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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL97339_cuf14 >transcript:BL97339_cuf14-protein ID=transcript:BL97339_cuf14-protein|Name=transcript:BL97339_cuf14|organism=Branchiostoma lanceolatum|type=polypeptide|length=174bp
MSQQPPSGRARGRARGRARGAIEEPPRRPGAGVAPPTAPPPVATVPPTDA
PAPVASGRGRQRGGVTSRPPGAPPTSQMEALSLGEKGAGAAPASQPFGGR
RRRGDVVIEEPHTRPAHIQDKKGSTGHPVPLVTNFFRVSSTPSWALYQYN
VSFAPEIDYRGVRFSMVKEHLELI Run BLAST on NCBI mRNA from alignment at Sc0000015:1557377..1559430+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL97339_cuf14 ID=transcript:BL97339_cuf14|Name=transcript:BL97339_cuf14|organism=Branchiostoma lanceolatum|type=mRNA|length=2054bp|location=Sequence derived from alignment at Sc0000015:1557377..1559430+ (Branchiostoma lanceolatum)
AGCCTAGAGCGCTGATACTGTAAACAGTTGGCAGGTAAAACCAGGTACCA
AAGATGTCACAGCAGCCACCTTCAGGACGTGCACGTGGCCGTGCCCGCGG
TCGTGCCCGGGGAGCGATAGAAGAGCCGCCACGTCGCCCGGGTGCAGGGG
TAGCCCCACCGACAGCCCCGCCTCCCGTAGCCACTGTCCCGCCGACCGAC
GCGCCGGCCCCCGTAGCGAGCGGCCGTGGTCGTCAGAGAGGAGGGGTGAC
ATCCAGGCCACCGGGAGGTCAGTAAATCGTTTGTTGTCTGCTTTTGTCTC
CATTATTTTTTCACTTAGACAAGGATGTTGTTGCTGGCGTATGTCCTCTC
TCTCCCTCCCTCTCTCTCTCTCCCTAGGCCTCTATCTTTGTGTGTGTTCT
TTCTCTCCCTCTCTCTCTCGCTCTCTGTCCCCTCTCTTTCTCTCTGTCCT
CTCTGTGTCTGTGTGTTTGTGTGCTTGCGTCTCTGTGTGTGTGCCTGTGT
GTGTGTTGCTGGGGAGGGGGGGGAGAGACTGACATCCATGGCACTGGGAT
GTCATTTTGTCATTTTTAGCTAGTTCAACTTCAGGCCTCCTCCCTAAGAA
GGGACTTAGTTGTAGACTTCTGTGTGTGTGTATGTGTGTTCTAAGTTTTC
TGACCAACAATATTATTATTAAAGCAAATTTACCCTCAATTTGTTTCAAG
TAGCATTTGAATTAATTGTTATTCCTCCAAGGATTTTTGTGCAATGGCAA
GACGTCAGAGCAAGATGTAGAGCCACCTTCAAGGCATCATGTGTTTTGAA
GTTTTTTGTGGACAGAACTGGGATGTTTGAGACAGTTTAAGGCCAGGAGT
AATTCTAGATGTCCAATTTCACACCAGGACTTCCAGACTGAAAGTGATGT
ATGATGTGAGGGCGGCAGGGTTCAGTACTCAGAGACTTGTTTTGACTTCA
TGAAGAAGGGAACCAAGTGTTCCCAATGTCACTGTAGACAGATCTGGGAA
CTCTGAGACTGGTTCAAGCACCTGTTTTAACTAGCTGTGTAACGGTCTGT
GGTGCTGAAAACACTGCAGGGTGGTAAGATTCCACTGTAGAAGTCTTGTA
CTTGCCCACTTTTCATAGATAAAAAGAAAGTCAACTTATGAAAGTCTTCT
AAGTGTACTACACTATGATTAAGTATCAAAAGAGAATTTATGCTATGCAT
CTAACAACAATTCATTCGTCAAAATTTAGTTTATAAGTTTGCGTTTATTT
TGATCTATGCTTACTCAAAGTACAAGACGACTATAATTGATGCAATGTTG
TATTCCCCAGCTCCCCCCACGTCCCAGATGGAGGCCTTGTCCCTGGGTGA
GAAGGGTGCAGGAGCTGCGCCAGCCTCACAGCCGTTCGGAGGGAGACGCA
GGAGGGGCGATGTCGTCATCGAGGAGCCACACACCCGCCCTGCTCACATT
CAGGACAAGAAAGGTGCGTATCTTAGGTAGAGCTGTGTTATGCCTGTGTA
CCTAAACAAATTTTAGGTTCATGTGCAGGGTTTAGGATCAGGTCTGGGCT
TTTAGGTAGTCCTTCTTGTACCTGAACTATTTGTTCAGATGATCGGTGAT
TTTCAACAAGAACAAAAGCATGTTTGAACTGATAACAACATAATGCTTAA
TTGTGCTATAACCACCACTACTGAGATATGAGGTTTTGTATGCATGGAAA
