XLOC_000338 (gene) - C. hemisphaerica

Overview
NameXLOC_000338
Unique NameXLOC_000338
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000002:945665..953665-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_000338 ID=XLOC_000338|Name=XLOC_000338|organism=Clytia hemisphaerica|type=gene|length=8001bp|location=Sequence derived from alignment at sc0000002:945665..953665- (Clytia hemisphaerica)
TTTTGATTTGTATCAAAACATTCAATATGGCAGCCGTCTAAAGTCAAAAA GCCAACCGCCAGAACGTGATTATATTTTTAGTTTCTTTGCTTCTTATCTG CCTATTTTCGAGGCAAAGATGTCATTTTTTAATCTAACGAAACTAGGTGT TCAAGATCCAATCAAATCTTCTTTGAAAGAGTGCAAAGAAGACCATCATA AAGAAAGCAAAAAGGATGATGAAGCAAAATCACCACAAAAGAATTGTTCG ACTCCTGAATCATTGCTCAATAAAAATGATACTACTCAAATTGTAGCTCA ATCAAATTCAGAGGCCCAAGGCTCATATGTTAAATACACAGAACGGTTGA CAAAACACCAAAGGACACAGCATGGTAAGAATTAATGATTAACTATCCTT AAAAAAAAAGATCATAATTTTTCAACTCGTTTTCTCCATTTGTATTTTCC ACACACCAACTCCCCCTGGGCCCAGGGCATGCCTAGGTACTTGGGATTTT AAAACAAGCCTGTGAGTCAAAAACAGATAAATTTAGCCAAATTTGGGTGA AAAAAATCCATTTTGAGGCAAATAAATTCAGGTTTTCCGGAAAGTTTTGC CTGTGCTGTGGAAAAACATTGTTCCTCACTTTACACCCTTGCTTAGATTG CACTTCCTCTCATATTTGTTCATTTTAAACCTTCAGTTCACTTTGAAAGC CTGAGTGAAATGCACCTATGGCTGCACCTTATACGAGCATGAATCTGGTA ATGTCACCCAAATAGGTGAAAATTTTTGGAAAAAATAAAGTTTTGAATTT CACTTTCATTCCTGGATAATCTTTTTATTAATGACTTCAATTTTCAGAAA ACATAAATATCAGGGCTTAATCAAACTGGCTTGGTCCAGAAATTTAACCT AGAGTAGTTTATAATCAGACAAATTTGGCAAAAAACTCTTTTTAGTTTAC ACTTCATTTGAGATAAAATTAGCCTGGATATCCAGCCCGTAAACTTTTTT TTGATTTTGATATTTCTTATGTTTACGGTCTGGTTTACCTAGATCGTCTG CATTCTCATCTGAGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNGCATCCAAATAAAAATAACAATAATGGT AGGGAAGAAGTGTGAAGATCAAAACATGGGAATTTTTAGATGTTCTGGTT GTTTTCTTTTCAATTACTTGCTTACACTTAGATATTCTTGTTTTAATCTT CTTAATGACTTGGTTGCATCGTGTAAAGAACTAAAGGTATATCTTTCTTT TGCTTCAATTCTTCTTTTCTGTTTGCCAATTTTGTATTGCTGTTTTGGGT TGGATATTTTGAAAAAATTTTTCTCCAAAATTTACTTTGCACTTTCTGTC TATAAACAGACTTTCCACCACACTGTCTATATTTTATGGTCAAGGCTGCC ATTCTAAATTGATTTATCACTGCTGGGGTACCATCTTGAAATTATGCATG TCATTATGTGCATATATTTATTTGCAGCCATTGGACTCATGCTAGTCTGG AGACCATACTCTGTTACAAAAATATTTCTATGCTGTTAAAATCCCAATAA CTTCACTGAAATACAGAGTATGGAATTATTGACTCGATTCAAATCACTTC AAATCACAAAAGAAAAAACCGTTATTTTTTCAAAACAATTCAAAAGCTTG CGCCACTTCTTGAAACAATAGAGCTGTTTGACGTCATACTTTTGTTTATC AAATCTTAACAATAAGATATTAGCCAATCAAATTCTGCGATTAATTCTTG