XLOC_000113 (gene) - C. hemisphaerica

Overview
NameXLOC_000113
Unique NameXLOC_000113
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000001:1245968..1249651-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_000113 ID=XLOC_000113|Name=XLOC_000113|organism=Clytia hemisphaerica|type=gene|length=3684bp|location=Sequence derived from alignment at sc0000001:1245968..1249651- (Clytia hemisphaerica)
ACATCCTTGTTTGTTGGCCAGTCTGTTAAAGTCAAGAACAATTCTACTGC
TTCTAGTTCTCAAAAGAAGTCTTCCCCTGAAGAGAATATTTTGTTACGAA
ATCGAATCAATGGAAAAGCTGTTAATGCTAAACCTCGAGTAAAGTCGATT
CAAAACGTTCAGCTTCAAATAAAGAATAGCGTTGACAACGTACGTCAAAT
TTCTGTGACAAAGATTCTTTCACCAAAGAATACCACTGTAACCACCTTAA
AAACTCAAACAAGCCTTGATGTACCATCGAATCAATCACGTAAAAACATT
CACAAACATCAATCCAATCTCAGTCAAGACCAATGTTTATTTGAGAAATA
CAAAGCTATTGCCACTGGCAAATACAATGCAAACAATAATATACATCTAG
ATATGCTGGATTCACCGCAGAAGCTTAATCATCCAAGTTTCCAATACCAA
TCAAAATCGACAAACAACCTCCACCTAATGCCCACGATGTCATCAACGAA
TTTGAATCGAGGTTCTGCTTGGAATCTTTATTCTTCTAGATACAATGTAT
ATTTAGATGATAGTTTCCAGTCATTGGAGCAATATCGATCAACTTCCAGT
TTTCAGTCTAAAGGTATTATTTCACTTTTGGAAATTTTCCACTATACTCT
CCCTGGACTCCCTTTCTTGAGGGCAATATTTCTAACTTTGAACGTTATTC
AACGTGTAATGGGGGTATCAGTTTGTTGGTGTGTCAGTATTGATCTTTTT
TTGCGTCGGTATTTCGGTGATCAAAATAACTTATGTCGGTATTTTCAGCT
TGAAACATCGGAAAAGTGGTGCTAAACCAAAGGCTATTTCTCAAAATTTC
CTCTTATCCTCTTATTGGTCCATCGCAGAATGGACCTTTAAAAAGCAACT
GATCGAAAAGATTTTGTCTTTATCGGGGCCTGTGCGCGCAATAAATTAAA
AAGTCCAGGCTAAACCAACCGCCGATCTAGAATTTTTGCCCGCCTACCTG
CGCGATGTTTGACCTATGTTTTGGATTGAATTGGTAGTAGAGTCAAATTT
CCCGGTTAGATTAAAGGGTTGTTTCAGGTAGGGTCAGGTAGGGTTAGGGC
TAGGGTTGGGGTTGGGAGTTAACCCCTGGTTAGGGTTTTAGCCCCGGGTA
CAATCCTGGACAAAAGGTTGTAGACTTTTCAAAAATTGAGAAAAATCTCT
CAAAATGCCCTACTTTCCCCTCTCCCCCCTCTGCAATGTTGTAGTACTGG
TGCTGGCATCGCTACACGGCAATATCAAAACTCATTCTCTATCAACATTG
TGGGGAGAGGAAATTTCTAAAAATCTACAAACCTTTTGTCCATGATTGTA
GAGTTTGGAGTAAATACTATGTTTATAAGCAACTTTGAACGGTTTGAGTG
GTTAAGGCGCTGGCGTTTCAGTCATAGGTGCTTTGTATTTTGTGGGTTCG
AATCCCATCAGCGGCAAAAGTTTCGAAATTTCGGGAAATGCATCAAAAAC
TTTCAAAACTTAGCAATAAAAAGAAAGTGTCAAAGAATAGAAGCTCAGAG
TGGAGGATGGGAAGGAAATTATTTTGCGTCACTTAAGGAACCCGGTACGA
ACNGGAGGATGGGAAGGAAATTTTTTTGCGTCACTTAAGGAACCCGGTAC
GAACGACATTCGGTTATTGCCACGTCAGCTGGACCTTCACGCCGCTCCGG
CTTCTTGTCTCATATTAGAATTTTGTCCCCGACTTTGAATGCTATGCACA
GTTTCTTTTGACGGGCTGTTTTTCTTTATTTACGTTTTTCATGAAAGATG
CTTTGTGCTTTCTTCAGTCGTGGTCAATAGTTTTTCTCCCCAGGCTCTCA
TATAACAATTCTTTCTCAGCACCTTCAGTTGCAACATACCATAAGCTCAT
GATGACGTTGATGGGTTCCAAATAAACGGCCCCACCCGCTTGTTAATTTT
TCGAAAATTTTCCACCCCCCTTCCCCGGACATTATTAGGACCCCATCGTT
