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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL97360_cuf3 >transcript:BL97360_cuf3-protein ID=transcript:BL97360_cuf3-protein|Name=transcript:BL97360_cuf3|organism=Branchiostoma lanceolatum|type=polypeptide|length=129bp
MEIVKVVGVFVVFLSYYSVESLQPDGKHVCSHVRTTETGLEEDLVCCRGF
VTTLVGDREECVRDDSARAATCGLPADAGPCEGSHRRWHFDTGSGECQQF
AYGGCGGNSNRFHSRKRCQRTCEGKTESH Run BLAST on NCBI mRNA from alignment at Sc0000108:953279..957748- Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL97360_cuf3 ID=transcript:BL97360_cuf3|Name=transcript:BL97360_cuf3|organism=Branchiostoma lanceolatum|type=mRNA|length=4470bp|location=Sequence derived from alignment at Sc0000108:953279..957748- (Branchiostoma lanceolatum)
ACTTAAGTCAACTTAGAAAGCGATTTGTCGGGTCATGGCTGATTCGAGTC
TGAGTTTCAAAGCGATCGATTGGTCGGGGTAATGGTATGGGAAACATTGA
CGTCGGAAACCACGACTGGGATTATTCTTTGCTTTATGATAAGAAGTGAC
TGATAAAGAAAAATCGAGTCGGTAGAATTTGACATACCCAATAATCTGAA
CCCGTAGGGAACACAGAAAAGACATGGGCCATTTGATAAAAGACATAGAT
ACAAGATGACGTGTACCAGTTTGTGAACGGCCTTGCCTAGGTTTAGACAT
CATGATCAATTTTATAACGACACACGGTGGAGAGATATCGTGAGTAGTAA
GGACACAAATACGCCATTCATAAATGGAGGTCTCGTGTTCGAGGAGGTGC
CTCGAGCAGATATTACAACAGCCTTATTACTCATATGGATAACGTTACCT
ACTTGCTGTAATACAGCTGTATTATACAACATGATGAACAGGGTGAATAA
AGAATTTCACTATGAAACAACAGCGCCCTCTGCCAGACTATCCGTTCACT
GCATGTCGTGCAGGCCTGTTGCCCTCCGATTGACACCAACTAGGTTGACT
CTGCGTTAATGATTGACGCGATAGTCGAGGCCTTGGGCCAGCAACAGTGG
TACGACAGGAAAGTGACCCCATAACGACCATGGTCCACCAACTGTATCGC
GGGTCGGAGATTTGAGCTGAAACAGTAATCTCCGTCCAACCGATGAATTA
GTCTGGGTTGTAGATTCTCGCCACTGCTGGAATGATTGACACCCTTGAAT
AAATGTATTCAGCACATAGGATCAAACAGAGCAATCTCTGTGGCTGTGTG
TGTGTGTTCCTGTGTCTGAGTATTGCGTTGGCGGGAATTACGTCTACCAA
AGTTTTGCCATGAGGAAGTTGGTATGATGTTTAGTTTCCTAAGGTTGGCA
CACCTGTCTGGCATATGTCCTTTTACCCCCTTACATCGCGAATTTCACGA
GAATTTTGTTTCTTTCACCCCATTCATACCGCTACAGGCTGCATAGTGTG
TAAGACATATCCTTTGCGGTAGTCTTCATGCATCGCAGCGAGACTCACCA
TGGTGAATACTACATAACGTTACATACATTCATGTAATCTAACAAAAAAA
AGATTACAAGCAAAATTGTCTGCCGAAAGGCTGTTCTTATCCATTTGAAT
CTTGAATACACGATGATTTTCAGGTCTTACACCTGTTCGGTCATAAACGT
AAGGGCGAGTGCGTGCATTTTAGTACGATGACTTCATAAGATTAGTTCTT
GTTGTTTACGGTGGAATGTGGATTGGGGCAGTTTTGAACGCCTACGTCCA
CAACCCTCACTGACTCATGGTCCGTCGTGTGCAAAGGTCGCGTGACTCTC
GAGCTCTCAGCCAATCATCGTCAAGGACCTAGGTATTTTGAGGTTTGATT
GGACCGTACCTGAGTGACGTAGGCAATCAGTTGAAGGAGAACAGTTACAT
TTAGGGCGCGAGCGACGACTAGCCGTTACAGACCACAGGTGTTTTTCGAA
