XLOC_000453 (gene) - C. hemisphaerica

Overview
NameXLOC_000453
Unique NameXLOC_000453
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000005:889900..894114+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_000453 ID=XLOC_000453|Name=XLOC_000453|organism=Clytia hemisphaerica|type=gene|length=4215bp|location=Sequence derived from alignment at sc0000005:889900..894114+ (Clytia hemisphaerica)
CAAAAAATCTGGTggggatagttttggagtgcaattatttaaattgaatt
ttgaacggggatgaaatcaaagtcaatcttCCAGGggatgaaattgtagg
gtatttttcccttCGGGGACGAGAATTTGGCcgaatttttcagtggggct
gaggtcccagcgggtctgtgatacAGTGGTGTAAGAGATTACCGTCTATT
GGCTAGAGGTTATTGTCGTGTATGTTATGGCAATTGTTGTGGGGTTGATT
ATCATAGATTATCGCTCCTGTATTTTAGTTCTTCTtcctattttcatttt
aaatcaTTGCTATGATCAAGACACTTAAATAAGAGAGTTTTTTTTGCTTG
TCATGTCTTTTAAAACTCCGCTGTATCAGTGCCCTGGTATACGCAGTTGG
GTTTCAAACGCGACCGGTGATCAATGCAcaggttaaaaatattattttga
ggaTTTTCTAGGAGAAGAAAGAGGATAATGAAAAAACTTGAATAGATTAG
TCAATTCATCCCCTCAATCTTAACCGTTTGACATTATCGAATGCAATGGC
TAACAATAAGGTACTATTCAATATTGTCAAGACGATAAAAGTTAGCACAA
ACGTCAGaattttaaattaaagaaatggaagaaaatatttaaaaataact
aaaaagaAATGACAAACTTGAATAATTTTGTcctggaaaaaaaagaaatc
gcAGTCAAACAaagcgttcaattgattcgatttctacgttttttttatat
agaaTTAATAAGATttcgattttgtgctcgttcaTAACGTTAGTGGGGTT
AAAATTTATTacttaaattatataaatatatattttaccaagaaagtttt
attttacCAGTTAGAATAGCCTATGTCGACGGTGAGTTATCGATGAAGAT
AAGGAGTATGAATCTGTTCTTCGGGATATTTCTACGTATTTCATTGGTGA
TTCTGCCAAGCTGTTGTCGTTGTCAACAAATTAAGAGGCTTAGTACGGTG
CAGACAAATAGCAGTGGTAAgactttttagattttaaatgattttttagt
cCTATTGACAATAATTTTACTTGCGAAGGTTTCAATCCATAATCATTCTT
TAGTTTGAGCCAAAACATCGACAGTATAAATTGTTATCATTTTATATTAT
CTTGCCCTTAAGTTAAGGCAAGAATTAAGTAAGTTCATAATAAATAGACA
TGGGTTACGCAATACCAAATTTATATATTCATTTCAACCTTTCAAGTGAA
TTCAAGAGCCGCGTTTTATTTCAGTACAATATGGATTTGCAAATATGGTG
GCCCATGTCAATCACATCCTTGATGTAACACCAATACAAGTTATTACAAG
TAACATAACATCAAACTCGAATTGCATTGCACATTGTATCAATTTTGACA
CGTGCACCAGTACCAATGTTGTAGTACAGAACGCACTAGCCAGTGCTGGC
CACCTTGAATGTCAACTACTGGGCACTGACCGTTTCAGAAATTCTACAAG
TTTTGTTGAACAAATTGGATCGACACATTATGCTATCAGTGTGagtttat
tttaaatttcaataacACATATAGTGGTTCAGGAGGGGGTGCAGTGTACA
AAAGGGCGACATCTATTCTGATGgggtgtgtgtgtgtgtttgttgaaaaa
attgtcatGTACTGTGTCTCTAAGTCTCATTGTTTTTATAGCATGATTGT
GAATGGGAAGATACGTGTATCAATCCATACCATAAATGTATACCACATTA
TGACAATGACACTTATGAATGTCTATGTCCGTTTCAAACCTACGATGAAC
ATTGCATGAATGAGCTAACAGGTATTGTACAATATGGTCATTTTGAGGca
tattttttaatctttttcccTGTAGATTCATTCTATGGTCCTAAGCGAAA
CCTCAaaggaagtttttttttaatttaagatTAACGTTTGtaaactttta
ccaaaaaagatcATAGAACAAtgaattttttgctgaaaatttgaCCTTGG
TttaacccccggggggggggCACTCAAGGTAAATGACCTACCAGACGTTC
GGACCTTAAGGGTAGGTTTTTCATAGTTCAGCTAGTGCACTGTAAGGGTA
GGACATTACAAAACTGCACTGAACTGCACTGTAAGCTTTTGCAATTTTTT
