XLOC_000345 (gene) - C. hemisphaerica

Overview
NameXLOC_000345
Unique NameXLOC_000345
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000002:1174689..1184409-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_000345 ID=XLOC_000345|Name=XLOC_000345|organism=Clytia hemisphaerica|type=gene|length=9721bp|location=Sequence derived from alignment at sc0000002:1174689..1184409- (Clytia hemisphaerica)
TCTAGATGAGTACACATACTAAATCAATAGAAGAAGAACTAAAAAATCTT
TATTGTTATCTGGAAATCGATGGAGATACCAAATTAACCGTTTTCACCAA
AACTGATGATGGTGACGACAAATCTGTCATGATGTGGTAAGAAAGCTTCA
TTTTTTCCAAGACAGTAGCAAGAGATCAATGATACCTTAAACCATGTTCG
CACGTGACGGTTCCGTTTCGCTCCGAAACGGAATGAAGCCATTCTATTGT
TTAGAAGTGACGTAACACTTGAATGTAACCAATAGAATGACATCATTTAA
TCGTTTCGGAGTGAAACGGAACCGTCACGTGTGAACATGGTCTTATAGGA
ACGTGAACTATGGGAGTGACGAAAATAATTTGTTTTATCGGAAAATATTT
TAGTAGGTACAGAGGTTTTTAGTTACACATTTTCTGCCATTATGGAGGCA
AACGTTGTGTATATGAAACCGGGAGGGACGGAGAGTGACGAAAAATTGTT
TATGGGAAATATTTCTATAGGTACATGTTTGACTGAGCTACGCAGTTTCT
TATGGTAGTAAATGTTCGAATCTGCAGAGGTGATCCATTGCGCAAAGTAA
ATGTTTGCTTTCATAATGGCGGTCATTACGTAACATAACCAAACATGAAC
AACCTCTAGTTGATTTCAGTTTTCCGTCCTTTTCATTCAGCACATGTGAT
GGATGCAATGTTTTCACCTACACACTTTCTGATGGCAACATTACTGACTT
GGTAAGACAAAGAAAGTCCATTTATTTAGACAGACTCCTTTTGTTTTTTT
GTCCAATGTCCAATGTAGGAAGAGAAAATTTCTTTCTGCATCAGTTTTTC
TCTAAAGTGACGACAAAGGCTCATTATGTAAGAAGGTCGTCCAGTTATCA
CTTCATATGGATTTAGTTATGTGTTAGATGATTAATCTTTTTGGTCTGAA
GTACTGTGATGATCTTTTTTAAAAGAGAACGTTTGCCACGAACTGATCTT
CTCGGATCCCTCTTTTGCTTGCAAAAGTAGCTTGAGCGTGCTAAAGCTAT
TTTATTATAAATACAAGATTTCAGGAGGGTAAGAAATGAAATCTTCTTTC
AAATTTATAGGTAGCTGATGGGGGATTCTCAGACAGAAATTCTTTGTTGG
ATCATATCAGGTAAGATTTACATGTTAGTAAAAGCCCTTTTTCAATTACT
CATCATCTGGTTGAGGCTATCACTATGACTCGCTACCAATCCGCCGACTT
GTACCGCAAAAGACTATGTTCGAATCTCAAGAATTTCCAGGAAGGGTGTC
AGGGAAGCATGCTGATAGACTCTCTACCTGTTTTTTTTGTTGATGACATC
ACAACGATAATCTTTTCCCGATATGCCTGAATACCGTACTGTCAGCATCT
TGGTGATACCCCCTTGCCCTTGTTTTGCCTGAACCAAGAGTTGTAAAGAA
GAATTAAGAAATGTTAGCTCTAGTTTAGACGGTCGATTTTTATTCAAATT
GATAGAGTAGGCAGAAAGTGGGCAGAAAAGTGGTTGTTAAAAACTGTGCA
AAAAGATTGAAAGAAGTCAATGAAGTGCCATCAACAGAGGGCTATGCATC
GACTTTAGACAACCAACTTTCTGCCCACTTTAATTCATAATAAACCAGCT
GCGCTGGAAGGTCAGCCTAAATTGCTTAATATGATTAGAAAGATATGTTG
TTAAAAATTGATATGATTTACTAAAACGAGAGTGANNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNCACGCTAAAAGTACGCAAAAAGTTA
