAA GTAGATGTTTATAAGGGAAATAAGTATGCTTATATTGTGCACCATTCATT CTTTAATTTGTAGAATATGTTGATATTGTGCGCCATTATATTCATTCACT TGATATTTTGTCGATCACGTTCGAAAGTGAATCTATTTTTAGAATATTAT ATAATTTTCTAGACGTATTTTACACCGTATCTACACTTGCTTTCTAAACT TCATTCCGCATCGACCACCGCTGCTGATGATATAAAAGTTACACTATCTT TTTGTTTAGGTACTGGGGCACCAACTATTCCAATGCGATCAAAGATATCC ACTGCTACTCTTGATGGACGTTGAACACATTAAGCTAGAACTGAAGAAAA AATTCTAATGCAACAAGCATTGTTATGAGCTTAAAGAAAGAGAACTGGAA ATTATTCGGGGTCACACAGCTTTCAACTCTCCTACAGCTTAGTCAAAGTC ACCTGATGCACTTTTAACTATATACCTCCATTTTTATCTTTATAATAGTA ACCGTACGTGTCTGAAACCTCTCTCTGTAGCATCTTGATTTTCGATAGCA ATTCTAAGTCTTTTTCCGGGGCTGATGTTTAATTTTTGTTGTAACAGCAT TGACAATTTTCATGAAAAAGAATTTAAATTAGTTCACCCTGATTAGTGTC CAAGAATAACTTGAAAAAGAAAAATGGAGAATTGAAGTCATAGAAGCATT CCCTCAGCCCCCCCTTGAGTGATTCTTACATTTTAACAATTATAAATCAT TCAATTTTTGCTGGGATAAAACAATTCTCGAAAAACTCTTCATAGAATTA ATTATTCAGCGGTCACTCATTCCGCCAGCATTGGCTCGATGGCTCCTATA TCGATGGTAGTGTGTGAATTTGCTACTTCGAGGAATCAACTAATGTTTAA TAAGGCAATGCAAGTAGTGAGGTCACTTTCGTTTACACCGTCTACTAGCT TCCCTTGCAATACAGAAACAATGCCATCGATTAGGGCCGCCATACAGACA CCTCAATGTTTGCATTGTATTACAGATTACTCAAAAACGGAAACTACTAA AGTGCCTTGAAATTGTATATTATTTCACTTTTGCCAAAAAATTCACTTGT GCTTTTTGAGGAAATTTCCAGACGGTGATAGAAAGTTTTGTGATTCTACA AACGCATTTATTGACAATTAAAGTTTCCCTTGGGAAATGCCTTTAAATCG GCTTTAAATCTAAGGATGAGTTTACAACCGTGAAAGAGGGTGTTTTTCCA CTGACGTCTTAATAAAACGCTGAATAGCCCAAAACTATTCATATTATGGG GAGGAAAAGAGATAATTACACTTGGTTTATGTTTTCTTTTCGAAAATAAA TTTCATTTCCCACAGCAAAACAAGAGAAAATCGAAAAATCTTTTATTTTT TTTCTTATCTTATATTTTTTGAAATGAAAAAGCTCT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00000836TCONS_00000836Clytia hemisphaericatranscript
TCONS_00000835TCONS_00000835Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00000835-proteinTCONS_00000835-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000005supercontigsc0000005:837079..846764 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.02 0 0 0 0.15 0.16 0.36 0.52 0.05 0.06 0.04 0.02 0.14 0.21 0.1 0.13 1.62 1.9 0.04 0.1 5.07 4.92 0.98 1.98 2.21 4.1 0.03 0.02 0 0