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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL97449_cuf0 >transcript:BL97449_cuf0-protein ID=transcript:BL97449_cuf0-protein|Name=transcript:BL97449_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=193bp
VAENEPFVGTPVTPRCAPRVREASKVIYPSLDEMLAEAQEETPVKALLTS
PGRRPRTSPVGLLERLRRHTVNLGGDALSLLSTPPVKRRRASYAQHLPEA
PPQQTPPSILKVRRAVRKSVSPQASEARTRQATGSISDFAMPTPPRYQRR
TISIAEPPKEQKETPRKIRFAAETPGLPPSPDVFDPPSFPEER Run BLAST on NCBI mRNA from alignment at Sc0000010:5417162..5420229- Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL97449_cuf0 ID=transcript:BL97449_cuf0|Name=transcript:BL97449_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=3068bp|location=Sequence derived from alignment at Sc0000010:5417162..5420229- (Branchiostoma lanceolatum)
GTGGCAGAGAACGAACCATTTGTAGGAACTCCTGTCACACCTCGGTGTGC
GCCAAGAGTCAGGTAATATCTCCATCATCATTCGTTATACAACTTACATC
TTACCTAGTGCAGCTATGCAGGATCATCCTTTATCATAAAGCTTTTCAAG
CCATAGCAAGTCATACCATAACGTGTGGCTTCTCCCCCCACCAGGGAGGC
CAGTAAGGTGATCTACCCCAGTCTGGATGAGATGCTGGCGGAAGCTCAGG
AGGAGACACCTGTGAAAGCCCTCCTCACCTCACCTGGGCGACGCCCTCGC
ACCTCACCTGTGGGACTGCTGGAGAGACTCAGAAGGTGAGGAAATAGATA
AGTAGCACTCCTGACTTTTGTATAGCACAATATTCGTCTCCCTCAGTGTG
TGAGTGTGTGTTTGTGTGAGAGTGAGTGAGTGAGTGAGTGAGCGTGTAAG
TGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTGAGTG
AGTGAGTGAGTGAGTGAGTGAGTGTGCATTTAGACCGAAACATGATTTAC
ACTGAAACCACCACACACCAACTTATTCCACTGTACATACATGTATACTA
AGCAAGCATAACATACATGTACATACATGTATAGAGCACCCAGGTCTACA
AAGTCTTTTATTCTGCTGTCTAAGAAAAAAAAGTCAAACCTAATAAGTAA
GAATTTAGAGTCAGCATTTAGACTAGTGAGAGTAGACACATGCTATACTG
TTCTACAATACATGTATGTGTCTGTCCTTTTCTTGCTACTTGCAATTAGC
CCACGGGCACGAATTTGCAGTAAATGTACTTTACATTTATTTAATTTTTT
TCCCCCAGGCACACAGTAAACCTGGGCGGAGACGCCCTGTCCCTGCTGTC
CACCCCCCCAGTGAAGCGTCGCCGCGCCTCCTACGCCCAGCACCTGCCCG
AGGCACCCCCCCAGCAGACACCCCCCTCCATCCTCAAGGTGCGGAGGGCT
GTCAGGAAGTCTGTCAGTCCTCAGGCATCGGAGGCAAGGACCAGGCAGGC
TACAGGTGAGGGTGACTTTCTTGTATACGTCAGGGTAAAGACTACGGTCT
GGTAGAATCACCGATTCTGCCGGTAGAGATCCTGATCGGGGTCTCTGTCG
ACATGGACTCCGATCAGGATCTTCACACTATAACAGCAACACCTAGCTGC
AGTGCAAAGTAGAACCTGTGACCTGAGGAAGGTCAGGCCTCGAAATTAAC
TTTTTCCCCTACTGTCCCAACATTGTCCCAAAAATGGATTTCAACTGTCC
CGAAAGTGTCCCGAAGTGTCCCAACCAGGGCCAAAGATCTGAACTAAGTG
GGGAGTCCGGTTTCGGTTCCAGAGGTTCATGTTCAGGTTCGGACCTATAC
TCAAGTCTGAACCTGAACCCAAGCCATGGCATATGTGTGTTAGAATATTT
TTTCTGTAATATAAAAAATTGCATATTGGCAAACAAATTGCATGAAATTT
GAAAAGTATAATACCTGCAAAATTATATTCAGTTAAGTTCTAACAAAGTT
AACAACCTGAAATAATGTATTTTAATAGGTTATAAAAGAAAAGGCATAAT
TCTGAGTTTAAGGACTTCATTGATGTGGTGGTTCTTGGGGAGGTAGAATA