ACCCGATCGGAAGAAAGTTTAGAAATCAAAGTGATATCGGGAAATCGGAA
TAAAAAAACCAAACTCTTAAGTTGCGGCTGGAAAAAAGGGATTTGAAGGG
TCATCGGAGCTGACCAATAAGAATAGGCAAGGTGAAAAGTGGGCCGTCTA
AACCAGAGCTAAAATGCCTCGATACTTTATCACAGGAGCTGTTTCCAAAG
CAACACAGTGAAAGCTACCATATTTGATGAGTACGTCATAACACGTTTTG
AAAAGGACAGTCTCTCATTAACGTTGAAATGCCACAGTACAACAGCAGTG
GAACGAAAGACTATCTTACAATACTCCTATCTCAAAATGGCCGACGAACT
AGAAAAATATAAAGCAAGAGTCAAAGGTTTGTTTTTGAAGCTATTACCAG
TATTTGGTTTAATTTTATAGGAAGATAAAATGAGTTTACCGATCTTTCTT
GACTCGCATCAATACTCTTTTTTCATCGAGGCAAATTTTCTCCCTTGCCT
CCGTTAGATTTTGTCAAAATCGATCAAAGCTCAGTTGGCTGAAGCATAGC
TTTCGTATCATTTAAATGATGAGTTCACATCCATTTGTCGCGAGCATTAA
TATGATATATAGTTTTTACCTCTTTTTAAACTTCGAAATTTTGAAATAAA
TTCAGTATAGAGAATTCTGCTAAATAATGTTCAACAACAATATACTCTTT
CGTGCTTAATTATAAAGGGTTAGAATAAGCAGGGGGTGGTGCTCTAGGGA
AAATCCATAAAAGGGGGGGGGGGGGGGGGAATTGGGAAAAATAAAAAAGG
GGGGGGGGGGGGGGGAATTGGGAAAAATAAAAAAGGGGGGGGGGGGGGGG
GAATTGGGAAAAATAAAAAAGGGGGGGGGGGGGGGGGAATTGGGAAAAAT
AAAAAAGGGGGGGGGGGGGGGGGAATTGGGAAAAATAAAAAAGGGGGGGG
GGGGGGGGGAATTGGGAAAAATAAAAAAGGGGGGGGGGGGGGTCAATATT
AATTAATTTTTGGGTGATCTTCCTAAACCCCCTAGAGGAAAATGAAGGTT
TTTTCAGAAAAATTTCATAAAATGGGGGTAATTATGAAATGCTTTTTTTG
TTTTTTTTTCGAAAAATTGCAAAGTGACCCCATCTACAATTAAGCACGAA
AGAGTAAGTAGTTTTTACCTTATTGGTGTCAATTTTTAGAGCTTGAAGAG
AGCAACAATAAAAGAAGTTTTGCAGAACCTTCTACATCCGTTATTACACC
TTCCATCTTTGGTAATATCCCAATGCAATGTTTATTTATCACAATATCAT
AAGATTGGATGATTTGTGGCAAAATATTTACGTGGGAGCTTTTTTCGTTG
CCAAGGTCTTTCCATTGTTCATACAATGTCTTTCCATCGTTCATACAATG
TCTTTCCATCGTTCATACAATGTGTTCCGAAAAAAAGTGGACAAATTTTT
GTATGATGTAAAATCCTCATAATTTATGCCGAATTTCATGCTTTGTGTAC
TTAAAGTAAAATTTTCAAAATTTGTTTGAGGACTCCAAAATACTCAAAAT
GACTGAAAATCATGTCTGAGGGGGATTTGGAATAGTTTTAATCCTTGAAA
ATAACTTTCAAAGGTCTCTTTAATATTTCAATCTCAAAAACCTCCGCATT
CGGAAGCGATCACAAGGCTCTTCTTTCGATAGCTATCTACACGAAGGTAG
GGGAGGACGTAGGGGAGGACTCCACTTACCCTTGATCCTTCTTTTAATTG
TCAAGTAGAGAGGCATTAAGTAGTCTTTGGCATGACCCGACCGGGGACCT
TGCGCACCGTAGCCGGATGCTCTACCATTGCACTATGGTCTCGATTCTAC
CTCTTTGTTTTTAGTGTGTTTCTTTTTTACATTTTAGAGCCTGACGTGAA
ACGACCCAAAGTTACAAAACCAAAAGTCAACAAAAATAGCAGTATTGTTA
ATCCTGGCGTCAGAAAGTAAGTTCACTCACATATCAAACCTCCAGGGTCA
CCAAAAATGGAGGATTTAAGAATCCAAATTCGAACTCTTAGTAAAAATGA
GGAGGGTGAATAGCCTTTACTGACTGAAGAAACTTTACTTGGGACAAATT
AGAAATGAGACAACCTGATGAGAAAGATATAAAACAAAAGACAAATTTTG
