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transcript:BL97461_cuf1 (mRNA) - B. lanceolatum

Overview
Nametranscript:BL97461_cuf1
Unique Nametranscript:BL97461_cuf1
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

protein sequence of transcript:BL97461_cuf1

>transcript:BL97461_cuf1-protein ID=transcript:BL97461_cuf1-protein|Name=transcript:BL97461_cuf1|organism=Branchiostoma lanceolatum|type=polypeptide|length=543bp
XCSHYVSGCSTGQKYEYEYMKPLRTHPDVPLEEYPAACVPMPTGEMFTPQ
KAGRLMERLMQFIASQGQIMVRRAQAKGIWDPWKANFSGYLPANERLIEE
WQKDEEFCRQYLQGINPMLVTVCKDQSRIPAEMLGLKGQGKTTLQLMEEN
RLFIVDYAPMLGVPPTPGKFFYAPIVLMYKEQLAGGKSRLNMLGIQLTRD
KGENEVYSPESAKTHPNKYMFAKMHVVSSDNNVHQFLYHLGYTHLGMEPL
VVAMHTHLPPDHPIHRLLLPHFKDTIGINYLARHSLVSRIFPITDPMFAT
STVGGLIMFLEEWRKYNFMDMAFPEELKRRGFDEAGTDGLENYFYRDDGF
KLWNVYKTYVTGMVNHAYTGDKAVQADKALQEFCRMTEGPGHLHGFPREI
STKKLLIDCLTNIIFNVSAQHSAVNFPQYEYYSFIPNRPAQLSMPMPDGP
NDMLESAVLEALPHETNTTLQVLLSYMLSMPSQTAITGVEAMKDVYPDVH
EKFHTQLLDLSKEIKARNEGLKGEGKVAYTYLDPENVAMSIDI
Run BLAST on NCBI

mRNA from alignment at Sc0000311:14607..19144+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>transcript:BL97461_cuf1 ID=transcript:BL97461_cuf1|Name=transcript:BL97461_cuf1|organism=Branchiostoma lanceolatum|type=mRNA|length=4538bp|location=Sequence derived from alignment at Sc0000311:14607..19144+ (Branchiostoma lanceolatum)
NNNGTGTTCACATTATGTTTCTGGTTGTTCCACAGGGCAGAAGTATGAAT ACGAGTACATGAAACCTCTGAGGACTCACCCCGATGTTCCTCTGGAGGAG TATCCCGCCGCCTGTGTTCCCATGCCGACAGGGGAGATGTTCACTCCGCA GAAAGCTGGACGGCTCATGGAACGTCTCATGCAGTTCATCGCATCCCAGG TGTGTGTCATCATTGTTCTGACATGAACATGACAAAACTGCTTAGTAGTA ATTTTTTCATTGCCTTTCGCCAGTCGTACTAAAATCAGTTTTTTTTTTCA AATGATCAGTCCTCTTTTTTACAGCTTCGACGAGAAGTGTGGCATATGAA ATATACTTGCAATGAAATAGATGCTTGTAATGCGTCGATAAAGGATGGAA ACCGCTTGTCTTTTATGCGAGATCAACAGTTTACAGACAAGGGACAAGAG AAGCTGACTGAACCACCGTTGCACAGATTACAATCATGTGTAAATCATGG TTACAATCTACACAGGGCCAGATCATGGTGCGCCGGGCCCAGGCAAAGGG TATCTGGGATCCGTGGAAGGCCAACTTCAGCGGCTACCTTCCTGCTAACG AGAGGCTCATTGAAGAATGGCAGAAAGACGAGGAGTTTTGCCGCCAGTAC CTCCAGGGTCCGTTGCAACATTTTCTTTCTAACACACATAACAAAAGGGA ATTGCAATCGAATTTAAGAAAAAATGGTTTGTCTTTCTTGTTTTCACATT TGTTTAGTAACATGCAACACATCTACTGTATTGTTAATGATTGTATGATA AAACTGTCGTATGCGATACAATGTACTACAATGTGGTATTGCGTGCTTTG ACTGCTTGAACAACGCAAGAGACATAAATTCACACTTAGAATAATTTGGT ACGTTTCAGTAAGAAAGCAAAATAGTCCAAGAAAAGCCACATGGTTATTT CGTTTTATTCAACATCAGGCATCAACCCCATGCTGGTGACCGTGTGTAAG GACCAGAGCCGGATCCCAGCAGAGATGCTTGGCCTGAAAGGACAAGGCAA GACTACACTGCAGCTCATGGAGGAGAACAGGCTCTTCATCGTGGACTACG CACCCATGCTCGGTGTTCCTCCTACTCCGGGCAAATTCTTCTACGCGCCG ATCGTGCTGATGTACAAGGAACAGTTGGCTGGAGGGAAGTCTCGTCTGAA