AATCCTAAAAAATGTTTGATTTCCATTCTGCCATTTTCTTCATAAAAGCC
TCCTTGTTCACTGTCACATTGCTGTAAGCCTCCAATCTGATCGATCTGGC
ACCAATTATAATGTGCATCAATACCAAGGAGGTTAAAATCCTATTCTAAC
CTCCTTGATCAACACCATCAAAATCAATATAAATTTCCCATTTTTTTCCA
TCTTTGAAAACTGTTATCTTTACCTGAACAACTTTCTGACACAATGAGAG
ATTTTCGATAAATTTGCAGACAGGGATTTAGGATTCTTTGATGGTTTAGG
AATATTGTCAGACTACAGAACTGTACTAGTAGGTCTTGCAGGGCAAACCT
TAAATCAAGTTAATGAGGTGTGACCATCCCTCTGCTGACCCCCTGTCAGG
GGTGTGTCACCGGACCAGTCTACAGTTTCACAAGGGAGGTATCAAGGGAG
GAGCACGATGCAACCGGAAAATCAAATCCAGTCGCACAGCAGCCTGATTT
CCAGGCGTCAACCAAAGTCGCACTCAGGAGCCCTGGTTGTCCCAAAGATG
TCCCAAATTGATTTTTCAGTTGTCCCGGGTCAAATTTTGGTGGCCCCGGG
ACATCGGGACATGGTTAACTTCGAGCCCTGAAGGTGACAGACGGTCACCG
AAACGTCGGAAGTTGATTAGTATATGTACTGGTGTGTGCACAGAACTTTC
TTATCCAGTCCTGTTGATTGCTGTAATTCACTTTATCTTCATGATAGCAA
AATTTCATGATGTAACGAAAATGGACACGGTGGCGGCAAGTGTTTTACAC
AACAAATGTNCACAACGAATGTGTGAAGAAATCGTGAATAATAACAACAG
GTTTTTTCACATTCACGGTACAGAGGTGACCGTGAAAAAAGTTACAGTGA
AAGAAACAAGAATTACAGTATATATAAAAATCCCATCCCCGCACAGGTTC
CATCTCCGACTTCGCCATGCCCACCCCTCCGCGGTACCAGAGGAGGACCA
TCTCGATCGCTGAGCCGCCCAAAGAGCAGAAGGAAACCCCGAGGAAGATC
CGCTTCGCCGCAGAAACTCCCGGCCTGCCGCCCTCTCCTGATGTGTACGT
CTGAACTCTTACTTATCATCTTAACAACCACCCTGTAAGGCCATCTTGTT
TTTATTATACGGATGAAATCTGCACAAGCTTCAAGTTCCGTCCATACAGT
AAATCATACAAAGCAGCCGGAAAATGAAAAAATATATCCTGTACATTGTG
AAACAAATATTTCAAAAAACAAATACTAATATCATAGAATGCCAAAGTCA
GTTCCACTTCAAAGAAGATGTGAAAGAACAAAAGTGAAGAATCTATTTTT
CGGTATACCATACTCTGTGTGTTCATCTCCCATCAGGTTTGACCCCCCGA
GTTTCCCGGAGGAGAGAG Coding sequence (CDS) from alignment at Sc0000010:5417162..5420229- >transcript:BL97449_cuf0 ID=transcript:BL97449_cuf0|Name=transcript:BL97449_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=2895bp|location=Sequence derived from alignment at Sc0000010:5417162..5420229- (Branchiostoma lanceolatum)
GTGGCAGAGAACGAACCATTTGTAGGAACTCCTGTCACACCTCGGTGTGC
GCCAAGAGTCAGGGAGGCCAGTAAGGTGATCTACCCCAGTCTGGATGAGA
TGCTGGCGGAAGCTCAGGAGGAGACACCTGTGAAAGCCCTCCTCACCTCA
CCTGGGCGACGCCCTCGCACCTCACCTGTGGGACTGCTGGAGAGACTCAG
AAGGCACACAGTAAACCTGGGCGGAGACGCCCTGTCCCTGCTGTCCACCC
CCCCAGTGAAGCGTCGCCGCGCCTCCTACGCCCAGCACCTGCCCGAGGCA
CCCCCCCAGCAGACACCCCCCTCCATCCTCAAGGTGCGGAGGGCTGTCAG
GAAGTCTGTCAGTCCTCAGGCATCGGAGGCAAGGACCAGGCAGGCTACAG
GTTCCATCTCCGACTTCGCCATGCCCACCCCTCCGCGGTACCAGAGGAGG
ACCATCTCGATCGCTGAGCCGCCCAAAGAGCAGAAGGAAACCCCGAGGAA
GATCCGCTTCGCCGCAGAAACTCCCGGCCTGCCGCCCTCTCCTGATGTGT
TTGACCCCCCGAGTTTCCCGGAGGAGAGAGTGGCAGAGAACGAACCATTT
GTAGGAACTCCTGTCACACCTCGGTGTGCGCCAAGAGTCAGGGAGGCCAG
TAAGGTGATCTACCCCAGTCTGGATGAGATGCTGGCGGAAGCTCAGGAGG
