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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL97294_cuf2 >transcript:BL97294_cuf2-protein ID=transcript:BL97294_cuf2-protein|Name=transcript:BL97294_cuf2|organism=Branchiostoma lanceolatum|type=polypeptide|length=345bp
SCTSQPGQSELHIRDVIVQVQMGDITMEQVGAIVNPSQNNLDLDKGVSRA
ISMAAGPSVQKECRQYIRDNWSPKAGEVIATGAGHLPCKAILHLVQPTAK
YLRSDVKNCLLVAHQMNLRSIAFPAMGTGGFHIKPERSARCLIDGIVEFV
EDWSPTTLSIIRIVILQESMLQAFHTAVHRKASEDTGKAAPSKDTNRLDR
LKNIATDKMKRIARRPKEETSWVTVQLPKPEPPKEDDFEDALQPDEVLLH
IFCLDQTKLQNARDTVDEFLHQYTTVVVINDDKETGIAQLVKEEVRWLRF
LGREENVSIAIEQENCIRIEGSRNVAAIAARFRLILKTIVEKHSR Run BLAST on NCBI mRNA from alignment at Sc0000149:656930..659007+ Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL97294_cuf2 ID=transcript:BL97294_cuf2|Name=transcript:BL97294_cuf2|organism=Branchiostoma lanceolatum|type=mRNA|length=2078bp|location=Sequence derived from alignment at Sc0000149:656930..659007+ (Branchiostoma lanceolatum)
TCTTGTACATCTCAGCCCGGCCAGAGTGAACTTCACATACGTGACGTCAT
AGTTCAAGTTCAGATGGGAGACATTACCATGGAGCAAGTCGGTGCCATCG
TCAATCCATCACAGAATAATCTTGGTAGGTCCTTTTAAATCATACAAAGA
ATTACAAGATCATTTTTCTTGCATTTTTATGAGTTCGTATCAGGAAAGAC
TTGGAATACGTACGTTGTTAGACACTGTGCCATTATTCCGTTTTTACGGA
ACCGTCAAATGGAAATCGAGGCTTTTGTTTCAACCTTCCCTGGCCTACTC
CACACCTTGATAGATAATAAGCCTACTACTATGCCTTCTAACAGACTTGG
ACAAAGGTGTAAGCAGAGCCATATCGATGGCAGCCGGCCCTAGCGTCCAG
AAGGAGTGTAGACAGTACATCCGGGACAACTGGTCTCCCAAGGCAGGAGA
GGTTATTGCAACAGGTGCGTACTGTATGTTGCATAGTCACTCACGGTTTT
GTCTTGTCATCGTCTTTGAGCATTTTTCAGTGCGCTCCTTTCAAATTGTT
CAAATACAATTTTTATTTCTTGATTATTCCATAGGTGCTGGTCACCTGCC
GTGCAAAGCGATTCTCCATCTCGTGCAACCAACAGCCAAATATCTGCGGT
CGGACGTGAAGAACTGCCTGCTGGTCGCGCACCAGATGAACCTGCGATCG
ATCGCTTTCCCTGCGATGGGAACAGGTGACTAATGTCTTCTTGGATGAAA
AGAAAATAAGAAAACTTAGGTTCAATATGTTAAGTAGCGTAGTTAACTCC
GTCCAACGTATGGAGCAGTTGTTTGGATTGAATAGGTAAAGTCTATGAGT
TGTAAATCTCAAAACACATTGCCTTCATCTGTCTCTTATACAGGAGGGTT
TCACATCAAGCCTGAGCGGTCGGCGAGGTGCCTGATTGACGGCATCGTGG
AGTTCGTGGAGGACTGGAGCCCCACCACACTGTCCATCATCAGGATTGTC
