|
|
Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL97398_cuf8 >transcript:BL97398_cuf8-protein ID=transcript:BL97398_cuf8-protein|Name=transcript:BL97398_cuf8|organism=Branchiostoma lanceolatum|type=polypeptide|length=274bp
SDPWWLLDLGTVSSVGTVRILTRADCCGERLQNLQVRVGDSPDFLLNQAC
GAIYTGTPSSGERLELHCREGAAGQYVSVQTVKTTDQLSLCEVEVFPETD
VSPPLACGETTLFVTETRNGTLSSPSFGSGTYPPNSACRWLLTAPQNGII
VLSIVLMDLQDSXLSIVLMDLQDSADCTSDSVVVYDGPSPSYPVLGRLCG
TAESVLTSGSQMFVEFVSDGETESSGFMATFTAVSPDENIASGKSASQAA
DLSANRVAERAVDGDVATCAATTN Run BLAST on NCBI mRNA from alignment at Sc0000112:896698..898047- Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL97398_cuf8 ID=transcript:BL97398_cuf8|Name=transcript:BL97398_cuf8|organism=Branchiostoma lanceolatum|type=mRNA|length=1350bp|location=Sequence derived from alignment at Sc0000112:896698..898047- (Branchiostoma lanceolatum)
TCCGACCCCTGGTGGCTGCTGGACCTCGGGACCGTCTCCTCCGTAGGAAC
TGTGCGCATCCTGACCCGCGCGGACTGCTGTGGTGAGTAGCGCTCATGCT
GTTCTCGGAGTAATTAAACTAGCATTGATGTCAACACAGAAAAAAAAGTA
CTGCATATGTCTTACTCTCTGTGCAGGGGAGAGGCTTCAGAATTTACAGG
TGAGAGTTGGAGACTCACCCGACTTCCTGCTGAACCAAGCTTGTGGAGCC
ATCTACACGGGGACGCCCTCTAGCGGAGAGAGGCTAGAGCTGCACTGCCG
GGAAGGCGCTGCTGGGCAGTACGTGTCCGTGCAGACCGTCAAAACAACGG
ACCAGCTGTCGCTGTGTGAGGTGGAGGTGTTCCCGGAAACAGGTGACGTA
CCGGGTTACTTAAGAATCAATGAACAATACTGTGTCAAACACATTTTAGT
CGATATCGGGCGCATTTACATGGCCGGAGACCCTGAAATGAAAGTTTTCG
TTACTTTGATATCTATTGGGTGTATCATCAAACTATCCTTACGAACAGGT
TATTATAGTTAACTAGAATACTATTGTTAACCGGGTTACAATCGTTTACC
AGGCTATCACCTTTAAACAGTTACTGTCGAGACCAAATATCATCACTAAC
TATTTCCTGTCCCCTTCCTGCCCCCACAGACGTGAGTCCGCCCCTTGCCT
GCGGCGAGACGACCCTGTTTGTCACGGAGACACGGAACGGAACTCTCTCC
AGTCCCAGCTTTGGTTCGGGCACCTACCCTCCCAACAGTGCCTGCCGATG
GCTTCTAACGGCTCCACAAAACGGCATTATAGTTCTCAGCATAGTGTTGA
TGGACTTACAAGACAGTGNTCTCAGTATAGTGTTGATGGACTTACAAGAC
AGTGCCGACTGTACGTCGGATTCTGTTGTAGTCTACGATGGACCCTCCCC
TTCCTACCCAGTCCTCGGGCGCCTCTGCGGAACCGCTGAGTCCGTCCTCA
CGTCGGGGAGCCAGATGTTCGTGGAGTTCGTGTCAGACGGGGAAACGGAA
AGTTCCGGCTTCATGGCGACCTTCACTGCTGTTAGTCCGGGTATGTGCCA
TCACGCCTGCCATCCGTTACAATCTAATAGTATGTTATGCTTGATAATAT