CATGCTCGGCATCCAGCTAACTAGAGACAAAGGTAAGGCATAAGAAGGGA ACGTGTAGCTTTTCCCTTTCAGATTTCCCGCTTACATAAGCCACGTTGTA GTCCTCAGATTGCTATTATACATACATGTGGATTGTCTAAAAGCTAAACC GCTCATTTTGTCATAGGTGAGAACGAAGTGTACTCCCCTGAGAGTGCTAA GACTCACCCCAACAAGTACATGTTCGCCAAGATGCACGTGGTGTCATCTG ATAACAACGTGCACCAGTTCCTATACCATCTGGGCTACACTCATCTCGGC ATGGAGCCGTTAGTGGTCGCCATGCACACCCACCTGCCACCAGACCACCC CATTCACCGCCTGCTGCTGCCGCATTTCAAGGACACCATCGGCATCAACT ACCTGGCCCGCCACTCCCTCGTCTCCAGGATCTTCCCAATCACCGACCCG ATGTTCGCTACTTCCACCGTGGGAGGGCTCATCATGTTCCTCGAGGAGTG GCGCAAGTACAACTTCATGGACATGGCGTAAGTTTTGCAATTCGATATTG AGTTTCGATGTAGCGTCACTTAAACAAGCATGACACGTGTCTTTCATTTT GCATATGGATGGTTAGTATTAACATGGTAAATTCCCTTTGGTCACCAAGC CTTCGATAACCTATATTCTATTATTCTATTAAGTTTCCCTGAAGAGCTGA AACGCCGTGGTTTCGATGAGGCCGGGACGGATGGACTGGAAAACTATTTC TATCGCGATGACGGCTTCAAACTGTGGAACGTCTACAAAACGTACGTGAC GGGGATGGTCAACCATGCGTACACTGGTGACAAAGCTGTGCAAGCTGACA AAGGTTTGCTACCAAATATTTCCACAACCTAAAAATGAATGTGTTTTTTT TTTATTCTTAAGGTAAACAGAAGAAATTAAGAAACAGAGTCTGTATGTAG CATTGACGATACTTTGTTTTCCATCATTTTTTGTTTGTAGCCCTTCAGGA ATTCTGCAGGATGACTGAAGGTCCTGGACATCTTCACGGATTTCCACGTG AGATTTCTACCAAGAAGCTGCTCATCGACTGCCTGACCAACATCATCTTC AACGTGAGCGCGCAGCACTCCGCCGTCAACTTCCCGCAGTATGAGTACTA CTCCTTCATACCCAACAGGTACGGAGAGCTGGAAATATTCTCTTTTAAAA GACATGATTTATTGCATGCTATCGAGGTTTCGAAACGGTAAAATGAATTT ATTACAAACGTCTTGATTATGCAAGTCAATTTACGCTATGTGTAACGTGT GCTGACATGTCATACACGTGTACCGCTCGGACTCGGGGATCAGAAAGTAT TTCAAGCGGACTCTAAAAACACTCATTCCACCCTACCTCACACAGGCCGG CCCAGCTGTCGATGCCGATGCCTGACGGACCGAACGACATGTTGGAGTCC GCTGTACTCGAGGCTCTGCCGCATGAAACGAACACGACTCTTCAGGTCCT CCTGTCGTACATGCTGTCCATGCCCTCCCAGACTGCTATCACTGGGGTAA GATTCTACTTTGAATATCTGTTATGATCCCCATCGTTTGTAAAAGACACG AATTTTTTCAACGTATAGATATTACATTTGTATTCAGAGCCATGATATTT CTGAGTAGCCCCAGTCTAAGTAGTGATTGTAATGGGTCCCGGGTGAAAAA TTTTAGTTCTTGCATCTCATAAGGATACATCATTCTCAGTGTGTCTTATT GCATATTATCATATAGCCAGATGTCGTTGACCAATCAGATGTCTACACAT ACGGGTCATAGTTTTCACNTCAGATGTCTACACAAACGGGTCATAGTTTT CACATATTCACCCCATTTTACGGGTCATTAATGTCCATACAACACTTTTT CCAGGGTTCCCATTGTTTTTTATTCGATTCTAAGGAACTTTCTGATATAG ACAGACTTGTAAAAGCAAAGTGATACATGAATTTAGCGATGATAAAAAGT ATACACGATAAATAACAACATTGATATCATTTCCAAACTGCCCCCTACTT TACACATGGTACAGGCCTCAAAGGAGGCAGCCATCTTGATTTTTTGCGGT GGTGTGACGTTTTTTGATGCATGACAATGGCTATATGATATAACGTTACC GACCCGGAAATAACACATTGTCGGTTATCATAACCACCTCATAGACGACC TCGTCCGCATTGCGGACTCGGTCGATAATTCGGTGGNAATTATTTGGTTA TAGACAATGGGTTATGACACCGTATAGACCAAAGGAAAGCCGGTTATTGA CCCTATATTAGTGACAAGCGTGTTGTTTTTTAATTGTCCTTTCCTTTTAG CGCTAGCCCTCCCTTGGTTCGGTTGGTTGTTGTTGCCTTTTCCTGTAACG TACACCTAATGCTCAGTAAGCATTACATCTCATATGTATAGAATTGCTGT TATTTGGTTAAAACCTACAGTACCTACTTTCAGCGTACTACCAGGTTCTC CTCTGATTCACACCACTACACTGTACAACTACCAGCCTCTAAGTCATTCT