ATCCTCCAGGAGAGCATGTTACAGGCGTTCCACACGGCCGTCCACAGGAA
GGCTTCGGAGGACACAGGGAAAGCGGCTCCATCGAAAGACACAAACCGCC
TGGATAGGCTAAAAAGTAGGTATCAATTATATACTGTGCTGCGTTATACA
TGATGAGATTCAATGGGGTATGAATATTTTGCTGAGGTATTGTTATTGAT
TGTATCACAAAACGTGGCAACTATGCGAATATTTGCGTGGTTACTTCAAA
GTTGTAATGTCCTCATCTTTAACGATGGACGGATTTTCTTACCTTTATGT
CTACATAAAGTGTTCGGGTAGCAACCTAACTTAACCTGAAATGAGATTAC
GAATTCCAACATTTCTTCCACAAGACATAGCCACCGACAAGATGAAGCGT
ATAGCAAGGCGCCCAAAAGAGGAAACATCCTGGGTCACGGTCCAACTCCC
CAAACCAGAACCGCCCAAAGAAGATGACTTCGAAGACGCTCTGCAGCCCG
ACGAAGTTCTGCTGCACATCTTCTGCCTTGATCAGACAAAGTTACAGAAT
GCCCGAGACACTGTGGACGAATTTCTCCACCAGTACACAACTGTGGTGGT
GATCAACGACGACAAGGAGACAGGGATCGCCCAACTCGTGAAGGAGGAGG
TTAGATGGCTTCGGTTTTTGGGACGTGAGGAAAATGTGTCCATCGCAATC
GGTGAGTTTTTAAAAGAACTGATGTTTATCCTCAAACCATCATTTGTTGC
TTACGCTGATAAAATCTTATTCTGTCAATGATACTCAGTTAGACTCGATT
ATTGATCTGTGAAGAAATATAAGGGTTTATAGTAGTCGATTATAAGATAT
CTGTCTCTTGCTTATGGCAGCATCTCTTTACCTATTTGACTTTCCTTAAC
ATTGCGAAGGGCGATAGGTGAAATCACAACAGTATTTATGAGTTATTATC
TATGTCGACAATTATGATGTATTCAGAGCAGGAAAACTGCATCCGTATCG
AGGGAAGTCGGAACGTGGCGGCCATTGCAGCTAGATTCCGTCTGATACTG
AAGACAATCGTGGAGAAACATAGTCGGT Coding sequence (CDS) from alignment at Sc0000149:656930..659007+ >transcript:BL97294_cuf2 ID=transcript:BL97294_cuf2|Name=transcript:BL97294_cuf2|organism=Branchiostoma lanceolatum|type=CDS|length=6210bp|location=Sequence derived from alignment at Sc0000149:656930..659007+ (Branchiostoma lanceolatum)
TCTTGTACATCTCAGCCCGGCCAGAGTGAACTTCACATACGTGACGTCAT
AGTTCAAGTTCAGATGGGAGACATTACCATGGAGCAAGTCGGTGCCATCG
TCAATCCATCACAGAATAATCTTGACTTGGACAAAGGTGTAAGCAGAGCC
ATATCGATGGCAGCCGGCCCTAGCGTCCAGAAGGAGTGTAGACAGTACAT
CCGGGACAACTGGTCTCCCAAGGCAGGAGAGGTTATTGCAACAGGTGCTG
GTCACCTGCCGTGCAAAGCGATTCTCCATCTCGTGCAACCAACAGCCAAA
TATCTGCGGTCGGACGTGAAGAACTGCCTGCTGGTCGCGCACCAGATGAA
CCTGCGATCGATCGCTTTCCCTGCGATGGGAACAGGAGGGTTTCACATCA
AGCCTGAGCGGTCGGCGAGGTGCCTGATTGACGGCATCGTGGAGTTCGTG
GAGGACTGGAGCCCCACCACACTGTCCATCATCAGGATTGTCATCCTCCA
GGAGAGCATGTTACAGGCGTTCCACACGGCCGTCCACAGGAAGGCTTCGG
AGGACACAGGGAAAGCGGCTCCATCGAAAGACACAAACCGCCTGGATAGG