CATCTTGTATAATTCCCGGCTACTACTGTCTATACTTTGATATTTTTTTG AAACCACANNCTCATGCAGGAAAATCTGTCAACAGGGGTTCACCTGATTT CTAGGTGAACCAAGCTCTATAATTTTAGAACTTTGTCTGGCTGAGGTAAA ACTTATTTTTTCTAAAATTTTGAGCTTGGATATCCAGGCTAAGATAAAAT ATGCATAATCTAATACTTGTCTTAGATTTCAGTCCATGGCTAATATAATA AGCTGCATTGAAAAGCAATTTTTACCGTCCAGTACGACATATTTTTCAAA TTCTGACACTTTTTCCAGAAGAAAATCTAAAATACTAAAAATATTCCCAT AAAGTTTGACTTCATGAAAAGAAAACTGGCTATGATCAGGTAACTTCATT CTAGATTTGAAGGACCCATTATAAGCTTTCAAAAAAACCAAAAGTTTGCT ATATTTCAGTTGATCAATAAAAAATTAGAAAATGAAACCTTGTTGGTTGC GGACNACAAAAGTTTGCTATATTTCAGTTGATCAATAAAAATTAGAAAAT GAAACCTTGTTGGTTGGGGACATAACTTTTTGTCAAATTTACTTTAAAAT CAGCAATAAACATTAAACTGAATTATTTGGCTTTTAATACTTTGCTGTAC TTGAACCAAAATTTAATCATTGAAATTTGTTGCCTTGAAAGGTCTTTGTA ACTATGATTTCCTGAAAATTGAAGATTTATCTGTAAAAGAGAATCCAATC ATATATCATTTTTTGTCATAATCTGATTTTAAAAGTGAGATTTTGAGCTT GACATTAACTGTTATACATTTTTATAATCAGTAAAAATGATTTTTCCTTG AAAAGCCACTCAACCTTTTCAATAGAAAGGGTTAAATGGGTAATAATGCT ATGTTGCGGACATAACTTTTTTACTTCCAGGGTAGAACCGTAGAACATTT TACATCATTTTATTTAAAATTTTGGAGTGTCTTTTTCTTTACCAAAATTT AAGGAATATTTGAGACTAAATCAATATAAAACCAAAAGATTTGGTTTGGT TTGATTTCAGTTATTACATGTTTTTCTTTGAAAAGAACAAAAGAAGACTC AACAATGATATTAAAACTTTCTAATATTTCTAGTAGAAGAACAACCCTAG GGGACACAAAAAATTAAAAAAAGCAAGGAAATGCACGGTACTTACAAATG TAACTCTTTAGTATTGTCAAAGTGTTAGCATAACTGCTTAAGAGGGTTAA AAATCTGATAAATACTTTAATAGTTATGTCCGCAACATACAATTTGCTAC AGAATATGACTCTGTTTTGAACTGTTGGAGCAATTCTAACTAGTCTTTAA GTGAATGTGTAGTAGATTATGTTGTGTGAACACTACACAATGGATTTAAT ATGTAAATTTTTAATGCATAATTTATCCTTTATTCAAGCTCACAGGCTCA AAACCATCATTTTCAAAGAAATAAAAAGTTTATTTTTCTGTTATAATTTT CATTTTGGACCTTAACTTGGCATCAGAGAAAACGCCGTTTTTTTGCAACT TGCTCTAGTTTCCCATTATCTGGGAAGGATTTAAAATGTAAAAACCAGTG AGCTAAAGCTTTTCAATTTTTTTCTGTGTCAAATCTGTGCGGACATAACT TTGTGAACGGAAAAAGTTATGTCCGCAACATTTTTGACTTTATATGCCAA AAAACTTTTTTTGGCAGTACTTACTTTGTTTTTCATTTTTCATATTCTCT GGCTGTGAGAACAACAAAAACCAAGCTGGAGAAAGCATGTTGTTGATGAA TTATTATACAATGATGTTGATCATTTTTTTAAAAACCTTATTTTCCGTTC ACATTTTTCCTCTAGGAAAATTTGAGTACCTGTTATATCAGAAAAAATGA CTGTTTAAAGCTTGCCCGTGTCAAGATTGACCACAATAAGATTTGATATG ACTATATACCTATAGAGATTTCACCAAAGCCTCAAAGTAGGAAAACTAAT AAATCGAAAAGTGGGCCACATTACCAGATTCATCATGCTCATACTTTGAA TATGCCCTCCTATCCTCACGGGGTCCTCTTTTTGGATTTGTTAAAGGCCA GCAATGGTTTAGATTAGTCTGGCAGTTATAGACAAGCAGCTTAGGTCACA