TGGTAAAATTGGCACAAAATTGGTCAATTTTGGAGGAAAAATTCGACATT
TTCTTGGAAAATTGCAAAAATTTTGAAAAAGTGCACTGTAAGGGTACGAT
TTTTCATGGAAATTCACTGCACTGTAAGGGTCTgattttagaagccaaat
tttgggccgaacgtttggtcgttttcagatcgtgtgccccccccccgggg
tttaagaaggattttttttctcatttttcatcttcattctcAAAGCTTTT
GCTGATTATTTCATATTTGATAATGTCTCACTGTtgcatttcttttaaat
aagcATTAAACAGCTATTTAATTCGAGTTCGATCAAAAGTACTGCCGTTA
TTGTCTCCGCTGCAGTTTTTTATGGTGACAGACTTTATTCTACtctttat
ttcaagaaaacatggCAATTCACAAACCTGTACTGATGTCAACAACGTAT
GGAAACCAATACAGTTCGTATTGTACTGATGGCGAATTCGGCCCAGGCTC
CTCAATCTGTCACACAGATAGTAGTAAAAATGGATGGATACAAATCGATC
TTGGATCACGAAAAATCATCACATTCTTAATTTTACATAACCGACAtaca
gaaaatttgaatttattaaGGCGCCTATCACAAACTGATATCAACGTCTT
CGATAGTCCAGGCAACAATCAACGATTTTGTACACACATTGGGGATACTG
TTGCTTTGGTTTATTTTGCTCGATGCACTAAGCCTCTTTTAGCACGGTAC
GTAAAGTTGTCACAACTTGATATTGGATCGTCAAGATACATGAGTCTTGC
TGAAATCATGGTTTATTAATTCcataagaaaaaaaggaaggagGATAATA
CGGAAAATACGGAACTTTTCAAatagattttccaaaaaattgaggggtta
gaataagaatgtcctgggtggatcattttcaaaaaattaattagcagagG
GGcacttattaggtacccgagaataTTTGGCACTTTTAAAGTTGTAAAAG
ATGAGGTACATGAATATGGAATTCAACCCAAAACCTTGGTTGAAGCACTT
TAGCTTGAACATTGATGTATCTAATATCTCACTACTATGACAtggcgcag
tagtgtagtgtGGTTGTTTTCAATCTTGACCACCGTTAAGGAGCTCGAGG
TTCGAAAGTGTGTTGGCAGGTAGTCTAAACTACACTACGTAAGATTCTAG
CGAGACTATTTTGCTCCTCCCCTATTAAAAGAAACAGGAAAGGGGACACT
TGATACACATACTTGTGACGCGCAGTTTTTCGGATCAAGTGCGATAATca
aagagtctgctaaatcacgCGCCCATATTCTTTACGCGCCCATATTTTTT
ACGCGTCTTAGTTTCTACTTATTTATAAgcaatattatttattttgttat
ttaattatttaatttaaaaaggAATCTAAAGTCGTAGCCAACATATATGT
CTAGTTCTTCAGCAGTCACGAGCTGAAGCAGTAAAATCTCAATACTATCA
TAACGAATAGTCCATCAACCTTAAGCATGCCATTTAGTCTTGCTCGTTTT
TGCTTTTCTTCTAATTACCAGTTTACACTTATTTATAAGCAATATTATCT
ATTTgttatttaattatttaatttaaaaaggAATCTAAAGTCGTAGCCAA
CATATATGTCTAGTTCTTCAGCAGTTACGAGCTGAAGTTGTAAAAAAATC
TCAATACTATCATAACAAATAGTCCATCAACCTTAAGCATGCCATTTAGT
CTTGCTCATTTTTGCTTTTCTTCTAATTACCAGTTtacatttatttataa
gcaatattatttattttgttatttaattatttaatttaaaaaggAATCTA
AAGTCGTAAACAACATATATGTCTAGTTCTTCAGCAGTCACGAGCTGAAG
CAGTAAAATCTCAATACTATCATAACGAATAGTCCATCAACCTTAAGCAT
GCCATTTAGTCTTGCTCATTTTTGCTTTTCTTCTAATTACCAGTTTACAC
TTATTTATAagcaatattttttatttgttatttaattatttaatttaaaa
aggAATCTAAAGTCG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00000719TCONS_00000719Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00000719-proteinTCONS_00000719-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000005supercontigsc0000005:889900..894114 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.1	0.07	0.2	0.15	0.59	0.25	0.45	0.37	0.16	0.27	0.09	0.15	2.43	1.84	0.73	0.58	0.95	1.32	4.36	4.27	3.76	3.74	0.55	1.38	1.49	2.09	0.12	0.05	0.01	0.01