CTAAAAAACATAGCCACCGACAAGATGAAGCGTATAGCAAGGCGCCCAAA
AGAGGAAACATCCTGGGTCACGGTCCAACTCCCCAAACCAGAACCGCCCA
AAGAAGATGACTTCGAAGACGCTCTGCAGCCCGACGAAGTTCTGCTGCAC
ATCTTCTGCCTTGATCAGACAAAGTTACAGAATGCCCGAGACACTGTGGA
CGAATTTCTCCACCAGTACACAACTGTGGTGGTGATCAACGACGACAAGG
AGACAGGGATCGCCCAACTCGTGAAGGAGGAGGTTAGATGGCTTCGGTTT
TTGGGACGTGAGGAAAATGTGTCCATCGCAATCGAGCAGGAAAACTGCAT
CCGTATCGAGGGAAGTCGGAACGTGGCGGCCATTGCAGCTAGATTCCGTC
TGATACTGAAGACAATCGTGGAGAAACATAGTCGGTCTTGTACATCTCAG
CCCGGCCAGAGTGAACTTCACATACGTGACGTCATAGTTCAAGTTCAGAT
GGGAGACATTACCATGGAGCAAGTCGGTGCCATCGTCAATCCATCACAGA
ATAATCTTGACTTGGACAAAGGTGTAAGCAGAGCCATATCGATGGCAGCC
GGCCCTAGCGTCCAGAAGGAGTGTAGACAGTACATCCGGGACAACTGGTC
TCCCAAGGCAGGAGAGGTTATTGCAACAGGTGCTGGTCACCTGCCGTGCA
AAGCGATTCTCCATCTCGTGCAACCAACAGCCAAATATCTGCGGTCGGAC
GTGAAGAACTGCCTGCTGGTCGCGCACCAGATGAACCTGCGATCGATCGC
TTTCCCTGCGATGGGAACAGGAGGGTTTCACATCAAGCCTGAGCGGTCGG
CGAGGTGCCTGATTGACGGCATCGTGGAGTTCGTGGAGGACTGGAGCCCC
ACCACACTGTCCATCATCAGGATTGTCATCCTCCAGGAGAGCATGTTACA
GGCGTTCCACACGGCCGTCCACAGGAAGGCTTCGGAGGACACAGGGAAAG
CGGCTCCATCGAAAGACACAAACCGCCTGGATAGGCTAAAAAACATAGCC
ACCGACAAGATGAAGCGTATAGCAAGGCGCCCAAAAGAGGAAACATCCTG
GGTCACGGTCCAACTCCCCAAACCAGAACCGCCCAAAGAAGATGACTTCG
AAGACGCTCTGCAGCCCGACGAAGTTCTGCTGCACATCTTCTGCCTTGAT
CAGACAAAGTTACAGAATGCCCGAGACACTGTGGACGAATTTCTCCACCA
GTACACAACTGTGGTGGTGATCAACGACGACAAGGAGACAGGGATCGCCC
AACTCGTGAAGGAGGAGGTTAGATGGCTTCGGTTTTTGGGACGTGAGGAA
AATGTGTCCATCGCAATCGAGCAGGAAAACTGCATCCGTATCGAGGGAAG
TCGGAACGTGGCGGCCATTGCAGCTAGATTCCGTCTGATACTGAAGACAA
TCGTGGAGAAACATAGTCGGTCTTGTACATCTCAGCCCGGCCAGAGTGAA
CTTCACATACGTGACGTCATAGTTCAAGTTCAGATGGGAGACATTACCAT
GGAGCAAGTCGGTGCCATCGTCAATCCATCACAGAATAATCTTGACTTGG
ACAAAGGTGTAAGCAGAGCCATATCGATGGCAGCCGGCCCTAGCGTCCAG
AAGGAGTGTAGACAGTACATCCGGGACAACTGGTCTCCCAAGGCAGGAGA
GGTTATTGCAACAGGTGCTGGTCACCTGCCGTGCAAAGCGATTCTCCATC
TCGTGCAACCAACAGCCAAATATCTGCGGTCGGACGTGAAGAACTGCCTG
CTGGTCGCGCACCAGATGAACCTGCGATCGATCGCTTTCCCTGCGATGGG
AACAGGAGGGTTTCACATCAAGCCTGAGCGGTCGGCGAGGTGCCTGATTG
ACGGCATCGTGGAGTTCGTGGAGGACTGGAGCCCCACCACACTGTCCATC
ATCAGGATTGTCATCCTCCAGGAGAGCATGTTACAGGCGTTCCACACGGC