ACAGTAACAGCTTTTTTCCACGAACTGCAAAACTCTGGAATTCCCTCCCA GCCCACTGCTTTCCCCCCGAATACAACCTACAAACCTTCAAAACAAACAC ACACCGCCGTCTCTCACCTATGCCACATTAGTTCAATTAGTTCAATGCCG AGAAGTGGCCTCTAACGGCCCTGTATTGAGCGAGATCGTTAAAAAAAAGA CGGACCGATAAGAATGCTTTGTTTGTGTCATGTACAGGTGGAGGCTATGA AAGACGTGTACCCCGATGTCCATGAGAAATTCCACACACAGCTCCTGGAC CTCTCCAAGGAGATCAAGGCTCGTAACGAGGGTCTGAAGGGGGAGGGGAA GGTCGCCTACACCTACCTGGACCCCGAGAACGTCGCCATGAGCATCGACA TCTAAAGCACACCTGTCATCTGGCTGGTGTTTCGTACAGAAACCTCTAAG ATGTTATCAGTGGTGGCAGTACGCTACAGTACCTAACGAAACGACGCCAT GATACTTGAGATACAGCTGGAATTAGTGACTGCGCTTAACATCCGTAGAG AAGAGTTGTTCCAATGTAGGCATAAACCAGCAGCAAGCGTTTGTGATGGA TTTTTTTAAACTATGATACACAAAGAGAAATCAATAATCACACAAAATGT AAGGCATGTGTTATCCACAATTAGCTTAACAATATGTGTTGACATAGTAA GTGAATTTGTTCAGTGGAGTGCTATAAACCAAAACGTACAAGAAATGTCT GGTATGGGCAAGTGACAAAGAGCTTTTGATAATGTTTG

Coding sequence (CDS) from alignment at Sc0000311:14607..19144+

>transcript:BL97461_cuf1 ID=transcript:BL97461_cuf1|Name=transcript:BL97461_cuf1|organism=Branchiostoma lanceolatum|type=CDS|length=13056bp|location=Sequence derived from alignment at Sc0000311:14607..19144+ (Branchiostoma lanceolatum)
NNGTGTTCACATTATGTTTCTGGTTGTTCCACAGGGCAGAAGTATGAATA
CGAGTACATGAAACCTCTGAGGACTCACCCCGATGTTCCTCTGGAGGAGT
ATCCCGCCGCCTGTGTTCCCATGCCGACAGGGGAGATGTTCACTCCGCAG
AAAGCTGGACGGCTCATGGAACGTCTCATGCAGTTCATCGCATCCCAGGG
CCAGATCATGGTGCGCCGGGCCCAGGCAAAGGGTATCTGGGATCCGTGGA
AGGCCAACTTCAGCGGCTACCTTCCTGCTAACGAGAGGCTCATTGAAGAA
TGGCAGAAAGACGAGGAGTTTTGCCGCCAGTACCTCCAGGGCATCAACCC
CATGCTGGTGACCGTGTGTAAGGACCAGAGCCGGATCCCAGCAGAGATGC
TTGGCCTGAAAGGACAAGGCAAGACTACACTGCAGCTCATGGAGGAGAAC
AGGCTCTTCATCGTGGACTACGCACCCATGCTCGGTGTTCCTCCTACTCC
GGGCAAATTCTTCTACGCGCCGATCGTGCTGATGTACAAGGAACAGTTGG
CTGGAGGGAAGTCTCGTCTGAACATGCTCGGCATCCAGCTAACTAGAGAC
AAAGGTGAGAACGAAGTGTACTCCCCTGAGAGTGCTAAGACTCACCCCAA
CAAGTACATGTTCGCCAAGATGCACGTGGTGTCATCTGATAACAACGTGC
ACCAGTTCCTATACCATCTGGGCTACACTCATCTCGGCATGGAGCCGTTA
GTGGTCGCCATGCACACCCACCTGCCACCAGACCACCCCATTCACCGCCT
GCTGCTGCCGCATTTCAAGGACACCATCGGCATCAACTACCTGGCCCGCC
ACTCCCTCGTCTCCAGGATCTTCCCAATCACCGACCCGATGTTCGCTACT
TCCACCGTGGGAGGGCTCATCATGTTCCTCGAGGAGTGGCGCAAGTACAA
CTTCATGGACATGGCTTTCCCTGAAGAGCTGAAACGCCGTGGTTTCGATG
AGGCCGGGACGGATGGACTGGAAAACTATTTCTATCGCGATGACGGCTTC
AAACTGTGGAACGTCTACAAAACGTACGTGACGGGGATGGTCAACCATGC
GTACACTGGTGACAAAGCTGTGCAAGCTGACAAAGCCCTTCAGGAATTCT
GCAGGATGACTGAAGGTCCTGGACATCTTCACGGATTTCCACGTGAGATT
TCTACCAAGAAGCTGCTCATCGACTGCCTGACCAACATCATCTTCAACGT
GAGCGCGCAGCACTCCGCCGTCAACTTCCCGCAGTATGAGTACTACTCCT
TCATACCCAACAGGCCGGCCCAGCTGTCGATGCCGATGCCTGACGGACCG
AACGACATGTTGGAGTCCGCTGTACTCGAGGCTCTGCCGCATGAAACGAA
CACGACTCTTCAGGTCCTCCTGTCGTACATGCTGTCCATGCCCTCCCAGA