GCTTCAACATGGAGATAGTCAAAGTTGTCGGTGTTTTCGTCGTTTTCCTG
AGCTACTACAGTGTAGAGTCGCTACAGCCTGATGGCAAGCATGTGTGCAG
CCACGTGAGGTAAGCGGTACCAAAAAACTATACATATAACAGCATGTGAT
TTAATATTATGTACATGTATATAATAACGTTATGTGTGTACAGGGATACC
ACAATTTTGTATATTCTAGTAAAGTCTGATATTGGTATGAGGCTTGGCAT
TCATCGAGTTGGTCTACAGTTGAACTGAAGTCGACGCATATGGGTTTAGT
GACTGCGTTGAAACTGTGTTATGTTATGACTACGACGGTGTATGCAAGTT
TGAAATCAGACAACGGTTGTTTTTCTCAAGTAGCAAACGGTCCGAGGTTT
GATACTAGACTTCTCTAGTAGTTGTGTAGTAAAAAATCAAACCACAAAAT
GTATTAGTCAGTGAGTCGCCACGACTTTTGTCGCCCACTGCCATGATCCG
CTGGATGACGCTGTCGCGCAGCTGAATAGATCTAGCGAAGCAAGTGGAAT
TCTACCGTGCGTTGTCATAAAATACTACCTTGAAATGTTGGAGTCTAAAA
AAAACCCAACTCTAAACCCTACATTCATTGTCTTGCGGGACAGGAAAACT
AACGTTACAAGGCGAAATCGCAATGTCGCACCACAGCCGTTTTGAACGTT
TATAAGTTACACATAAGAGCAAACATCAGGGATCGGCGAAGGTGAGGTCA
TCTATTTATTGCCGGGCGAACATAGACTCTTATTGAACTACCGGCGACGT
TGGTTTAGGATTCTGTCAATGCTGATCTTCCATAGATCGTTCTGGATTTG
TTTTGTTTTGTTTTGTTTTGTTTTGTTTTGCCAAGCACAGCGACTTATGC
CCTCTCCTCTCGGTTAATGCGTTGGGTTCTTTAACGTTATTTCCCTCCAT
TTGAAACAACAAGCAGACCTTAAGCTTACACAAATGAAAACAGTTCCCTT
TTCGACGATCCCTAAAAAGGAATAAGTGTTACGATATAAAATGATATCTG
CATTGAGTCATCAAAATGCCATGACAATGCGTGCCCAAACTCTAGACCCA
CTCATAGTATACACACCTACGCCCGGGCTGTATTTACACAGGAGTTCAGC
GGCTTTTATGGTTCATGATGTATGTTTATATGATGGCTGCTTCCTCTCGA
GTTGAAAGTGGAGTCAGAAGGACGCTATTTCCAACAGAACCTGCCAAAAG
GAAGTGACTTCACCGACAAAGTAGCAACATTTACCAGAAACGTTCATTGC
GTAAGCTTTCGATTTTCGGTACGTAAATCTGGTGGTAGTAAATCTAGTCA
ACATTGGTCAACATTGTACGTTTGACTCTGCTTTTAAACTTAATGTCAGA
AATCGAACTCATAAAAGCACAGCTAATCGACCATCAGAAAAGGATGTCTG
TCAGAAAGGAACAATAGCTCTTCCATAGGTCTGCAAATCATAGAATGGGT
AACCAGAAGACAGAAGACAAAAAGAATATATATCACATCCCCCAAGGGAA
GTGTATCTCCTAAATGTTGCAAATAAGCACGACCCAACCGTACACAGCCT
GTCAAACATGTTTAGGCAAGTCAGATTGTGTAGATATTGTTACAGCTATG
ACACGGTCTCTTCAACGTTTCCTGCATACACCTTATGTAAACTCCTGCGG
TCAAGTATAAGGCTACACGGCGCCAACCTGTCCCAACAACGCCACAAAAA
TGACCGTTTTCAAAGTGGTTTCCCAGTAACTACAACCCCCCATTTGGCTT
TCCTTTGAGCGCGCGTCAGGCCAGATGCATTGATGACCTTTTGATTGATT
ACAAATTATGGGAACATGGCCTTTAGAACTTCACCAGGTACATGTATGCA
GTGGTCAGGCCTCACTCCGGTGACAGAATGAGCAAAGTGATTTGTTCCTT
TGTTACTCCTTGCTACTTAAGTTCAGACCGAATCAAAAGATTGTTAGGTC
AAGGTAGGTGTGTAGCGTGGGGTTGGGTTTTTGTTGAACTACTATTGCCT
GCGATATTGTAGGAATACATAAGAACAAGCAATCGGGAAGACCAAAACAT
TTTAGTCTTTGCTAGAATACAACTATCAGCTAAAGACCAATTGACTGTGC
ATCGACACAGGTTTACGTTAAATTTGAGACCTGTATATACACGTAATGTT
GAAACATGAAACTTATAATGTCTAATCTTGCCCGCGAGAGACAGCTGTGA
CGTAGCTACGTGGGTTGCTTACTGCATATATGCAAGATTGCAGCATATCC