CGTCCACAGGAAGGCTTCGGAGGACACAGGGAAAGCGGCTCCATCGAAAG
ACACAAACCGCCTGGATAGGCTAAAAAACATAGCCACCGACAAGATGAAG
CGTATAGCAAGGCGCCCAAAAGAGGAAACATCCTGGGTCACGGTCCAACT
CCCCAAACCAGAACCGCCCAAAGAAGATGACTTCGAAGACGCTCTGCAGC
CCGACGAAGTTCTGCTGCACATCTTCTGCCTTGATCAGACAAAGTTACAG
AATGCCCGAGACACTGTGGACGAATTTCTCCACCAGTACACAACTGTGGT
GGTGATCAACGACGACAAGGAGACAGGGATCGCCCAACTCGTGAAGGAGG
AGGTTAGATGGCTTCGGTTTTTGGGACGTGAGGAAAATGTGTCCATCGCA
ATCGAGCAGGAAAACTGCATCCGTATCGAGGGAAGTCGGAACGTGGCGGC
CATTGCAGCTAGATTCCGTCTGATACTGAAGACAATCGTGGAGAAACATA
GTCGGTCTTGTACATCTCAGCCCGGCCAGAGTGAACTTCACATACGTGAC
GTCATAGTTCAAGTTCAGATGGGAGACATTACCATGGAGCAAGTCGGTGC
CATCGTCAATCCATCACAGAATAATCTTGACTTGGACAAAGGTGTAAGCA
GAGCCATATCGATGGCAGCCGGCCCTAGCGTCCAGAAGGAGTGTAGACAG
TACATCCGGGACAACTGGTCTCCCAAGGCAGGAGAGGTTATTGCAACAGG
TGCTGGTCACCTGCCGTGCAAAGCGATTCTCCATCTCGTGCAACCAACAG
CCAAATATCTGCGGTCGGACGTGAAGAACTGCCTGCTGGTCGCGCACCAG
ATGAACCTGCGATCGATCGCTTTCCCTGCGATGGGAACAGGAGGGTTTCA
CATCAAGCCTGAGCGGTCGGCGAGGTGCCTGATTGACGGCATCGTGGAGT
TCGTGGAGGACTGGAGCCCCACCACACTGTCCATCATCAGGATTGTCATC
CTCCAGGAGAGCATGTTACAGGCGTTCCACACGGCCGTCCACAGGAAGGC
TTCGGAGGACACAGGGAAAGCGGCTCCATCGAAAGACACAAACCGCCTGG
ATAGGCTAAAAAACATAGCCACCGACAAGATGAAGCGTATAGCAAGGCGC
CCAAAAGAGGAAACATCCTGGGTCACGGTCCAACTCCCCAAACCAGAACC
GCCCAAAGAAGATGACTTCGAAGACGCTCTGCAGCCCGACGAAGTTCTGC
TGCACATCTTCTGCCTTGATCAGACAAAGTTACAGAATGCCCGAGACACT
GTGGACGAATTTCTCCACCAGTACACAACTGTGGTGGTGATCAACGACGA
CAAGGAGACAGGGATCGCCCAACTCGTGAAGGAGGAGGTTAGATGGCTTC
GGTTTTTGGGACGTGAGGAAAATGTGTCCATCGCAATCGAGCAGGAAAAC
TGCATCCGTATCGAGGGAAGTCGGAACGTGGCGGCCATTGCAGCTAGATT
CCGTCTGATACTGAAGACAATCGTGGAGAAACATAGTCGGTCTTGTACAT
CTCAGCCCGGCCAGAGTGAACTTCACATACGTGACGTCATAGTTCAAGTT
CAGATGGGAGACATTACCATGGAGCAAGTCGGTGCCATCGTCAATCCATC
ACAGAATAATCTTGACTTGGACAAAGGTGTAAGCAGAGCCATATCGATGG
CAGCCGGCCCTAGCGTCCAGAAGGAGTGTAGACAGTACATCCGGGACAAC
TGGTCTCCCAAGGCAGGAGAGGTTATTGCAACAGGTGCTGGTCACCTGCC
GTGCAAAGCGATTCTCCATCTCGTGCAACCAACAGCCAAATATCTGCGGT
CGGACGTGAAGAACTGCCTGCTGGTCGCGCACCAGATGAACCTGCGATCG
ATCGCTTTCCCTGCGATGGGAACAGGAGGGTTTCACATCAAGCCTGAGCG
