XLOC_000067 (gene) - C. hemisphaerica

Overview
NameXLOC_000067
Unique NameXLOC_000067
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000001:2445250..2449787+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_000067 ID=XLOC_000067|Name=XLOC_000067|organism=Clytia hemisphaerica|type=gene|length=4538bp|location=Sequence derived from alignment at sc0000001:2445250..2449787+ (Clytia hemisphaerica)
ttttcagaaacttgattaagacgttgtaaatcaaaattgtcattttgaaa
atttctaaattttcagtttggactttgcatcatcgaaaatcttgaaatac
tttataaaaatcataaattttacatccatcgggtcgtaaatttaagggaa
aacacaaatatgttcatagttccccctattaccactaggcttaataattt
aattttaactacacctacgttttgggggccccaaaccaccgttttgacaa
ccaggggtatactgtaaaaattttatcaaacaaatttatgcccaaaaccc
tctaaatcacatttcaaaactatggtcaaaattttgtattcatatcttaa
agatatctcgagaagtcgctaaaattgcaaacctccgtttttggggccat
tagaaaaaagctatctttaagcgatttaaaaatattgttgaaattgaaaa
ttttgaaaaagaacttccaggaaataaagtagagatgttaaagcttttca
tgcagcaaaaatttttgtaaaaccttttttcctctagatttgagagacat
ttcaaatttgattgacgttttgggggccacatactgtagaaCGCTATACC
TTTACCTCTACTATTTATGTCATATTGATTCTCATTCTGTTTTGAGACTC
TCTACAGTAAATTTCTGAGTCGAAATCAGAATTAATCTCTTCCAGTTCCC
GTTCAAACAAAGAGCGACCAGTTTATGCGATTTATTATACACGTGACATA
CACACATAACTGTGTTACCGGTAGATATTCGATTCAATTCTTAACTCATC
ACCCGTTTAAAATTTCTTCTAATTCCTCGTCAGACAGTTTGACGTCCGAA
TACGCTCCAGAATAACTGTTCGTCGACATGGTGATTGCAAAATCGACCTT
GGGTTCGTCCTCGGTTGGTGACTTAATTTCACCAAAATCAGTATTTATAT
CCATTGGTGTTACATGCGACCCACTTGAAGAGGTATCATTCGTTTCAGTC
TTATTAAACATCTGTAAATTGACAGAAGAAGCTTGGAAAACTCCTTTGAT
ATCTTCCTCTTCCTCCATAAGTCTTTTCAAAGGGTTTCCATAATCTTTAA
ATCCAGTTTTATCGTTAGATACGGTACTTGAAAAAGAACCTCCGGCGATT
GCAGTACCTATATCAACTATATCACTCAACGAATCAACATCGTTACTAAA
TCGACGTTCTAGAGTTTGTTGAACGTCGATTGTAGAGTCTTGCTGTTGGT
TTTGGGTGGTAGAGCTGAATTGATCAGACGACATTTGGTTAGGAATAGTT
CCCTGGGAAATTTGTGTCGAATCAAACATGCCATCTTCTTGGGTAGTGTC
CATAGATTGTTGGTCTAAAAGATCCGAATAAAAATCACCGAGTTCGTTAG
CTAAAGCTTGACTGAAAATCGCGTTCGTAGGATCCGCCTTTATGTCTGAT
GTTTTAGTGGTTTGTTGTAAAATGTCAGGGTTGTTTAGAACAGTCTGTTT
TGCTGGTGTACTGTGCGACATGCTACTGCTTTCAGATTTAAGATGAGAAG
ATGTTGCATTCTGGTTGTAATTTGTAGGACTTTCTCTAGCTGTACGCTTT
GAACGTGCTGTAAACGGCTTGTAATAAGGTACGTGCAACAAGGATTTCTT
TCGAAGTTGATCATCTGGAAGATCGCGATTATCCTTACGCCCTTCGCTTG
GGCGGTCGCTATCATTCAATAATCTTCCGTTCGGTAAAATACCATCACTG
CTACAAAGCGAGGTTTTGCGACTCGATTGCCCAGAGTATTGTACAATAAC
ACTACTATTACCAGAGCAAAGCGGTGATTCCAGGGATTCAGGGGTCACGG
GTGCGCTTTCGGATCCAGTTTGCTCGGAGCTAAGATTTTTctgttcattt
ttctttatcgCTTCCTCAAGTGTTGAAACTTTCTCCAGGACCATGAAGTG
GACCTCATGAGACCGACATGTGGGTCGTTCATGTTGATACTGGACCACTG
GGTGTTTTAAATCATCAGCTTCTATCCATAATTTATCTAAAGAACAACAA
TAAGAGCAAATATTATTCCCTGGCAGTATAAATGAGAAAGTAGAAAAGAA
GGGAAACCAAAACAACAGATGAATTCTATCGAACGTGAAAATCCAGATAA
TTAAAGTAACACAATAATAGTAGAGCAGTCCTATTATTCTCTCCTAGGGC
TGCACTGGTAAAGAAACCCCTCAGTTATGCATAACAAGCGCCCCATGCTG