AGACACCTGTGAAAGCCCTCCTCACCTCACCTGGGCGACGCCCTCGCACC
TCACCTGTGGGACTGCTGGAGAGACTCAGAAGGCACACAGTAAACCTGGG
CGGAGACGCCCTGTCCCTGCTGTCCACCCCCCCAGTGAAGCGTCGCCGCG
CCTCCTACGCCCAGCACCTGCCCGAGGCACCCCCCCAGCAGACACCCCCC
TCCATCCTCAAGGTGCGGAGGGCTGTCAGGAAGTCTGTCAGTCCTCAGGC
ATCGGAGGCAAGGACCAGGCAGGCTACAGGTTCCATCTCCGACTTCGCCA
TGCCCACCCCTCCGCGGTACCAGAGGAGGACCATCTCGATCGCTGAGCCG
CCCAAAGAGCAGAAGGAAACCCCGAGGAAGATCCGCTTCGCCGCAGAAAC
TCCCGGCCTGCCGCCCTCTCCTGATGTGTTTGACCCCCCGAGTTTCCCGG
AGGAGAGAGTGGCAGAGAACGAACCATTTGTAGGAACTCCTGTCACACCT
CGGTGTGCGCCAAGAGTCAGGGAGGCCAGTAAGGTGATCTACCCCAGTCT
GGATGAGATGCTGGCGGAAGCTCAGGAGGAGACACCTGTGAAAGCCCTCC
TCACCTCACCTGGGCGACGCCCTCGCACCTCACCTGTGGGACTGCTGGAG
AGACTCAGAAGGCACACAGTAAACCTGGGCGGAGACGCCCTGTCCCTGCT
GTCCACCCCCCCAGTGAAGCGTCGCCGCGCCTCCTACGCCCAGCACCTGC
CCGAGGCACCCCCCCAGCAGACACCCCCCTCCATCCTCAAGGTGCGGAGG
GCTGTCAGGAAGTCTGTCAGTCCTCAGGCATCGGAGGCAAGGACCAGGCA
GGCTACAGGTTCCATCTCCGACTTCGCCATGCCCACCCCTCCGCGGTACC
AGAGGAGGACCATCTCGATCGCTGAGCCGCCCAAAGAGCAGAAGGAAACC
CCGAGGAAGATCCGCTTCGCCGCAGAAACTCCCGGCCTGCCGCCCTCTCC
TGATGTGTTTGACCCCCCGAGTTTCCCGGAGGAGAGAGTGGCAGAGAACG
AACCATTTGTAGGAACTCCTGTCACACCTCGGTGTGCGCCAAGAGTCAGG
GAGGCCAGTAAGGTGATCTACCCCAGTCTGGATGAGATGCTGGCGGAAGC
TCAGGAGGAGACACCTGTGAAAGCCCTCCTCACCTCACCTGGGCGACGCC
CTCGCACCTCACCTGTGGGACTGCTGGAGAGACTCAGAAGGCACACAGTA
AACCTGGGCGGAGACGCCCTGTCCCTGCTGTCCACCCCCCCAGTGAAGCG
TCGCCGCGCCTCCTACGCCCAGCACCTGCCCGAGGCACCCCCCCAGCAGA
CACCCCCCTCCATCCTCAAGGTGCGGAGGGCTGTCAGGAAGTCTGTCAGT
CCTCAGGCATCGGAGGCAAGGACCAGGCAGGCTACAGGTTCCATCTCCGA
CTTCGCCATGCCCACCCCTCCGCGGTACCAGAGGAGGACCATCTCGATCG
CTGAGCCGCCCAAAGAGCAGAAGGAAACCCCGAGGAAGATCCGCTTCGCC
GCAGAAACTCCCGGCCTGCCGCCCTCTCCTGATGTGTTTGACCCCCCGAG
TTTCCCGGAGGAGAGAGTGGCAGAGAACGAACCATTTGTAGGAACTCCTG
TCACACCTCGGTGTGCGCCAAGAGTCAGGGAGGCCAGTAAGGTGATCTAC
CCCAGTCTGGATGAGATGCTGGCGGAAGCTCAGGAGGAGACACCTGTGAA
AGCCCTCCTCACCTCACCTGGGCGACGCCCTCGCACCTCACCTGTGGGAC
TGCTGGAGAGACTCAGAAGGCACACAGTAAACCTGGGCGGAGACGCCCTG
TCCCTGCTGTCCACCCCCCCAGTGAAGCGTCGCCGCGCCTCCTACGCCCA
GCACCTGCCCGAGGCACCCCCCCAGCAGACACCCCCCTCCATCCTCAAGG
TGCGGAGGGCTGTCAGGAAGTCTGTCAGTCCTCAGGCATCGGAGGCAAGG
ACCAGGCAGGCTACAGGTTCCATCTCCGACTTCGCCATGCCCACCCCTCC
GCGGTACCAGAGGAGGACCATCTCGATCGCTGAGCCGCCCAAAGAGCAGA
AGGAAACCCCGAGGAAGATCCGCTTCGCCGCAGAAACTCCCGGCCTGCCG
CCCTCTCCTGATGTGTTTGACCCCCCGAGTTTCCCGGAGGAGAGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000010 | genome | Sc0000010:5417162..5420229 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL97449_cuf0 |
| Biotype | protein_coding |
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