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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL97295_cuf3 >transcript:BL97295_cuf3-protein ID=transcript:BL97295_cuf3-protein|Name=transcript:BL97295_cuf3|organism=Branchiostoma lanceolatum|type=polypeptide|length=210bp
SFQTTSNSRIETAFQAKAVKCFCVEDNRPFVVDFSAMTLTVQTSTAVGKV
RREDLAIYSDTVLPGKWDPQPMDPRTGKPKLCHFVTLDPLSTEFFTVQDK
LFSSLGDMRAIVLRIERVQNQLLWMEYCVQKGSTSSSSPTRVEETDLWHG
TSTEACQMITLHGFNSHVTENYAGGSQKVTTFARNAVYATKNLCTPDYCG
RKKIILAKVL Run BLAST on NCBI mRNA from alignment at Sc0000149:659264..660550+ Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL97295_cuf3 ID=transcript:BL97295_cuf3|Name=transcript:BL97295_cuf3|organism=Branchiostoma lanceolatum|type=mRNA|length=1287bp|location=Sequence derived from alignment at Sc0000149:659264..660550+ (Branchiostoma lanceolatum)
GTTCATTTCAAACAACGTCCAACAGTAGGATAGAAACAGCTTTTCAGGCA
AAAGCCGTGAAGTGCTTCTGTGTGGAGGACAACAGGCCGTTTGTTGTAGA
CTTCTCTGCCATGACGTTGACTGTGCAAACGTCTACAGCTGTTGGCAAGG
TCCGTAGAGAAGACTTGGCTATCTATTCAGGTATGAATAATCATAACATC
TTGTTACTTATCTTCTTTAGGGCCCTGTCACACTTGTGCGTATATCATGT
CCGTGTGAGTTGCGTATTAACTTTTTTTGTCATACGCAGGCGTACGCGCA
ATACGCACCTCATGAAAATCATGCGTGTCTCATACGCAATGGATGCACTG
AATTCGTTATTCGCACTCTATATGTGCGTCACTCATAACTTAAGGAATTT
GATATTTTGAGCGTACAACTGCGTATTATCAAAATTCAATACGGAACTCA
CACTGTGCTCAAGTGTGACAGGGACTTTAGGCATAACGTTGAACTGAGAT
ATTTCTAATGTTTTGTTGATTTAGACACCGTGTTGCCCGGTAAATGGGAC
CCTCAGCCGATGGACCCTAGGACGGGGAAGCCTAAGCTGTGCCATTTTGT
GACGCTGGACCCCCTCTCAACAGAATTCTTCACGGTCCAAGACAAGTTGT
TCTCCAGCCTGGGGGACATGAGGGCGATCGTCCTGCGGATAGAACGAGTA
CAGAACCAGCTGCTGTGGATGGAGTACTGCGTACAGAAAGGAAGTACAAG
CAGCAGCAGTCCAACACGGTACGACCTCTCGACTTCAATTTCCAAATACA
TGTACCTCCCTCATAAAACTTGAACTCAATCTATTGCAGACAATATCTTT
GTATGTGAATTTTAACCACTGCACTAGATCTTGGGTAGTACTGTTTTCAA
CGTGGACTTTAAACTTTGAACGGTTGTTGCAGAGTGGAGGAGACAGATCT
GTGGCACGGTACCTCAACTGAAGCCTGTCAGATGATCACCCTTCATGGGT
TCAACAGTCACGTCACTGAAAACTATGGTACGTCCCTGTTCTGACTTGCA
TATGATAGGCCACTACAATACGCAAATATATTTCTATCTTTTTAGGAAGA
CTATAGCTGCATTTATTTAAATCCATTCGATAAGCGACAAGAACGAATAT
AATTTTCAATCCATTTCTCTACAGCTGGAGGGTCGCAGAAAGTGACTACC
TTTGCCCGGAATGCGGTATATGCCACAAAGAACCTCTGCACCCCAGACTA
CTGTGGACGTAAGAAGATCATTCTTGCAAAGGTTCTC Coding sequence (CDS) from alignment at Sc0000149:659264..660550+ >transcript:BL97295_cuf3 ID=transcript:BL97295_cuf3|Name=transcript:BL97295_cuf3|organism=Branchiostoma lanceolatum|type=CDS|length=2520bp|location=Sequence derived from alignment at Sc0000149:659264..660550+ (Branchiostoma lanceolatum)
TCATTTCAAACAACGTCCAACAGTAGGATAGAAACAGCTTTTCAGGCAAA
AGCCGTGAAGTGCTTCTGTGTGGAGGACAACAGGCCGTTTGTTGTAGACT
TCTCTGCCATGACGTTGACTGTGCAAACGTCTACAGCTGTTGGCAAGGTC
CGTAGAGAAGACTTGGCTATCTATTCAGACACCGTGTTGCCCGGTAAATG