CTGCTATCACTGGGGTGGAGGCTATGAAAGACGTGTACCCCGATGTCCAT
GAGAAATTCCACACACAGCTCCTGGACCTCTCCAAGGAGATCAAGGCTCG
TAACGAGGGTCTGAAGGGGGAGGGGAAGGTCGCCTACACCTACCTGGACC
CCGAGAACGTCGCCATGAGCATCGACATCTAANNGTGTTCACATTATGTT
TCTGGTTGTTCCACAGGGCAGAAGTATGAATACGAGTACATGAAACCTCT
GAGGACTCACCCCGATGTTCCTCTGGAGGAGTATCCCGCCGCCTGTGTTC
CCATGCCGACAGGGGAGATGTTCACTCCGCAGAAAGCTGGACGGCTCATG
GAACGTCTCATGCAGTTCATCGCATCCCAGGGCCAGATCATGGTGCGCCG
GGCCCAGGCAAAGGGTATCTGGGATCCGTGGAAGGCCAACTTCAGCGGCT
ACCTTCCTGCTAACGAGAGGCTCATTGAAGAATGGCAGAAAGACGAGGAG
TTTTGCCGCCAGTACCTCCAGGGCATCAACCCCATGCTGGTGACCGTGTG
TAAGGACCAGAGCCGGATCCCAGCAGAGATGCTTGGCCTGAAAGGACAAG
GCAAGACTACACTGCAGCTCATGGAGGAGAACAGGCTCTTCATCGTGGAC
TACGCACCCATGCTCGGTGTTCCTCCTACTCCGGGCAAATTCTTCTACGC
GCCGATCGTGCTGATGTACAAGGAACAGTTGGCTGGAGGGAAGTCTCGTC
TGAACATGCTCGGCATCCAGCTAACTAGAGACAAAGGTGAGAACGAAGTG
TACTCCCCTGAGAGTGCTAAGACTCACCCCAACAAGTACATGTTCGCCAA
GATGCACGTGGTGTCATCTGATAACAACGTGCACCAGTTCCTATACCATC
TGGGCTACACTCATCTCGGCATGGAGCCGTTAGTGGTCGCCATGCACACC
CACCTGCCACCAGACCACCCCATTCACCGCCTGCTGCTGCCGCATTTCAA
GGACACCATCGGCATCAACTACCTGGCCCGCCACTCCCTCGTCTCCAGGA
TCTTCCCAATCACCGACCCGATGTTCGCTACTTCCACCGTGGGAGGGCTC
ATCATGTTCCTCGAGGAGTGGCGCAAGTACAACTTCATGGACATGGCTTT
CCCTGAAGAGCTGAAACGCCGTGGTTTCGATGAGGCCGGGACGGATGGAC
TGGAAAACTATTTCTATCGCGATGACGGCTTCAAACTGTGGAACGTCTAC
AAAACGTACGTGACGGGGATGGTCAACCATGCGTACACTGGTGACAAAGC
TGTGCAAGCTGACAAAGCCCTTCAGGAATTCTGCAGGATGACTGAAGGTC
CTGGACATCTTCACGGATTTCCACGTGAGATTTCTACCAAGAAGCTGCTC
ATCGACTGCCTGACCAACATCATCTTCAACGTGAGCGCGCAGCACTCCGC
CGTCAACTTCCCGCAGTATGAGTACTACTCCTTCATACCCAACAGGCCGG
CCCAGCTGTCGATGCCGATGCCTGACGGACCGAACGACATGTTGGAGTCC
GCTGTACTCGAGGCTCTGCCGCATGAAACGAACACGACTCTTCAGGTCCT
CCTGTCGTACATGCTGTCCATGCCCTCCCAGACTGCTATCACTGGGGTGG
AGGCTATGAAAGACGTGTACCCCGATGTCCATGAGAAATTCCACACACAG
CTCCTGGACCTCTCCAAGGAGATCAAGGCTCGTAACGAGGGTCTGAAGGG
GGAGGGGAAGGTCGCCTACACCTACCTGGACCCCGAGAACGTCGCCATGA
GCATCGACATCTAANNGTGTTCACATTATGTTTCTGGTTGTTCCACAGGG
CAGAAGTATGAATACGAGTACATGAAACCTCTGAGGACTCACCCCGATGT
TCCTCTGGAGGAGTATCCCGCCGCCTGTGTTCCCATGCCGACAGGGGAGA
TGTTCACTCCGCAGAAAGCTGGACGGCTCATGGAACGTCTCATGCAGTTC
ATCGCATCCCAGGGCCAGATCATGGTGCGCCGGGCCCAGGCAAAGGGTAT
CTGGGATCCGTGGAAGGCCAACTTCAGCGGCTACCTTCCTGCTAACGAGA
GGCTCATTGAAGAATGGCAGAAAGACGAGGAGTTTTGCCGCCAGTACCTC
CAGGGCATCAACCCCATGCTGGTGACCGTGTGTAAGGACCAGAGCCGGAT
CCCAGCAGAGATGCTTGGCCTGAAAGGACAAGGCAAGACTACACTGCAGC
TCATGGAGGAGAACAGGCTCTTCATCGTGGACTACGCACCCATGCTCGGT
GTTCCTCCTACTCCGGGCAAATTCTTCTACGCGCCGATCGTGCTGATGTA
CAAGGAACAGTTGGCTGGAGGGAAGTCTCGTCTGAACATGCTCGGCATCC
AGCTAACTAGAGACAAAGGTGAGAACGAAGTGTACTCCCCTGAGAGTGCT
AAGACTCACCCCAACAAGTACATGTTCGCCAAGATGCACGTGGTGTCATC