GTCGGCGAGGTGCCTGATTGACGGCATCGTGGAGTTCGTGGAGGACTGGA
GCCCCACCACACTGTCCATCATCAGGATTGTCATCCTCCAGGAGAGCATG
TTACAGGCGTTCCACACGGCCGTCCACAGGAAGGCTTCGGAGGACACAGG
GAAAGCGGCTCCATCGAAAGACACAAACCGCCTGGATAGGCTAAAAAACA
TAGCCACCGACAAGATGAAGCGTATAGCAAGGCGCCCAAAAGAGGAAACA
TCCTGGGTCACGGTCCAACTCCCCAAACCAGAACCGCCCAAAGAAGATGA
CTTCGAAGACGCTCTGCAGCCCGACGAAGTTCTGCTGCACATCTTCTGCC
TTGATCAGACAAAGTTACAGAATGCCCGAGACACTGTGGACGAATTTCTC
CACCAGTACACAACTGTGGTGGTGATCAACGACGACAAGGAGACAGGGAT
CGCCCAACTCGTGAAGGAGGAGGTTAGATGGCTTCGGTTTTTGGGACGTG
AGGAAAATGTGTCCATCGCAATCGAGCAGGAAAACTGCATCCGTATCGAG
GGAAGTCGGAACGTGGCGGCCATTGCAGCTAGATTCCGTCTGATACTGAA
GACAATCGTGGAGAAACATAGTCGGTCTTGTACATCTCAGCCCGGCCAGA
GTGAACTTCACATACGTGACGTCATAGTTCAAGTTCAGATGGGAGACATT
ACCATGGAGCAAGTCGGTGCCATCGTCAATCCATCACAGAATAATCTTGA
CTTGGACAAAGGTGTAAGCAGAGCCATATCGATGGCAGCCGGCCCTAGCG
TCCAGAAGGAGTGTAGACAGTACATCCGGGACAACTGGTCTCCCAAGGCA
GGAGAGGTTATTGCAACAGGTGCTGGTCACCTGCCGTGCAAAGCGATTCT
CCATCTCGTGCAACCAACAGCCAAATATCTGCGGTCGGACGTGAAGAACT
GCCTGCTGGTCGCGCACCAGATGAACCTGCGATCGATCGCTTTCCCTGCG
ATGGGAACAGGAGGGTTTCACATCAAGCCTGAGCGGTCGGCGAGGTGCCT
GATTGACGGCATCGTGGAGTTCGTGGAGGACTGGAGCCCCACCACACTGT
CCATCATCAGGATTGTCATCCTCCAGGAGAGCATGTTACAGGCGTTCCAC
ACGGCCGTCCACAGGAAGGCTTCGGAGGACACAGGGAAAGCGGCTCCATC
GAAAGACACAAACCGCCTGGATAGGCTAAAAAACATAGCCACCGACAAGA
TGAAGCGTATAGCAAGGCGCCCAAAAGAGGAAACATCCTGGGTCACGGTC
CAACTCCCCAAACCAGAACCGCCCAAAGAAGATGACTTCGAAGACGCTCT
GCAGCCCGACGAAGTTCTGCTGCACATCTTCTGCCTTGATCAGACAAAGT
TACAGAATGCCCGAGACACTGTGGACGAATTTCTCCACCAGTACACAACT
GTGGTGGTGATCAACGACGACAAGGAGACAGGGATCGCCCAACTCGTGAA
GGAGGAGGTTAGATGGCTTCGGTTTTTGGGACGTGAGGAAAATGTGTCCA
TCGCAATCGAGCAGGAAAACTGCATCCGTATCGAGGGAAGTCGGAACGTG
GCGGCCATTGCAGCTAGATTCCGTCTGATACTGAAGACAATCGTGGAGAA
ACATAGTCGG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| Sc0000149 | genome | Sc0000149:656930..659007 + |
Properties
| Property Name | Value |
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| Transcript id | BL97294_cuf2 |
| Biotype | protein_coding |
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