GGACCCTCAGCCGATGGACCCTAGGACGGGGAAGCCTAAGCTGTGCCATT
TTGTGACGCTGGACCCCCTCTCAACAGAATTCTTCACGGTCCAAGACAAG
TTGTTCTCCAGCCTGGGGGACATGAGGGCGATCGTCCTGCGGATAGAACG
AGTACAGAACCAGCTGCTGTGGATGGAGTACTGCGTACAGAAAGGAAGTA
CAAGCAGCAGCAGTCCAACACGAGTGGAGGAGACAGATCTGTGGCACGGT
ACCTCAACTGAAGCCTGTCAGATGATCACCCTTCATGGGTTCAACAGTCA
CGTCACTGAAAACTATGCTGGAGGGTCGCAGAAAGTGACTACCTTTGCCC
GGAATGCGGTATATGCCACAAAGAACCTCTGCACCCCAGACTACTGTGGA
CGTAAGAAGATCATTCTTGCAAAGGTTCTCTCATTTCAAACAACGTCCAA
CAGTAGGATAGAAACAGCTTTTCAGGCAAAAGCCGTGAAGTGCTTCTGTG
TGGAGGACAACAGGCCGTTTGTTGTAGACTTCTCTGCCATGACGTTGACT
GTGCAAACGTCTACAGCTGTTGGCAAGGTCCGTAGAGAAGACTTGGCTAT
CTATTCAGACACCGTGTTGCCCGGTAAATGGGACCCTCAGCCGATGGACC
CTAGGACGGGGAAGCCTAAGCTGTGCCATTTTGTGACGCTGGACCCCCTC
TCAACAGAATTCTTCACGGTCCAAGACAAGTTGTTCTCCAGCCTGGGGGA
CATGAGGGCGATCGTCCTGCGGATAGAACGAGTACAGAACCAGCTGCTGT
GGATGGAGTACTGCGTACAGAAAGGAAGTACAAGCAGCAGCAGTCCAACA
CGAGTGGAGGAGACAGATCTGTGGCACGGTACCTCAACTGAAGCCTGTCA
GATGATCACCCTTCATGGGTTCAACAGTCACGTCACTGAAAACTATGCTG
GAGGGTCGCAGAAAGTGACTACCTTTGCCCGGAATGCGGTATATGCCACA
AAGAACCTCTGCACCCCAGACTACTGTGGACGTAAGAAGATCATTCTTGC
AAAGGTTCTCTCATTTCAAACAACGTCCAACAGTAGGATAGAAACAGCTT
TTCAGGCAAAAGCCGTGAAGTGCTTCTGTGTGGAGGACAACAGGCCGTTT
GTTGTAGACTTCTCTGCCATGACGTTGACTGTGCAAACGTCTACAGCTGT
TGGCAAGGTCCGTAGAGAAGACTTGGCTATCTATTCAGACACCGTGTTGC
CCGGTAAATGGGACCCTCAGCCGATGGACCCTAGGACGGGGAAGCCTAAG
CTGTGCCATTTTGTGACGCTGGACCCCCTCTCAACAGAATTCTTCACGGT
CCAAGACAAGTTGTTCTCCAGCCTGGGGGACATGAGGGCGATCGTCCTGC
GGATAGAACGAGTACAGAACCAGCTGCTGTGGATGGAGTACTGCGTACAG
AAAGGAAGTACAAGCAGCAGCAGTCCAACACGAGTGGAGGAGACAGATCT
GTGGCACGGTACCTCAACTGAAGCCTGTCAGATGATCACCCTTCATGGGT
TCAACAGTCACGTCACTGAAAACTATGCTGGAGGGTCGCAGAAAGTGACT
ACCTTTGCCCGGAATGCGGTATATGCCACAAAGAACCTCTGCACCCCAGA
CTACTGTGGACGTAAGAAGATCATTCTTGCAAAGGTTCTCTCATTTCAAA
CAACGTCCAACAGTAGGATAGAAACAGCTTTTCAGGCAAAAGCCGTGAAG
TGCTTCTGTGTGGAGGACAACAGGCCGTTTGTTGTAGACTTCTCTGCCAT
GACGTTGACTGTGCAAACGTCTACAGCTGTTGGCAAGGTCCGTAGAGAAG
ACTTGGCTATCTATTCAGACACCGTGTTGCCCGGTAAATGGGACCCTCAG
CCGATGGACCCTAGGACGGGGAAGCCTAAGCTGTGCCATTTTGTGACGCT
GGACCCCCTCTCAACAGAATTCTTCACGGTCCAAGACAAGTTGTTCTCCA
GCCTGGGGGACATGAGGGCGATCGTCCTGCGGATAGAACGAGTACAGAAC
CAGCTGCTGTGGATGGAGTACTGCGTACAGAAAGGAAGTACAAGCAGCAG
CAGTCCAACACGAGTGGAGGAGACAGATCTGTGGCACGGTACCTCAACTG
AAGCCTGTCAGATGATCACCCTTCATGGGTTCAACAGTCACGTCACTGAA
AACTATGCTGGAGGGTCGCAGAAAGTGACTACCTTTGCCCGGAATGCGGT
ATATGCCACAAAGAACCTCTGCACCCCAGACTACTGTGGACGTAAGAAGA
TCATTCTTGCAAAGGTTCTC
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000149 | genome | Sc0000149:659264..660550 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL97295_cuf3 |
| Biotype | protein_coding |
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