TGATAACAACGTGCACCAGTTCCTATACCATCTGGGCTACACTCATCTCG
GCATGGAGCCGTTAGTGGTCGCCATGCACACCCACCTGCCACCAGACCAC
CCCATTCACCGCCTGCTGCTGCCGCATTTCAAGGACACCATCGGCATCAA
CTACCTGGCCCGCCACTCCCTCGTCTCCAGGATCTTCCCAATCACCGACC
CGATGTTCGCTACTTCCACCGTGGGAGGGCTCATCATGTTCCTCGAGGAG
TGGCGCAAGTACAACTTCATGGACATGGCTTTCCCTGAAGAGCTGAAACG
CCGTGGTTTCGATGAGGCCGGGACGGATGGACTGGAAAACTATTTCTATC
GCGATGACGGCTTCAAACTGTGGAACGTCTACAAAACGTACGTGACGGGG
ATGGTCAACCATGCGTACACTGGTGACAAAGCTGTGCAAGCTGACAAAGC
CCTTCAGGAATTCTGCAGGATGACTGAAGGTCCTGGACATCTTCACGGAT
TTCCACGTGAGATTTCTACCAAGAAGCTGCTCATCGACTGCCTGACCAAC
ATCATCTTCAACGTGAGCGCGCAGCACTCCGCCGTCAACTTCCCGCAGTA
TGAGTACTACTCCTTCATACCCAACAGGCCGGCCCAGCTGTCGATGCCGA
TGCCTGACGGACCGAACGACATGTTGGAGTCCGCTGTACTCGAGGCTCTG
CCGCATGAAACGAACACGACTCTTCAGGTCCTCCTGTCGTACATGCTGTC
CATGCCCTCCCAGACTGCTATCACTGGGGTGGAGGCTATGAAAGACGTGT
ACCCCGATGTCCATGAGAAATTCCACACACAGCTCCTGGACCTCTCCAAG
GAGATCAAGGCTCGTAACGAGGGTCTGAAGGGGGAGGGGAAGGTCGCCTA
CACCTACCTGGACCCCGAGAACGTCGCCATGAGCATCGACATCTAANNGT
GTTCACATTATGTTTCTGGTTGTTCCACAGGGCAGAAGTATGAATACGAG
TACATGAAACCTCTGAGGACTCACCCCGATGTTCCTCTGGAGGAGTATCC
CGCCGCCTGTGTTCCCATGCCGACAGGGGAGATGTTCACTCCGCAGAAAG
CTGGACGGCTCATGGAACGTCTCATGCAGTTCATCGCATCCCAGGGCCAG
ATCATGGTGCGCCGGGCCCAGGCAAAGGGTATCTGGGATCCGTGGAAGGC
CAACTTCAGCGGCTACCTTCCTGCTAACGAGAGGCTCATTGAAGAATGGC
AGAAAGACGAGGAGTTTTGCCGCCAGTACCTCCAGGGCATCAACCCCATG
CTGGTGACCGTGTGTAAGGACCAGAGCCGGATCCCAGCAGAGATGCTTGG
CCTGAAAGGACAAGGCAAGACTACACTGCAGCTCATGGAGGAGAACAGGC
TCTTCATCGTGGACTACGCACCCATGCTCGGTGTTCCTCCTACTCCGGGC
AAATTCTTCTACGCGCCGATCGTGCTGATGTACAAGGAACAGTTGGCTGG
AGGGAAGTCTCGTCTGAACATGCTCGGCATCCAGCTAACTAGAGACAAAG
GTGAGAACGAAGTGTACTCCCCTGAGAGTGCTAAGACTCACCCCAACAAG
TACATGTTCGCCAAGATGCACGTGGTGTCATCTGATAACAACGTGCACCA
GTTCCTATACCATCTGGGCTACACTCATCTCGGCATGGAGCCGTTAGTGG
TCGCCATGCACACCCACCTGCCACCAGACCACCCCATTCACCGCCTGCTG
CTGCCGCATTTCAAGGACACCATCGGCATCAACTACCTGGCCCGCCACTC
CCTCGTCTCCAGGATCTTCCCAATCACCGACCCGATGTTCGCTACTTCCA
CCGTGGGAGGGCTCATCATGTTCCTCGAGGAGTGGCGCAAGTACAACTTC
ATGGACATGGCTTTCCCTGAAGAGCTGAAACGCCGTGGTTTCGATGAGGC
CGGGACGGATGGACTGGAAAACTATTTCTATCGCGATGACGGCTTCAAAC
TGTGGAACGTCTACAAAACGTACGTGACGGGGATGGTCAACCATGCGTAC
ACTGGTGACAAAGCTGTGCAAGCTGACAAAGCCCTTCAGGAATTCTGCAG
GATGACTGAAGGTCCTGGACATCTTCACGGATTTCCACGTGAGATTTCTA
CCAAGAAGCTGCTCATCGACTGCCTGACCAACATCATCTTCAACGTGAGC
GCGCAGCACTCCGCCGTCAACTTCCCGCAGTATGAGTACTACTCCTTCAT
ACCCAACAGGCCGGCCCAGCTGTCGATGCCGATGCCTGACGGACCGAACG
ACATGTTGGAGTCCGCTGTACTCGAGGCTCTGCCGCATGAAACGAACACG
ACTCTTCAGGTCCTCCTGTCGTACATGCTGTCCATGCCCTCCCAGACTGC
TATCACTGGGGTGGAGGCTATGAAAGACGTGTACCCCGATGTCCATGAGA
AATTCCACACACAGCTCCTGGACCTCTCCAAGGAGATCAAGGCTCGTAAC
GAGGGTCTGAAGGGGGAGGGGAAGGTCGCCTACACCTACCTGGACCCCGA