TATAATCACGACTATTCAAACTCACAGGATTTCCAAATACCAGTCAACAT
TTCTGCCAATGAAAGTCTTTGCTTTGTTTCCCTGCAGACGAGAACATCGC
CTCGGGAAAGTCCGCCTCCCAGGCGGCGGACCTGAGCGCGAACCGCGTTG
CCGAGAGGGCCGTGGACGGGGACGTGGCGACCTGCGCGGCGACAACAAAC
Coding sequence (CDS) from alignment at Sc0000112:896698..898047- >transcript:BL97398_cuf8 ID=transcript:BL97398_cuf8|Name=transcript:BL97398_cuf8|organism=Branchiostoma lanceolatum|type=CDS|length=3288bp|location=Sequence derived from alignment at Sc0000112:896698..898047- (Branchiostoma lanceolatum)
TCCGACCCCTGGTGGCTGCTGGACCTCGGGACCGTCTCCTCCGTAGGAAC
TGTGCGCATCCTGACCCGCGCGGACTGCTGTGGGGAGAGGCTTCAGAATT
TACAGGTGAGAGTTGGAGACTCACCCGACTTCCTGCTGAACCAAGCTTGT
GGAGCCATCTACACGGGGACGCCCTCTAGCGGAGAGAGGCTAGAGCTGCA
CTGCCGGGAAGGCGCTGCTGGGCAGTACGTGTCCGTGCAGACCGTCAAAA
CAACGGACCAGCTGTCGCTGTGTGAGGTGGAGGTGTTCCCGGAAACAGAC
GTGAGTCCGCCCCTTGCCTGCGGCGAGACGACCCTGTTTGTCACGGAGAC
ACGGAACGGAACTCTCTCCAGTCCCAGCTTTGGTTCGGGCACCTACCCTC
CCAACAGTGCCTGCCGATGGCTTCTAACGGCTCCACAAAACGGCATTATA
GTTCTCAGCATAGTGTTGATGGACTTACAAGACAGTGNTCTCAGTATAGT
GTTGATGGACTTACAAGACAGTGCCGACTGTACGTCGGATTCTGTTGTAG
TCTACGATGGACCCTCCCCTTCCTACCCAGTCCTCGGGCGCCTCTGCGGA
ACCGCTGAGTCCGTCCTCACGTCGGGGAGCCAGATGTTCGTGGAGTTCGT
GTCAGACGGGGAAACGGAAAGTTCCGGCTTCATGGCGACCTTCACTGCTG
TTAGTCCGGACGAGAACATCGCCTCGGGAAAGTCCGCCTCCCAGGCGGCG
GACCTGAGCGCGAACCGCGTTGCCGAGAGGGCCGTGGACGGGGACGTGGC
GACCTGCGCGGCGACAACAAACTCCGACCCCTGGTGGCTGCTGGACCTCG
GGACCGTCTCCTCCGTAGGAACTGTGCGCATCCTGACCCGCGCGGACTGC
TGTGGGGAGAGGCTTCAGAATTTACAGGTGAGAGTTGGAGACTCACCCGA
CTTCCTGCTGAACCAAGCTTGTGGAGCCATCTACACGGGGACGCCCTCTA
GCGGAGAGAGGCTAGAGCTGCACTGCCGGGAAGGCGCTGCTGGGCAGTAC
GTGTCCGTGCAGACCGTCAAAACAACGGACCAGCTGTCGCTGTGTGAGGT
GGAGGTGTTCCCGGAAACAGACGTGAGTCCGCCCCTTGCCTGCGGCGAGA
CGACCCTGTTTGTCACGGAGACACGGAACGGAACTCTCTCCAGTCCCAGC
TTTGGTTCGGGCACCTACCCTCCCAACAGTGCCTGCCGATGGCTTCTAAC
GGCTCCACAAAACGGCATTATAGTTCTCAGCATAGTGTTGATGGACTTAC
AAGACAGTGNTCTCAGTATAGTGTTGATGGACTTACAAGACAGTGCCGAC
TGTACGTCGGATTCTGTTGTAGTCTACGATGGACCCTCCCCTTCCTACCC
AGTCCTCGGGCGCCTCTGCGGAACCGCTGAGTCCGTCCTCACGTCGGGGA
GCCAGATGTTCGTGGAGTTCGTGTCAGACGGGGAAACGGAAAGTTCCGGC