GGTGCGTTTTTTTGGACTTGGAGATTTGTCACTAAAGCTGAAAGAAATAT
AGAATCGAATGGCGCTTCAAATTTTATTATTGGACTTTATTATTGGATAT
TATTTTTACTATTGAAACTCTTTGTAACCGTTGAGAATTTCAAAAGCCAT
TTTTGCCATTGTTGAGAATTCATTTACATACTTCTAGACTAAAATAACTG
TTTTTGCTTCTTATATTTTTTCGTTGTAGGAAGAAAGCAGCGAGAGGAGT
AGTGTTTGATGACTGAATGAAAAAGATAAACCAGAGAGATGTAAGCACAT
TCAAAATTTGTTTTGCTATAATAAGGTACATCGTTAGAATGAGGTACCCG
AAGGAATTTCGCCAAAATTGTCCAAAATAAGTTCTAGCAAAACTGCTGTG
CTACATTAACGAAACTTTTTCCTAGTGTAAACCATTGCGGCTCCATATTA
TTCCCTTTCTCAAAATACTTTCAATGTCTTTTCATCTTCTTGTATTCAGG
TACGCTTTCAGATTCTTTACCCCCGTCCTTTCAAGAGTACCAATTTGATT
GGCTGATTGGAAATATCAAATATCGAAAATTTTGTCGAAGAGAAAAATGT
ATTGGTAGCCAAATAGACTAAGTGGTGAGGACCTAAACTTGTTTAGGAAG
AAAATTTGGCTTTGGAGAACTATGTACCTGAACTTCACTTGGATTTTATT
GTTCATAATTTAATGGAAATCAAAAGCTGATGACTTTTACCATGGAATCA
ATGTACAGTTTTCTGTAGACGAAAACCGAAGATCGATATCGTTGAACTGG
AACGACCAGTATATTAAAAAAGTGGAAAACTTAAAAGTACCTAAAGTATT
AATTCGATATTTTTTACTTTGTCTAAATGGAAATTATGACCGTATTTTAG
CCAAGGAAATGGACCGTAAGGGATCGACCCTTTTCGCCTAAATCTCAACA
AATTTGGCTAAACTTTCTCTGCACTGTGAGAGTCGGATTTCAACGGCCTA
ATTTTCCTAATTTTGGATCGCACGTACGGTTGTTTTTTGAATCGAGAGCC
CCTCCTGGAGCTTTAAAAATATCTATGAGATGCTGTCAAAAAGATCCCGT
TGTAGTAATTATTCTTTTATATGTATGAAAAACCGCTCTATCGGGTATCG
AAATTTTTCCTTACATTGGCCCCTAACGAAGTCTTAAGAGGTACTAAATA
GGCTCTAATTGAAATCAAAGGAAATTTTAGACGATAATCAGTTTATCATT
GGAAAGGTGCATACTCCTTGGACGTAATTCAAACATCGTTTCTAATTTGT
ACTTTCAAACAAAGTAGGACATTTGAGTTCATACCAGAATGGACCAGGAG
AAATCATTTTTAACATAGACCTATTGTATTGATTTGTAGAGGTCAAATTA
AAATGTTTTTTTGCAAAAGTTGGCATTTTTGGATTCGGAATATTACCCAA
TAAAAGTAATCATTTGCACTTTTAGATTATTTATTCTAAATAAACACTGT
AGATTAATTAGAAACTAAGTGATATGTATCCCAAATCTCTATATATTTGG
TAAGCTTTGGCACCCATGCTTTTATTTCCAATCTAGTTCGTTTTTAAAGA
TTTTGGAATTACACAAAAATCATCATCATCATCATGAAGTATTTGGTTTT
GATTGCTTTTATTGCTTTTGCTGCAGCACAGCCTGCTGTAAGTTCTTCAC
CAATTTTTATCATAATTTTCTTTGTAACTTCTTGAAACAGATATTGTCCA
AAGTCGGCTATAAGATTTTCATTGTTCCGGTGAGACAGGGCTGTTAGCTT
GAATTTTTGGAGGATCAAATTATTTTCTTTTGAAAGGAAGGATAAAGTTT
TTTATCCAATGTATCCCCAAATCAAGCCTTAGATTTCTCTAGACCCCTAA
TGGAATTTGATGCTTCGTGCAATCGCATGTCACTTATCAAAATTTGATAT
AGCTCAATTTTTGACGTTTTTGGGCAGTCTCAGAAAAAAAAAATTATTAT
TCATTTTTAGCATAGCCATAACTTTTGTTCTAGTGGACCAAATTAATGAA
TGACCCAAAGTTTAAGTTTATCGTTTTATCTTTTCTCTTTCCAATGGAAT
AAATGTACTTCTGGTACACCCGGTACATTAGCAAAGATGAATGATTTGGA
CAAGAAGGGTGTTTTTTAGATGGTTATATCAGATTTTCTTCCTTAGAATG