GAACGTCGCCATGAGCATCGACATCTAANNGTGTTCACATTATGTTTCTG
GTTGTTCCACAGGGCAGAAGTATGAATACGAGTACATGAAACCTCTGAGG
ACTCACCCCGATGTTCCTCTGGAGGAGTATCCCGCCGCCTGTGTTCCCAT
GCCGACAGGGGAGATGTTCACTCCGCAGAAAGCTGGACGGCTCATGGAAC
GTCTCATGCAGTTCATCGCATCCCAGGGCCAGATCATGGTGCGCCGGGCC
CAGGCAAAGGGTATCTGGGATCCGTGGAAGGCCAACTTCAGCGGCTACCT
TCCTGCTAACGAGAGGCTCATTGAAGAATGGCAGAAAGACGAGGAGTTTT
GCCGCCAGTACCTCCAGGGCATCAACCCCATGCTGGTGACCGTGTGTAAG
GACCAGAGCCGGATCCCAGCAGAGATGCTTGGCCTGAAAGGACAAGGCAA
GACTACACTGCAGCTCATGGAGGAGAACAGGCTCTTCATCGTGGACTACG
CACCCATGCTCGGTGTTCCTCCTACTCCGGGCAAATTCTTCTACGCGCCG
ATCGTGCTGATGTACAAGGAACAGTTGGCTGGAGGGAAGTCTCGTCTGAA
CATGCTCGGCATCCAGCTAACTAGAGACAAAGGTGAGAACGAAGTGTACT
CCCCTGAGAGTGCTAAGACTCACCCCAACAAGTACATGTTCGCCAAGATG
CACGTGGTGTCATCTGATAACAACGTGCACCAGTTCCTATACCATCTGGG
CTACACTCATCTCGGCATGGAGCCGTTAGTGGTCGCCATGCACACCCACC
TGCCACCAGACCACCCCATTCACCGCCTGCTGCTGCCGCATTTCAAGGAC
ACCATCGGCATCAACTACCTGGCCCGCCACTCCCTCGTCTCCAGGATCTT
CCCAATCACCGACCCGATGTTCGCTACTTCCACCGTGGGAGGGCTCATCA
TGTTCCTCGAGGAGTGGCGCAAGTACAACTTCATGGACATGGCTTTCCCT
GAAGAGCTGAAACGCCGTGGTTTCGATGAGGCCGGGACGGATGGACTGGA
AAACTATTTCTATCGCGATGACGGCTTCAAACTGTGGAACGTCTACAAAA
CGTACGTGACGGGGATGGTCAACCATGCGTACACTGGTGACAAAGCTGTG
CAAGCTGACAAAGCCCTTCAGGAATTCTGCAGGATGACTGAAGGTCCTGG
ACATCTTCACGGATTTCCACGTGAGATTTCTACCAAGAAGCTGCTCATCG
ACTGCCTGACCAACATCATCTTCAACGTGAGCGCGCAGCACTCCGCCGTC
AACTTCCCGCAGTATGAGTACTACTCCTTCATACCCAACAGGCCGGCCCA
GCTGTCGATGCCGATGCCTGACGGACCGAACGACATGTTGGAGTCCGCTG
TACTCGAGGCTCTGCCGCATGAAACGAACACGACTCTTCAGGTCCTCCTG
TCGTACATGCTGTCCATGCCCTCCCAGACTGCTATCACTGGGGTGGAGGC
TATGAAAGACGTGTACCCCGATGTCCATGAGAAATTCCACACACAGCTCC
TGGACCTCTCCAAGGAGATCAAGGCTCGTAACGAGGGTCTGAAGGGGGAG
GGGAAGGTCGCCTACACCTACCTGGACCCCGAGAACGTCGCCATGAGCAT
CGACATCTAANNGTGTTCACATTATGTTTCTGGTTGTTCCACAGGGCAGA
AGTATGAATACGAGTACATGAAACCTCTGAGGACTCACCCCGATGTTCCT
CTGGAGGAGTATCCCGCCGCCTGTGTTCCCATGCCGACAGGGGAGATGTT
CACTCCGCAGAAAGCTGGACGGCTCATGGAACGTCTCATGCAGTTCATCG
CATCCCAGGGCCAGATCATGGTGCGCCGGGCCCAGGCAAAGGGTATCTGG
GATCCGTGGAAGGCCAACTTCAGCGGCTACCTTCCTGCTAACGAGAGGCT
CATTGAAGAATGGCAGAAAGACGAGGAGTTTTGCCGCCAGTACCTCCAGG
GCATCAACCCCATGCTGGTGACCGTGTGTAAGGACCAGAGCCGGATCCCA
GCAGAGATGCTTGGCCTGAAAGGACAAGGCAAGACTACACTGCAGCTCAT
GGAGGAGAACAGGCTCTTCATCGTGGACTACGCACCCATGCTCGGTGTTC
CTCCTACTCCGGGCAAATTCTTCTACGCGCCGATCGTGCTGATGTACAAG
GAACAGTTGGCTGGAGGGAAGTCTCGTCTGAACATGCTCGGCATCCAGCT
AACTAGAGACAAAGGTGAGAACGAAGTGTACTCCCCTGAGAGTGCTAAGA
CTCACCCCAACAAGTACATGTTCGCCAAGATGCACGTGGTGTCATCTGAT
AACAACGTGCACCAGTTCCTATACCATCTGGGCTACACTCATCTCGGCAT
GGAGCCGTTAGTGGTCGCCATGCACACCCACCTGCCACCAGACCACCCCA
TTCACCGCCTGCTGCTGCCGCATTTCAAGGACACCATCGGCATCAACTAC