AACCCCCCTACACAAAAATTCTCCCCTAATAACCCTTACCCCTTTCATAT
TGTACCCTTTATCAAACACACAGACAACTTACTTACTCACTTACTTGGTA
CTGNTTGCTTTGAACGTGCTGTAAACGGCTTGTAATAAGGTACGTGCAAC
AAGGATTTCTTTCGAAGTTGATCATTTGGAAGTTCGCCACTGTCCTTACG
CCCTTCAATTGGGCGGTCGCTATCATTCGATAATCTTCCGTTCGGTAAAA
TACCATCACTGCTACAAAGCGAGGTTTTGCGACTCGATTGCCCAGAGTAT
TGTACAATAACACTACTATTTCCAGAGCAAAGCGGTGATTCCAGGGATTC
AGGGGTCACGGGTGCGCTTTCGGATCCAGTTTGCTCGGAGCTAAGATTTT
TctgttcatttttctttatcgCTTCCTCAAGTGTTGAAACTTTCTCCAGG
ACCATGAAGTGGACCTCATGAGACCGACATTTGGGTCGTTCATGTTGATA
CTGGACCACTGGGTGTTTTAAATCATCAGCTTCTATCCATAATTTATCTA
AAGAACAACAATAAGAGCAAATATTATTCCCTGGCAGTATAAATGAGAAA
GTAGAAAAGAAGGGAAACCAAAACAACAGATGAATTCTATCGAACGTGAA
AATCCAGATAATTAAAGTAACACAATAATAGTAGAGCAGTCCTATTATTC
TCCCCTAGGGCTGCACTGGTAAGAAACCCCTCAGTTATGCATAACAAGCG
CCCCATGCTGAACCCCCCTACACAAAAATTCTCCCCTAATAACCCTTACC
CCTTTCATATTGTACCCTTTATCAAACACACAGACAACTTACTTACTCAC
TTACTTGGTACTGTCTAAATAACACAGTGCTCAAATATACTAGTTTGagt
aaaaaaaaacgatttataagttaatttcatactcaaagtttgATGCCATC
TaggatggcaatcttcagtgaaatcaCTCAGCGATCAAATatatagtagt
tttgaaaaggATATGGGTAGTTGGAAAAGGACTTTTCGCGATGTAAGAAG
AGAGAACGCATAAAGTAGAAACATTGATTGaagaatgaaacaaaaaacgG
CGAAATGAAGGAGATTCGATGAAAAGTTATACTGCAAAAGAATCATCGTC
TAAAAGCTGAAAAGCTAGAAAAATATCACGCCGGAAAGATTCATGGCCTT
TATACTTACGACTTTAGCCTGAAAACACTTTCACTTTTAAGAACCCATGT
TAAGTAATGGGGTCTTAAAAGGGGAGAAAGTATTTATCATAAAACTTTCT
AGATATTTTATGTTAACTTTGTTTATAACATCAACCTATAAGATAAAGGG
AAGAGTCAGGATTAAAAGAGTGTACAAGTTGAACTTTACAGCTAAATATA
GCCAaatatagaaaatttgaatgttgTATTTCAACTTCGCCAATAATGGA
ATGGAATGGCTAACCTGTTCATCTTGAGAGAACGAAGTGAAAACAAAATC
CCAAATATTCAAGGCTTGActatatttcaataaaaagtatcgaatgaaaa
atcgaggaaaaatcgagaaatattcgataaaagatcgaagcaaaatcgat
tttgtaaaaattaagtATACTAACCGTTTTTTGAAACGATAAACAAATCG
TTTAGAAGGTGAAAACTTTTCCCAATATCGCGCGCCTTTACAACATTTTA
CTAAAGTTATCGATTTCACAATactaatcttttttattttaaagtttttg
aatctGTTGGGAtaactattttttgaaatttgaaaattttctctagTCTA
TATATACAGAAAACAAAGTCTCAGAAAATTTCGGAACCGAAGGTTAAtta
ttctcaaaaatatttacagtACTTTTTTCTGTGAAGATTTGTTTCaagaa
gaaaacaattttttcagcTCTGGGTTTTCTTCGAATCAGCACATTTAAAA
AGTACTGTTCTAGTTTTGACAGTAGAATGTTGTCTTTGTGTTTTCATAGG
ATGCAAAAAAACAGCTAACTGGTTTAATAGCAGCTTGCATCCTATTTTTA
AAAGACTGGAAGTCCCCTTTCTCAAGAAGTCAGGTTTTGCACACTTATGC
TTAGCTTGACTTCTacaagaaagtttttttcaaaagcaatGGTAGTACCA
GGACAAAACAAGCAAGTTCAAGGTTTCGGACAGAATATTAAAGAGCATTG
GTGAAGATGCACCAAGCACCAAAgcaattttactcaattttgcCTTGAAT
ATTACTGTCAGTAATCTTGAATGCTGGGAATATTGAAT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00000125TCONS_00000125Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000001supercontigsc0000001:2445250..2449787 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.73	0.5	1.2	1.15	5.49	2.15	2.75	4.13	2.98	2.34	2.82	2.19	4.69	4.06	2.54	1.46	2.8	2.12	2.1	2.66	5.94	5	2.58	3.13	2.76	4.04	5.78	3.88	2.93	4.09