TCAAGATTTGTTCTTTTCCACAGAACTACAGAAACTGGCCTGGAGGAGGA
CCTGGTGTGTTGTCGTGGTTTCGTCACTACCTTGGTGGGAGACAGGGAGG
AATGTGTGAGAGGTATGATTAAACAGGGTTATTTGAGCTTGATGGTGTCG
ATGATTTTATTTCAAAAGCATACCACTAAGCCACGGCCAGATTTGCTTGA
AAATTCCTCTTCTATCCCATTGCAGACGAAGGGAGGAAAAACGTTGTTCT
TTCCTCGGAAATGTGGCTCAAATGGACGAGTAGAGCTAGAGAAACACAAA
CTTTTATCATAAGATATCAGTTTTAGTTTTTACGACATTTCAATGGAGTT
TCCTCCAGTACGAAAGACATGTATTGAGCGTGTAGTTTCCTGCATACTTA
CCTGCCTACTCGTCTTGTTTCAGACGACAGTGCACGCGCTGCTACCTGTG
GCTTGCCGGCGGACGCAGGCCCGTGTGAAGGAAGCCACCGGCGCTGGCAC
TTCGACACCGGCAGCGGGGAGTGTCAGCAGTTCGCGTACGGTGGGTGTGG
CGGGAACAGCAACCGCTTCCACAGCAGGAAGAGGTGCCAGAGGACGTGCG
AGGGCAAAACCGAATCGCAT Coding sequence (CDS) from alignment at Sc0000108:953279..957748- >transcript:BL97360_cuf3 ID=transcript:BL97360_cuf3|Name=transcript:BL97360_cuf3|organism=Branchiostoma lanceolatum|type=CDS|length=1161bp|location=Sequence derived from alignment at Sc0000108:953279..957748- (Branchiostoma lanceolatum)
ATGGAGATAGTCAAAGTTGTCGGTGTTTTCGTCGTTTTCCTGAGCTACTA
CAGTGTAGAGTCGCTACAGCCTGATGGCAAGCATGTGTGCAGCCACGTGA
GAACTACAGAAACTGGCCTGGAGGAGGACCTGGTGTGTTGTCGTGGTTTC
GTCACTACCTTGGTGGGAGACAGGGAGGAATGTGTGAGAGACGACAGTGC
ACGCGCTGCTACCTGTGGCTTGCCGGCGGACGCAGGCCCGTGTGAAGGAA
GCCACCGGCGCTGGCACTTCGACACCGGCAGCGGGGAGTGTCAGCAGTTC
GCGTACGGTGGGTGTGGCGGGAACAGCAACCGCTTCCACAGCAGGAAGAG
GTGCCAGAGGACGTGCGAGGGCAAAACCGAATCGCATATGGAGATAGTCA
AAGTTGTCGGTGTTTTCGTCGTTTTCCTGAGCTACTACAGTGTAGAGTCG
CTACAGCCTGATGGCAAGCATGTGTGCAGCCACGTGAGAACTACAGAAAC
TGGCCTGGAGGAGGACCTGGTGTGTTGTCGTGGTTTCGTCACTACCTTGG
TGGGAGACAGGGAGGAATGTGTGAGAGACGACAGTGCACGCGCTGCTACC
TGTGGCTTGCCGGCGGACGCAGGCCCGTGTGAAGGAAGCCACCGGCGCTG
GCACTTCGACACCGGCAGCGGGGAGTGTCAGCAGTTCGCGTACGGTGGGT
GTGGCGGGAACAGCAACCGCTTCCACAGCAGGAAGAGGTGCCAGAGGACG
TGCGAGGGCAAAACCGAATCGCATATGGAGATAGTCAAAGTTGTCGGTGT
TTTCGTCGTTTTCCTGAGCTACTACAGTGTAGAGTCGCTACAGCCTGATG
GCAAGCATGTGTGCAGCCACGTGAGAACTACAGAAACTGGCCTGGAGGAG
GACCTGGTGTGTTGTCGTGGTTTCGTCACTACCTTGGTGGGAGACAGGGA
GGAATGTGTGAGAGACGACAGTGCACGCGCTGCTACCTGTGGCTTGCCGG
CGGACGCAGGCCCGTGTGAAGGAAGCCACCGGCGCTGGCACTTCGACACC
GGCAGCGGGGAGTGTCAGCAGTTCGCGTACGGTGGGTGTGGCGGGAACAG
CAACCGCTTCCACAGCAGGAAGAGGTGCCAGAGGACGTGCGAGGGCAAAA
CCGAATCGCAT
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000108 | genome | Sc0000108:953279..957748 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL97360_cuf3 |
| Biotype | protein_coding |
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