CTGGCCCGCCACTCCCTCGTCTCCAGGATCTTCCCAATCACCGACCCGAT
GTTCGCTACTTCCACCGTGGGAGGGCTCATCATGTTCCTCGAGGAGTGGC
GCAAGTACAACTTCATGGACATGGCTTTCCCTGAAGAGCTGAAACGCCGT
GGTTTCGATGAGGCCGGGACGGATGGACTGGAAAACTATTTCTATCGCGA
TGACGGCTTCAAACTGTGGAACGTCTACAAAACGTACGTGACGGGGATGG
TCAACCATGCGTACACTGGTGACAAAGCTGTGCAAGCTGACAAAGCCCTT
CAGGAATTCTGCAGGATGACTGAAGGTCCTGGACATCTTCACGGATTTCC
ACGTGAGATTTCTACCAAGAAGCTGCTCATCGACTGCCTGACCAACATCA
TCTTCAACGTGAGCGCGCAGCACTCCGCCGTCAACTTCCCGCAGTATGAG
TACTACTCCTTCATACCCAACAGGCCGGCCCAGCTGTCGATGCCGATGCC
TGACGGACCGAACGACATGTTGGAGTCCGCTGTACTCGAGGCTCTGCCGC
ATGAAACGAACACGACTCTTCAGGTCCTCCTGTCGTACATGCTGTCCATG
CCCTCCCAGACTGCTATCACTGGGGTGGAGGCTATGAAAGACGTGTACCC
CGATGTCCATGAGAAATTCCACACACAGCTCCTGGACCTCTCCAAGGAGA
TCAAGGCTCGTAACGAGGGTCTGAAGGGGGAGGGGAAGGTCGCCTACACC
TACCTGGACCCCGAGAACGTCGCCATGAGCATCGACATCTAANNGTGTTC
ACATTATGTTTCTGGTTGTTCCACAGGGCAGAAGTATGAATACGAGTACA
TGAAACCTCTGAGGACTCACCCCGATGTTCCTCTGGAGGAGTATCCCGCC
GCCTGTGTTCCCATGCCGACAGGGGAGATGTTCACTCCGCAGAAAGCTGG
ACGGCTCATGGAACGTCTCATGCAGTTCATCGCATCCCAGGGCCAGATCA
TGGTGCGCCGGGCCCAGGCAAAGGGTATCTGGGATCCGTGGAAGGCCAAC
TTCAGCGGCTACCTTCCTGCTAACGAGAGGCTCATTGAAGAATGGCAGAA
AGACGAGGAGTTTTGCCGCCAGTACCTCCAGGGCATCAACCCCATGCTGG
TGACCGTGTGTAAGGACCAGAGCCGGATCCCAGCAGAGATGCTTGGCCTG
AAAGGACAAGGCAAGACTACACTGCAGCTCATGGAGGAGAACAGGCTCTT
CATCGTGGACTACGCACCCATGCTCGGTGTTCCTCCTACTCCGGGCAAAT
TCTTCTACGCGCCGATCGTGCTGATGTACAAGGAACAGTTGGCTGGAGGG
AAGTCTCGTCTGAACATGCTCGGCATCCAGCTAACTAGAGACAAAGGTGA
GAACGAAGTGTACTCCCCTGAGAGTGCTAAGACTCACCCCAACAAGTACA
TGTTCGCCAAGATGCACGTGGTGTCATCTGATAACAACGTGCACCAGTTC
CTATACCATCTGGGCTACACTCATCTCGGCATGGAGCCGTTAGTGGTCGC
CATGCACACCCACCTGCCACCAGACCACCCCATTCACCGCCTGCTGCTGC
CGCATTTCAAGGACACCATCGGCATCAACTACCTGGCCCGCCACTCCCTC
GTCTCCAGGATCTTCCCAATCACCGACCCGATGTTCGCTACTTCCACCGT
GGGAGGGCTCATCATGTTCCTCGAGGAGTGGCGCAAGTACAACTTCATGG
ACATGGCTTTCCCTGAAGAGCTGAAACGCCGTGGTTTCGATGAGGCCGGG
ACGGATGGACTGGAAAACTATTTCTATCGCGATGACGGCTTCAAACTGTG
GAACGTCTACAAAACGTACGTGACGGGGATGGTCAACCATGCGTACACTG
GTGACAAAGCTGTGCAAGCTGACAAAGCCCTTCAGGAATTCTGCAGGATG
ACTGAAGGTCCTGGACATCTTCACGGATTTCCACGTGAGATTTCTACCAA
GAAGCTGCTCATCGACTGCCTGACCAACATCATCTTCAACGTGAGCGCGC
AGCACTCCGCCGTCAACTTCCCGCAGTATGAGTACTACTCCTTCATACCC
AACAGGCCGGCCCAGCTGTCGATGCCGATGCCTGACGGACCGAACGACAT
GTTGGAGTCCGCTGTACTCGAGGCTCTGCCGCATGAAACGAACACGACTC
TTCAGGTCCTCCTGTCGTACATGCTGTCCATGCCCTCCCAGACTGCTATC
ACTGGGGTGGAGGCTATGAAAGACGTGTACCCCGATGTCCATGAGAAATT
CCACACACAGCTCCTGGACCTCTCCAAGGAGATCAAGGCTCGTAACGAGG
GTCTGAAGGGGGAGGGGAAGGTCGCCTACACCTACCTGGACCCCGAGAAC
GTCGCCATGAGCATCGACATCTAANNGTGTTCACATTATGTTTCTGGTTG
TTCCACAGGGCAGAAGTATGAATACGAGTACATGAAACCTCTGAGGACTC
ACCCCGATGTTCCTCTGGAGGAGTATCCCGCCGCCTGTGTTCCCATGCCG
