|
|
Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL97438_cuf3 >transcript:BL97438_cuf3-protein ID=transcript:BL97438_cuf3-protein|Name=transcript:BL97438_cuf3|organism=Branchiostoma lanceolatum|type=polypeptide|length=132bp
VECHPYLNQKQLLQLAKEKGLVFTAYSPLGSPDRPWAKPGDPSIMEDPKL
KPIADKYGKSVAQVLLRWGVQRDTIVIPKSVTPARIQQNIRVFDFALTSQ
EMETIDGFNVPYRACDVSWLDYMPDYPFHEPF Run BLAST on NCBI mRNA from alignment at Sc0000010:5208465..5209542- Legend: exonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL97438_cuf3 ID=transcript:BL97438_cuf3|Name=transcript:BL97438_cuf3|organism=Branchiostoma lanceolatum|type=mRNA|length=1078bp|location=Sequence derived from alignment at Sc0000010:5208465..5209542- (Branchiostoma lanceolatum)
GTGGAGTGCCACCCGTACCTGAACCAGAAGCAGCTGCTACAGTTGGCCAA
AGAGAAGGGTTTGGTGTTCACAGCCTACAGCCCGCTGGGCTCCCCTGACA
GGCCCTGGGCCAAGCCGGGAGACCCCTCCATCATGGAGGACCCCAAACTC
AAGCCGATTGCAGACAAATATGGCAAGTCTGTGGCTCAGGTAAGGAGGAC
TTCGTTTGTATACATAACGGTGAAAAGCATTACAGGGCCTGAAATATGAA
CCAAATGCATAGGTAGGTTAGCTAGGGTAAAATTGTAGCTGTCTCTGATG
TCTACCTGCACGTGTTTTGGGAAAAGCATTGGGTATGTAAGTTGATTTGA
ATTTGCTTTGTGGCGCTCTAACCATTATTCTATTCTGATCATTATCTATT
ACCGCCTGTGGAATGCCAAGTAAAGAATTGAAATGCTTTCTAAGGTTTCT
CAGTTTGATCCATACTTTCTCAAATCTCAAAAAAACAAATGTCTGGTACA
TGTAACACAGAAAAAAGTGCTCAGAGAAGCTAGGTACTTATCTTTACCTC
AAACTCAAGCCTATAACAGACAAATAAGGCAAGTATGTGGATCAGGTAAG
GAGGTCTTCTGTTACAAATTATTCCGCCTTATTCTTCATCGATCAGTTTC
TGGCAGATTCTTCTTTGGTTGGGGAGATAAAAGCCAGTGGGCGTAGAGGG
ATGGGCTCCGCCTTCCAATACCGTGCAAAAGACACAGTGGATAACAACCC
ACTGCCCATACGGCTTCAAAAATTCTATGGGGCTACCATTACCTCTTTTC
TATAGTGCCAGACTGCGTTTGAAATCTTCTTCCCTTTCTTGCAGGTTCTC
CTTCGGTGGGGAGTCCAGCGCGACACGATCGTCATCCCGAAGAGCGTCAC
GCCGGCGAGGATCCAGCAGAACATCCGGGTGTTCGACTTCGCGCTGACGT
CACAGGAGATGGAGACCATCGACGGCTTCAACGTCCCGTACCGCGCGTGT
GACGTCAGTTGGCTCGACTACATGCCCGACTATCCTTTCCACGAGCCCTT
TTAAACCGTCAAATGACGGTTACTCAAG Coding sequence (CDS) from alignment at Sc0000010:5208465..5209542- >transcript:BL97438_cuf3 ID=transcript:BL97438_cuf3|Name=transcript:BL97438_cuf3|organism=Branchiostoma lanceolatum|type=CDS|length=798bp|location=Sequence derived from alignment at Sc0000010:5208465..5209542- (Branchiostoma lanceolatum)
GTGGAGTGCCACCCGTACCTGAACCAGAAGCAGCTGCTACAGTTGGCCAA
AGAGAAGGGTTTGGTGTTCACAGCCTACAGCCCGCTGGGCTCCCCTGACA
GGCCCTGGGCCAAGCCGGGAGACCCCTCCATCATGGAGGACCCCAAACTC
AAGCCGATTGCAGACAAATATGGCAAGTCTGTGGCTCAGGTTCTCCTTCG
GTGGGGAGTCCAGCGCGACACGATCGTCATCCCGAAGAGCGTCACGCCGG
CGAGGATCCAGCAGAACATCCGGGTGTTCGACTTCGCGCTGACGTCACAG
GAGATGGAGACCATCGACGGCTTCAACGTCCCGTACCGCGCGTGTGACGT
CAGTTGGCTCGACTACATGCCCGACTATCCTTTCCACGAGCCCTTTTAAG
TGGAGTGCCACCCGTACCTGAACCAGAAGCAGCTGCTACAGTTGGCCAAA
GAGAAGGGTTTGGTGTTCACAGCCTACAGCCCGCTGGGCTCCCCTGACAG
GCCCTGGGCCAAGCCGGGAGACCCCTCCATCATGGAGGACCCCAAACTCA
AGCCGATTGCAGACAAATATGGCAAGTCTGTGGCTCAGGTTCTCCTTCGG
TGGGGAGTCCAGCGCGACACGATCGTCATCCCGAAGAGCGTCACGCCGGC
GAGGATCCAGCAGAACATCCGGGTGTTCGACTTCGCGCTGACGTCACAGG
AGATGGAGACCATCGACGGCTTCAACGTCCCGTACCGCGCGTGTGACGTC
AGTTGGCTCGACTACATGCCCGACTATCCTTTCCACGAGCCCTTTTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000010 | genome | Sc0000010:5208465..5209542 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL97438_cuf3 |
| Biotype | protein_coding |
|
