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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL97290_cuf1 >transcript:BL97290_cuf1-protein ID=transcript:BL97290_cuf1-protein|Name=transcript:BL97290_cuf1|organism=Branchiostoma lanceolatum|type=polypeptide|length=206bp
PTCVEMRCPTLSFPPNGQMIGGVVIGDLLRFTCNLGYNLVGNNTLLCRND KTWNGTRPNCEKVVCPPPDVPSNCDVNGGRTYGDTVTYTCDVGYRLDGTG TRVCLATGVWGDTAPRCERKTCTILFPPLHGSVSGGHHYGDMMTYACDTG YDLIGSPSRICQENQQWTSSQPICKLVQCTRLNAPTQGTMNGGNNYNNTV FFTCAE Run BLAST on NCBI mRNA from alignment at Sc0000250:283963..286096- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL97290_cuf1 ID=transcript:BL97290_cuf1|Name=transcript:BL97290_cuf1|organism=Branchiostoma lanceolatum|type=mRNA|length=2134bp|location=Sequence derived from alignment at Sc0000250:283963..286096- (Branchiostoma lanceolatum) CCGACATGTGTGGGTGAGTACTTTTGAAATGTTGTTGCAATAAACCATTT
CGAACTTCCAAGTGACCATGTGTAGTGATTCATTGTGGTCAAGGTCACTG
TCTTGTAACAAACCCATGATACTTGTCTTGATGTTTTGCAACATTTCTGT
TGCTTCTGGAGCCAGCTTAACAAGCTGAAAAGTCCATTGCACAAAAATAA
CACAGCAGAATACGACACAATACAGCCACGGCCGATGTTTCTCTACTCCT
AAATCTCTGCTTCTGACATCATATATAATTAGCTACAATCAGATGCAGCG
CCAAAACTGCCGGGTAGTTCATTGCTTGATCGTTATGGGAATGCCTTGGG
TACATGTTTCGTACATTTAAAGTAATTTCTATGTTCTTACATATTGATTG
GCTAACATAACTTAGTATACATAATAATGAATGAAAAAAGATAAAAAGAG
AACATTTAGCTCCAGGTGAGAATTAAATTATCACTTTTGGAATTCCTGCT
AAAATTTCAATTTTGCAATGTCTCCTCCTCATCCACGTATATGCGTGTCA
ATTTTCCCCATTTTATGTTAACAGAAATGCGATGTCCTACCTTGTCCTTC
CCACCCAATGGACAAATGATCGGTGGAGTGGTAATTGGAGACCTTCTTCG
GTTTACCTGCAATTTGGGGTATAACCTTGTCGGAAACAATACCCTTCTTT
GTCGGAACGACAAGACATGGAACGGAACCCGACCAAACTGTGAAAGTATG
TACCTCGTTCTATACTACTCAACATATTGGGTATCAACTTAGCATATTCA
AGAGACCATAACCCGATACCATTTTTACATCACTCTTAATGGGTTGTGTT
TATTTCGTTTTGGATTTTTCTATTGATAGAGGTGGTCTGCCCACCCCCTG
ATGTGCCTTCTAACTGTGACGTCAATGGCGGAAGGACCTATGGAGACACG
GTGACGTACACCTGTGACGTCGGCTACAGACTCGACGGTACCGGTACTAG
GGTTTGTCTCGCAACGGGTGTATGGGGCGACACTGCGCCACGGTGTGAAA
GTACGTGTTTTACCTTGGAATGAATACAAGTTTATATTATCCATGTTGGG
ATATAGCAGTAAGGTCCTGAGTTATTCTATTGAAGTACAGCAGGCAGCTT
GCAAATTTTTTGAATGCAGTATTTTGTTTTTGACCCTAATCATTTTCAAG
AATACCTTTCCACAAGTATGCTATGATCTCTTTTTCCAGATATGACACAT