TTCATGGCGACCTTCACTGCTGTTAGTCCGGACGAGAACATCGCCTCGGG
AAAGTCCGCCTCCCAGGCGGCGGACCTGAGCGCGAACCGCGTTGCCGAGA
GGGCCGTGGACGGGGACGTGGCGACCTGCGCGGCGACAACAAACTCCGAC
CCCTGGTGGCTGCTGGACCTCGGGACCGTCTCCTCCGTAGGAACTGTGCG
CATCCTGACCCGCGCGGACTGCTGTGGGGAGAGGCTTCAGAATTTACAGG
TGAGAGTTGGAGACTCACCCGACTTCCTGCTGAACCAAGCTTGTGGAGCC
ATCTACACGGGGACGCCCTCTAGCGGAGAGAGGCTAGAGCTGCACTGCCG
GGAAGGCGCTGCTGGGCAGTACGTGTCCGTGCAGACCGTCAAAACAACGG
ACCAGCTGTCGCTGTGTGAGGTGGAGGTGTTCCCGGAAACAGACGTGAGT
CCGCCCCTTGCCTGCGGCGAGACGACCCTGTTTGTCACGGAGACACGGAA
CGGAACTCTCTCCAGTCCCAGCTTTGGTTCGGGCACCTACCCTCCCAACA
GTGCCTGCCGATGGCTTCTAACGGCTCCACAAAACGGCATTATAGTTCTC
AGCATAGTGTTGATGGACTTACAAGACAGTGNTCTCAGTATAGTGTTGAT
GGACTTACAAGACAGTGCCGACTGTACGTCGGATTCTGTTGTAGTCTACG
ATGGACCCTCCCCTTCCTACCCAGTCCTCGGGCGCCTCTGCGGAACCGCT
GAGTCCGTCCTCACGTCGGGGAGCCAGATGTTCGTGGAGTTCGTGTCAGA
CGGGGAAACGGAAAGTTCCGGCTTCATGGCGACCTTCACTGCTGTTAGTC
CGGACGAGAACATCGCCTCGGGAAAGTCCGCCTCCCAGGCGGCGGACCTG
AGCGCGAACCGCGTTGCCGAGAGGGCCGTGGACGGGGACGTGGCGACCTG
CGCGGCGACAACAAACTCCGACCCCTGGTGGCTGCTGGACCTCGGGACCG
TCTCCTCCGTAGGAACTGTGCGCATCCTGACCCGCGCGGACTGCTGTGGG
GAGAGGCTTCAGAATTTACAGGTGAGAGTTGGAGACTCACCCGACTTCCT
GCTGAACCAAGCTTGTGGAGCCATCTACACGGGGACGCCCTCTAGCGGAG
AGAGGCTAGAGCTGCACTGCCGGGAAGGCGCTGCTGGGCAGTACGTGTCC
GTGCAGACCGTCAAAACAACGGACCAGCTGTCGCTGTGTGAGGTGGAGGT
GTTCCCGGAAACAGACGTGAGTCCGCCCCTTGCCTGCGGCGAGACGACCC
TGTTTGTCACGGAGACACGGAACGGAACTCTCTCCAGTCCCAGCTTTGGT
TCGGGCACCTACCCTCCCAACAGTGCCTGCCGATGGCTTCTAACGGCTCC
ACAAAACGGCATTATAGTTCTCAGCATAGTGTTGATGGACTTACAAGACA
GTGNTCTCAGTATAGTGTTGATGGACTTACAAGACAGTGCCGACTGTACG
TCGGATTCTGTTGTAGTCTACGATGGACCCTCCCCTTCCTACCCAGTCCT
CGGGCGCCTCTGCGGAACCGCTGAGTCCGTCCTCACGTCGGGGAGCCAGA
TGTTCGTGGAGTTCGTGTCAGACGGGGAAACGGAAAGTTCCGGCTTCATG
GCGACCTTCACTGCTGTTAGTCCGGACGAGAACATCGCCTCGGGAAAGTC
CGCCTCCCAGGCGGCGGACCTGAGCGCGAACCGCGTTGCCGAGAGGGCCG
TGGACGGGGACGTGGCGACCTGCGCGGCGACAACAAAC
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000112 | genome | Sc0000112:896698..898047 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL97398_cuf8 |
| Biotype | protein_coding |
|