AAAAAATTGGACGGGGTGCGAACAATCCCAAACCACTTTTAATTGAAAAT ATACAACCTAAATATCTAGAAACCATCAACCGGAGTTGTTGAAATTATTT ACCGGACCTGTCGAAATACGTATCACAGATTTTAATGCTGTAAAAACGCT ATTATATTGTTTACCTGACTTTTAAGCAAAAAAATGCGCCACAAAACTTC TAAAGGGATTTATATAAAAAAATAACCCGGCACTTTTTAATGAAATTAGC ATTCTCAAAAACTATGAGAAATTGCCTAAAATTTGAGCCATACACGTTTT TTTTTATAAGAACGTCAAATATTTACGAAGCCTTCGGATGTTCTAAGTTT TTTGGATTTGAAGCATTTTTTGAGCATTTTGATGTAATTTCTTAAGAAAT TGCATGTTTTTAAGTCTCCAAAGCCTTAGTATGTTCTTAGAATGTTCCAA AATTTTTGGGCTTCGAAGCCTTATGTTCTTATATAGTTTGTTCTTATAAA AAAAACGTGTAGATGAAAAAATTTGAGACAAGCCAACCTAGAGAACTAAT TTGAAGATCAACTTCCCCAGAAAAAGATCTACGGGGGAGACGAAACCCAC CTAGATCCGCGCACTGCCCGAAAATTTTGCCGGACCTCAAACACTGACAC ATTAACATGTGCGGAATCGTTTTTACTTTAGCGTATAAACAAGGCCTTAA AAATCGAAGCGCTGTCTCAGGAATTGAATGACAAATTTTGGTTGGTTGAT TTAGGGTGCTGCACGCTTTATTTTGTTTCAAACTTTCAAGCTTTAATTAA TAGTCAGCAGGATACCGGGGCGTCAATGTTTTTTATGACTACTAAAAGCA AAACTAGAATTTTTATGAGAAGAAATCTGGACATATTATACACCAATTAA TGTGAGTTTCAGAGTAGATCTAAAAGAATGTTAGCGTCAATTATCTGATA ATATGATGCAGGGTAATTTCCAAGCACTTTTTCTTACAACCGTTTTGGTC TTAAAAATTGAGTGTATCAATGATATATCAAATAATTTGTTAAATTAGCA ATAAATCATAAAATCAAAAACGATAAGAGTCACGGTAGTTTTCAAATGTT TCTTATTTACAGCTAAAATATAAACAGAAATATGCAAAAGGTCAATATTA AATAACCAGTAGTGAAGGGATAGTTTGATAACGTTTGTCTATAAATCAAA AGATGCTCTTTTACAAAATCGAGTTTGAAAACTCAATTCGAAATTGAGTT TTTGCCACCGAATAACGGTGGTAAAAAAGTGCTTGGAAATTACCCTGATA AGATATGGCCATTTGAACTTTTGTTGACGTTATTTGTCTATTTTTCAAAA CAGATCTTTCTCGATTGATGTTGTGAAATCTAATACCGAGTGATCCAAAA AGAACTTTAGGTGTTTGGTGATGTTTTTAGAGCTTTAAAAGTGATCTGCA AGGTTTACCTTGCGTTATTAAAATTTGGGAGGTTCTAACTTAAATTAAAT GTATTACATTTTACATTTTAACAATATTAGTTCAAAAGTTATGATCACTT AAACGTTAAAGTCAAAAATCACTTTTCAAAAATCATTAACATTATATTTT TTCAATGACAAGTTTAATCATGCTCTCTCAGAAATTGCCTCTGTTATCTT AGTAGAGGGCCAAGCCTGGGGTCCCGTGACATCTTTTTTACGACCTAGCC ATTTTTAGCCCATTTTAGTCTTCTTCATGAAAAAGAAAAAGATTGTGTTA CTACGATCATTAAGACATGTCTATTTTCGACCATTTTCGCTTATTTTGAA AAGTGAAATTTCATTTTGAAAACCGATTGTCTCAAAAACTGCTGAACCAA TTTTAAAAAGCAACAGCTCAAAATTTATGTCCCCTCTCCGATGGAGGTAA ATTACATTTTCTTTTTCATGAATTTGGATTTTCACATTTTTCCCCTCGTA TCAAATATAACAAGAATATATAATTGTTCATTAAACCTAAATTTTAGGGT TCAGAAACCTGCATTTTAACGTCCATGGTATACTGTAAAACCTTAACAAC ATAACGTTATGAGCTAAACATTCTCCTAGAACCCAAAGTATTTCGGGTAA CCCATATTTCAGGAGCCATTAAACGTTGAAACAATGTGACTCGATCATAA ATAATTATTAATTGAAAAATAAAGAAACTTTTTAAGCTACAGGCTATTAA