CAAAAATTAAATTTGGCTAAGGCACTGCAAATGTGTTGTTCTATGCTGCA
GGATAGTATAGATATGGCTTCAGTGTACTGCCACAGCATTTTAAAGAAAT
TTTATCCGTCAAAGCTGCCATCCCTTGATGAATTTTCACTTACAGTGTGC
TACAGGGTTATTAAGTTATGATGTCATTTGCCATCTTACCCCCCACAGGC
TCCACGGGCCATCCGGTTCCCCTGGTAACCAACTTCTTCCGCGTGAGTTC
CACCCCGTCCTGGGCGCTGTACCAGTACAACGTCAGCTTCGCGCCGGAGA
TAGACTACCGAGGCGTCCGCTTCTCCATGGTGAAGGAACACCTGGAGCTG
ATCG Coding sequence (CDS) from alignment at Sc0000015:1557377..1559430+ >transcript:BL97339_cuf14 ID=transcript:BL97339_cuf14|Name=transcript:BL97339_cuf14|organism=Branchiostoma lanceolatum|type=CDS|length=1566bp|location=Sequence derived from alignment at Sc0000015:1557377..1559430+ (Branchiostoma lanceolatum)
ATGTCACAGCAGCCACCTTCAGGACGTGCACGTGGCCGTGCCCGCGGTCG
TGCCCGGGGAGCGATAGAAGAGCCGCCACGTCGCCCGGGTGCAGGGGTAG
CCCCACCGACAGCCCCGCCTCCCGTAGCCACTGTCCCGCCGACCGACGCG
CCGGCCCCCGTAGCGAGCGGCCGTGGTCGTCAGAGAGGAGGGGTGACATC
CAGGCCACCGGGAGCTCCCCCCACGTCCCAGATGGAGGCCTTGTCCCTGG
GTGAGAAGGGTGCAGGAGCTGCGCCAGCCTCACAGCCGTTCGGAGGGAGA
CGCAGGAGGGGCGATGTCGTCATCGAGGAGCCACACACCCGCCCTGCTCA
CATTCAGGACAAGAAAGGCTCCACGGGCCATCCGGTTCCCCTGGTAACCA
ACTTCTTCCGCGTGAGTTCCACCCCGTCCTGGGCGCTGTACCAGTACAAC
GTCAGCTTCGCGCCGGAGATAGACTACCGAGGCGTCCGCTTCTCCATGGT
GAAGGAACACCTGGAGCTGATCATGTCACAGCAGCCACCTTCAGGACGTG
CACGTGGCCGTGCCCGCGGTCGTGCCCGGGGAGCGATAGAAGAGCCGCCA
CGTCGCCCGGGTGCAGGGGTAGCCCCACCGACAGCCCCGCCTCCCGTAGC
CACTGTCCCGCCGACCGACGCGCCGGCCCCCGTAGCGAGCGGCCGTGGTC
GTCAGAGAGGAGGGGTGACATCCAGGCCACCGGGAGCTCCCCCCACGTCC
CAGATGGAGGCCTTGTCCCTGGGTGAGAAGGGTGCAGGAGCTGCGCCAGC
CTCACAGCCGTTCGGAGGGAGACGCAGGAGGGGCGATGTCGTCATCGAGG
AGCCACACACCCGCCCTGCTCACATTCAGGACAAGAAAGGCTCCACGGGC
CATCCGGTTCCCCTGGTAACCAACTTCTTCCGCGTGAGTTCCACCCCGTC
CTGGGCGCTGTACCAGTACAACGTCAGCTTCGCGCCGGAGATAGACTACC
GAGGCGTCCGCTTCTCCATGGTGAAGGAACACCTGGAGCTGATCATGTCA
CAGCAGCCACCTTCAGGACGTGCACGTGGCCGTGCCCGCGGTCGTGCCCG
GGGAGCGATAGAAGAGCCGCCACGTCGCCCGGGTGCAGGGGTAGCCCCAC
CGACAGCCCCGCCTCCCGTAGCCACTGTCCCGCCGACCGACGCGCCGGCC
CCCGTAGCGAGCGGCCGTGGTCGTCAGAGAGGAGGGGTGACATCCAGGCC
ACCGGGAGCTCCCCCCACGTCCCAGATGGAGGCCTTGTCCCTGGGTGAGA
AGGGTGCAGGAGCTGCGCCAGCCTCACAGCCGTTCGGAGGGAGACGCAGG
AGGGGCGATGTCGTCATCGAGGAGCCACACACCCGCCCTGCTCACATTCA
GGACAAGAAAGGCTCCACGGGCCATCCGGTTCCCCTGGTAACCAACTTCT
TCCGCGTGAGTTCCACCCCGTCCTGGGCGCTGTACCAGTACAACGTCAGC
TTCGCGCCGGAGATAGACTACCGAGGCGTCCGCTTCTCCATGGTGAAGGA
ACACCTGGAGCTGATC
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000015 | genome | Sc0000015:1557377..1559430 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL97339_cuf14 |
| Biotype | protein_coding |
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