ACAGGGGAGATGTTCACTCCGCAGAAAGCTGGACGGCTCATGGAACGTCT
CATGCAGTTCATCGCATCCCAGGGCCAGATCATGGTGCGCCGGGCCCAGG
CAAAGGGTATCTGGGATCCGTGGAAGGCCAACTTCAGCGGCTACCTTCCT
GCTAACGAGAGGCTCATTGAAGAATGGCAGAAAGACGAGGAGTTTTGCCG
CCAGTACCTCCAGGGCATCAACCCCATGCTGGTGACCGTGTGTAAGGACC
AGAGCCGGATCCCAGCAGAGATGCTTGGCCTGAAAGGACAAGGCAAGACT
ACACTGCAGCTCATGGAGGAGAACAGGCTCTTCATCGTGGACTACGCACC
CATGCTCGGTGTTCCTCCTACTCCGGGCAAATTCTTCTACGCGCCGATCG
TGCTGATGTACAAGGAACAGTTGGCTGGAGGGAAGTCTCGTCTGAACATG
CTCGGCATCCAGCTAACTAGAGACAAAGGTGAGAACGAAGTGTACTCCCC
TGAGAGTGCTAAGACTCACCCCAACAAGTACATGTTCGCCAAGATGCACG
TGGTGTCATCTGATAACAACGTGCACCAGTTCCTATACCATCTGGGCTAC
ACTCATCTCGGCATGGAGCCGTTAGTGGTCGCCATGCACACCCACCTGCC
ACCAGACCACCCCATTCACCGCCTGCTGCTGCCGCATTTCAAGGACACCA
TCGGCATCAACTACCTGGCCCGCCACTCCCTCGTCTCCAGGATCTTCCCA
ATCACCGACCCGATGTTCGCTACTTCCACCGTGGGAGGGCTCATCATGTT
CCTCGAGGAGTGGCGCAAGTACAACTTCATGGACATGGCTTTCCCTGAAG
AGCTGAAACGCCGTGGTTTCGATGAGGCCGGGACGGATGGACTGGAAAAC
TATTTCTATCGCGATGACGGCTTCAAACTGTGGAACGTCTACAAAACGTA
CGTGACGGGGATGGTCAACCATGCGTACACTGGTGACAAAGCTGTGCAAG
CTGACAAAGCCCTTCAGGAATTCTGCAGGATGACTGAAGGTCCTGGACAT
CTTCACGGATTTCCACGTGAGATTTCTACCAAGAAGCTGCTCATCGACTG
CCTGACCAACATCATCTTCAACGTGAGCGCGCAGCACTCCGCCGTCAACT
TCCCGCAGTATGAGTACTACTCCTTCATACCCAACAGGCCGGCCCAGCTG
TCGATGCCGATGCCTGACGGACCGAACGACATGTTGGAGTCCGCTGTACT
CGAGGCTCTGCCGCATGAAACGAACACGACTCTTCAGGTCCTCCTGTCGT
ACATGCTGTCCATGCCCTCCCAGACTGCTATCACTGGGGTGGAGGCTATG
AAAGACGTGTACCCCGATGTCCATGAGAAATTCCACACACAGCTCCTGGA
CCTCTCCAAGGAGATCAAGGCTCGTAACGAGGGTCTGAAGGGGGAGGGGA
AGGTCGCCTACACCTACCTGGACCCCGAGAACGTCGCCATGAGCATCGAC
ATCTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
gene:BL97461gene:BL97461Branchiostoma lanceolatumgene
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
transcript:BL97461_cuf1transcript:BL97461_cuf1-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
BL97461_cuf1-E1BL97461_cuf1-E1-1564476830-432653Branchiostoma lanceolatumexon
BL97461_cuf1-E2BL97461_cuf1-E2-1564476830-432655Branchiostoma lanceolatumexon
BL97461_cuf1-E3BL97461_cuf1-E3-1564476830-432657Branchiostoma lanceolatumexon
BL97461_cuf1-E4BL97461_cuf1-E4-1564476830-432659Branchiostoma lanceolatumexon
BL97461_cuf1-E5BL97461_cuf1-E5-1564476830-432661Branchiostoma lanceolatumexon
BL97461_cuf1-E6BL97461_cuf1-E6-1564476830-432663Branchiostoma lanceolatumexon
BL97461_cuf1-E7BL97461_cuf1-E7-1564476830-432665Branchiostoma lanceolatumexon
BL97461_cuf1-E8BL97461_cuf1-E8-1564476830-432668Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000311genomeSc0000311:14607..19144 +
Properties
Property NameValue
Transcript idBL97461_cuf1
Biotypeprotein_coding