CTGTATAACTTCTGGCTATTTCTAATTGATTTCAAAAATCTAAAGTTCAT TTTTAACACTTTGATTGAGATTTTAATTGTATTTTGTTTACAGATCCAAA TGAAATTTACCGCAATCCAGTGACGTCATCACAAGAGTATGGCTGGTGGA GACAAGATGGTGCACCTGAGAGCTTACCATGGACCAAGGTTCCCAATAGT AGTGCAAGAACCAACAGTGAAATGACGAGGTATATGGTTTGATTATGCTA CTCAACCTGTCTACTCAGCTCCCAAACATTTCATCTTCCTTCAGTAGTGC GGTTAATTCTGGAAAAAGCAGTCTTTATCCTGACGTTTACCCTTATTGGA ACTAATTTTCGCGGGTTTTAATTTTAGCGTTTTTCGCGGTTTTTCGTCAA AATCGCGAAAATTTAAACCCGCGAAAAAATTTGAGAGTCGAAAACCGCGA AAATTAATTCCCGCGAAATACAATTTTTTCCAATTTTATCGAAAAATTTG GAAAATCCCTAGGAAAATGAAAGAAATTTGTCCNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNAAACCGCGAAAATTAAAACCCGCGAA ATGCAATTTTTCGGAAATTTTTTTTCGACCGCGAAAATTAGTTCCCGCGA AAATTAGTTCCAATAAGGTAGTAGATCGTCGCTTATACGAACTTTTGAAT CTTTCTATGTTTGGAACTAATTTTTAGTCCCCGTCAAGGGGGGAAACCCT CTTAAAATACCTTCTATAGTTCGAATCACTCTGTAATTCGAACTAATAAG ATTCCTTTTTCGAGTTCGAATTAGCGGGAGTCAAATGTAAAATTGCTACC TCGGTAGCTGCAACCAGCAAATCTGCTCCACATATGTGACTCCCCAAGTG ATTTTGAGTACCTGAAAATTCTTGGAACGGAATCAAGAGCAGCCTAATAG TGATCAAATATTTTTAAACTTTCAGACCATTAGAAAATCTAATTTTGACC AGTCCTGACCGCTCAAGGACGCTCGTGGCTGCTTGTTTGACATGTCTCGG TCGTTCGTTAAGGTTTGAATATAAAAACCATCTGAGAATATATAAGTGTA GGTTTAGCTTTTGAGAAGATGTAACTTTTTTGAACTATGGTATAATTAAT TGATACAATCACAATGTATAGATTGGGGATGAGCTGGAGTTTTACAAGAT ACTTGTCTAATTGGTCATTTAAAGTGATAGAGATGACGCGTTCTTTAGAA AAAGTAATAAGATTCTTTTATTACATCTTAACGACCAACCAAATCAAATA AGAGCTTGTAAAAATTCCAGCTTGTCCCATAGATTGAGGTGTTTTAGGCT CTATGTTTGCAATGTTGTGGTACCTATTTTGCATTATAACGTATGATTTT CCTTATTTTTAGGTTCGTTGACGAAATGACTTTGACAAACAAACATTTCA CATTATTTTAAAGAAATTTTGTTAGGAGATAAAATGTATATAGTGATTTT AATAGATTTTTTTTATTATTAACTCGCTGTAATAATTTTCAGCCAATTTA AACTATTCTTTAAATACTTTATATTTTAACAATATACTATTTCTAACAAC CATGTATATGATATTTCTACGCAATGTCACCTTTTCAAATTTTTAGGGGG AATCTTGGGCTATTTTCTCGTTGATATTTTTATGCCTTTACTGCTGTCAC A
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00000569TCONS_00000569Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00000569-proteinTCONS_00000569-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000002supercontigsc0000002:945665..953665 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
12.51 10.79 4.43 3.26 284.22 221.2 128.95 125.06 53 63.14 41 42.97 7.28 6.11 11.17 14.77 18.78 19.25 8.82 9.3 9.83 9.7 14.06 12.29 139.71 93.52 23.17 21.38 7.01 8.23