TATTGATTTTTAAGAATATTTTCAGCGGTTAAAGAGAAGGCCCCTTATTT
TGCTCTAAATAGCCTGATTTTAGGCTATATAGTTACCTTATTTTTGGGTG
CTCGGAAAAACAATTTCCAACCCCCCCGGCAATTAGGTCCCTTTTTTATT
CAAAATCAATGCGAACTTAGCGAGAACAAAAAAACCATAGTAATCACCCA
GGATCTTGGATGAAGCCGTACCAATCAATGTAATCTCAAAACATCACATA
TATTTCTATATAAGTAGTAATTCATTAAAGTAACTTCAAGAGCATTGTTA
ACTCACAAGAAATACCCTGAGTATCAGAGGTTAAGTTTTCAAAGAAAATA
GTAACCTCTGAAGACAAATAATAGAATTTTATCGCGCATGTGTCAATCTA
ATCACTGTAGAAAAAATCAAAGATGAAGAGCAAATATTACCATATTAATG
TCTAGCAGACTGTATCAGTATGCAGTTTACTATTTACGAATTCCCCAGAA
ATCTCCAAGTTTAGTTGAAATGAGTTTATTTCGAAAGAAATCTTTTACAT
GATCCCCAAATGTATAACAGTAATTACTAAACTTTTAATTATGGAAATGT
CACTTTAATTGAATCGAAATAATAGACAGACTTTATGTTATGATTCTCTA
TCACTGACTCTTTTTACAAAGCATCGATGACTTTTTGTAAGTTGTGTTTT
CAACGACGGGAATAAAAATATCGACTATGACGCTCATCCAAGATCTTGGA
TGGTCGTCATGGTACTTTTGTCTTCGCTGATTGCGCGATGAATAGAATCT
CGATTCGTCGGCACAGCGTAAATATATGATTTTGAGCTGTGCTTTTCACG
GTACACAAGAAAGCCTAAGCAGCTTAGCGTATTTTTTTGCCGTCAGCGGC
CGCAGCCCAACTTCAGCGGTCTAAATCCAAAATAGCGATCGAAATTCATT
TCAGCGGTAAAAACCGATGTTATAAATTGAAGGGGATTTTTAGCGGTCGA
GACTAAACTCAGGTGAATAAATAAACTTCACAGATGAATGATTCTTTACG
CAGCGGAGTAAAGGCCCAGCAGTGTTGGTAGTGTTAAATGGGCAGACTAT
TACTGTTACACGCTGGGAAGATTTCTTTTAAATTCACTTATTATAATGAG
TCTCAGAAGAGTTTTAAATAACTGGAAATAAAAAAATATGTAATCTGCTT
GAGCTTAACATGGTGATATGTGTTTTCCATATTCGAATCTTTTTCGGATA
TCAATGTTATTGAGACTTGCGCGATTGAATTCTTACATTCCGTCTCCACA
GCTTAATTTTCAAAAAAAAAGTTAACCTTTGGAGCTCACGCTACTCTGTT
TCGGTAACATTCTTAAGTTAGAATAATGATACGTTGCGGTTCAGTTAACC
AGAAACAGACTTTGATTTAAAGTTCAGATGTCTACAACGACTATTCTACC
TCTACTATTTTTCCCGAGGCATTATAATTGATACAGATTTTTTTGTTAAT
AACGTAGATACCTTGAACGGCATTCATCAGAGCTACCAAGTAACGTCCGG
AGAATCATTTCGACCCCACCGCACCAGCAGAAAGGACTCGGTGACGAAAA
GAATTACAAAATTCTTGACAAAGGGATTGGGGAGGCATTATACGTACCAT
AAATGGCGATTTCTATCACTCAAAGAAAGTCAGG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00000209TCONS_00000209Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00000209-proteinTCONS_00000209-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000001supercontigsc0000001:1245968..1249651 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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min expression (0 tpm) - - (6.02 tpm) max expressionaGrOo_1GrOo_2FGOo_1FGOo_2EG_1EG_2P1_1P1_2P2_1P2_2P3_1P3_2PoPr_1PoPr_2St_1St_2GO_1GO_2PH_1PH_2BMF_1BMF_2MMF_1MMF_2M_1M_2GEC_1GEC_2GEN_1GEN_2
Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	0	0	0	0	0	0.13	0	0	0.04	0.13	0.14	0	0.05	0.14	0	0.14	0.06	0	6.02	4.65	2.69	2.05	0.08	0	0	0