ACAAAAGATTCTTCAATAAGATCACCAATTTTGGCAAGAATGTCGTCGAT
GCTGGTAAAGGTGCAGTTGATAAAGTCACCGATTATTTTGGTGGAGATGA
CAAACCCTCAGTATGTATTTATTATTTAGATATTTGCTTATTTCAAAATT
GTTTCAAATTAGTTTTGTGAGGGTACCTAGATTAGGCCAAAATTGTTTGA
ATGAACGAGAATATAAAAGCTCACTTTCAATGTTCATCTGTAACATGTTC
TTCTTAAGCATTAATCTTTATCAACTTGTATTTCTGCGAAAACCACCTAA
AAGTATTTTCTGTTATCGGTACCCAACAATAGAGAGGTTCTTGAAAAACC
TCCGTATAATTCGTATTGTAATGTGTCTTTCGGCATTCTATTTTCAGCTC
AAAGATAGATTGTCTGACTTGAAAGACGAATTGGAATTGATTCGAGTTCA
TAACGAAAAACATATGATGAATGTCACCAACAAAACTAACCATGGTCTTA
ACAGAGTTGCCAATGCTTTGGATAAACTCAATGATAATGCTATGGACAAA
ATTATCTCTGTAAGTTTTTATACGCAACACCTGTTCGTTATTTTCAGACG
GTAGATAATTACCGTTATTTCTCCCACCTTGTTTTTTGACTTTTAAGACT
GGTGATTTTAAGTAGTTTTTTTTTGTGCTTTGACCAGCAAAATTTACCGT
TGGTCCGGGCCTTAATACCGAGTTTATGGTTTATGTATCGGAGGATACTG
AAGACGATGGTATAAGTGAAATCGATACAAAACAAAGTCGATAGTTGATG
TACGGCTCTATATCGCCTTTGCTCACCTAAACAGACGACGGTAAGTGGAC
CACCAAAGTGGACGGTGATTTTGGAGAATCAACTTTATTTAATACCGTCC
TCCTCGATTTATCTCGAATACATAAACTCGCTAATAAGACACCTGTAAGA
GGTTTGCAATAAAGTGGTATTTATTTTATTAAAATGCTCACGTTAATAAA
TTGCCATTCTTAGGTTAATGTACATTAATTTAGCTACATGTTTTTTCTAC
AAGCATAATGTTTATAAGCATATGCAGGTTCAGTTTTTGGTACCAAACAA
TGGCTCTATTGTTGAGTACAATAGAATGCTAAGCATAATGCGAGCCTGAT
ATAGGGGCAGACACTTTGCTTATAATTATTAAAAAACATGTAGGTATTTC
CAAAATCACTTTCAACGTTTTTTGATTTAGTCTATCCATTCCCAATGTCT
TGCAATCTCCTATGACGAGAAATTTTCCAGTCTCAATTCTTGTTTGAATT
TCTAAATTAACTTTCCCTTCGGGTATCATCTTCTTTTTCAGGTCGAAGAT
GTTTTGAACGACTTGGCTATTCGTCTTGAGGACACTTTGAACAAAGCTTC
AGCTTACATGAGAGACGGTATCGATTATCTTACAGACATGCAAGAAAAAC
ACAAAGAACACTTTCAAGAACACATTGATGGCCTTAAAGGAGATGTTGAA
GACATCAAAGAAGATTAATTTTCTTATTTAATGATGGAAGAATGAAATAT
ACAATGAAATACTCTCCCTTCAAAATAATTTCTTTTGTTGAAGTAATTTC
AAAGTCATTTTTTGCTTACATACGATATCTTCTTGATAAGTATCAAATTC
ATGGCTTTTTTAGAGTTTATGTTATTTGGTTGACTTTCAAAAATTTTCTA
TTTGGCCAAAGCCTCCTTTAC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00000583TCONS_00000583Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00000583-proteinTCONS_00000583-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000002supercontigsc0000002:1174689..1184409 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
5.73	5.38	6.32	5.67	1.02	0.6	1	1.25	1.6	1.36	1.64	1.84	138.21	113.98	2.16	3.01	8.52	11.51	359.33	407.2	98.38	93.63	35.14	38.54	33.19	38.22	1.26	1.13	1.85	2.18