GCTACCAGTTTCAGCGTTGTTATGATTGGTAATAGTAGCGGTCCTTAGTG
CACTATGTTCTGCTGCTGCTGTGATCTGAACATTATGCAACTGAAATCAG
TCCTTCTTAAGTTCTCTCCACTGCATCGCGAGCTTCATTAGCTCCCGTAG
TTTCTTTGTAATATTTATCTTCTATTCTTTACAAAAAACAATTGAAGATA
AAAATCTTGTATTGTTTTTGGTTACTAAAGATGTCTATGTTTCCCTGACA
GGAAAGACGTGTACAATACTATTCCCTCCGTTACACGGGTCCGTGTCAGG
AGGACATCACTATGGAGACATGATGACATATGCATGTGACACCGGTTACG
ACCTGATCGGAAGTCCGAGTAGAATCTGTCAGGAGAACCAGCAATGGACC
AGCTCCCAGCCAATTTGTAAATGTATGGCATTTTTTTTGTTTTGTTTATA
GTTTTATGTTACTACGATGTATATTGATGATACTTCAATCTGTTATTAAT
CATCAAAGTTCATGATCAATCGTTCGATTTAAGTCTGTTTACACATGATA
TCAACTGGCCACAAATTGGTGAACTCAAATAGATCCAACAAATATGACAC
AATTCCCTAATGCAATCGAAAGATAAGTACCAAACAAACCTGTCTAAATA
AGTAAAAAAAGATCGATGGTGGTCTTTCATTGCATATTAGATAATAGTAG
ACTATTTCAAAATAGGAATGGGCTAGTAAAGTTTACCAAAATATGTATCA
TGGATGTCTGTAGCGGATTTTTATTTTGCTTGTTTGTATCAGTGGTCCAG
TGTACCCGGTTGAACGCACCTACCCAAGGCACCATGAACGGTGGTAACAA
CTACAACAATACCGTGTTCTTCACCTGTGCAGAG Coding sequence (CDS) from alignment at Sc0000250:283963..286096- >transcript:BL97290_cuf1 ID=transcript:BL97290_cuf1|Name=transcript:BL97290_cuf1|organism=Branchiostoma lanceolatum|type=CDS|length=3090bp|location=Sequence derived from alignment at Sc0000250:283963..286096- (Branchiostoma lanceolatum) CCGACATGTGTGGAAATGCGATGTCCTACCTTGTCCTTCCCACCCAATGG ACAAATGATCGGTGGAGTGGTAATTGGAGACCTTCTTCGGTTTACCTGCA ATTTGGGGTATAACCTTGTCGGAAACAATACCCTTCTTTGTCGGAACGAC AAGACATGGAACGGAACCCGACCAAACTGTGAAAAGGTGGTCTGCCCACC CCCTGATGTGCCTTCTAACTGTGACGTCAATGGCGGAAGGACCTATGGAG ACACGGTGACGTACACCTGTGACGTCGGCTACAGACTCGACGGTACCGGT ACTAGGGTTTGTCTCGCAACGGGTGTATGGGGCGACACTGCGCCACGGTG TGAAAGAAAGACGTGTACAATACTATTCCCTCCGTTACACGGGTCCGTGT CAGGAGGACATCACTATGGAGACATGATGACATATGCATGTGACACCGGT TACGACCTGATCGGAAGTCCGAGTAGAATCTGTCAGGAGAACCAGCAATG GACCAGCTCCCAGCCAATTTGTAAATTGGTCCAGTGTACCCGGTTGAACG CACCTACCCAAGGCACCATGAACGGTGGTAACAACTACAACAATACCGTG TTCTTCACCTGTGCAGAGCCGACATGTGTGGAAATGCGATGTCCTACCTT GTCCTTCCCACCCAATGGACAAATGATCGGTGGAGTGGTAATTGGAGACC TTCTTCGGTTTACCTGCAATTTGGGGTATAACCTTGTCGGAAACAATACC CTTCTTTGTCGGAACGACAAGACATGGAACGGAACCCGACCAAACTGTGA AAAGGTGGTCTGCCCACCCCCTGATGTGCCTTCTAACTGTGACGTCAATG GCGGAAGGACCTATGGAGACACGGTGACGTACACCTGTGACGTCGGCTAC AGACTCGACGGTACCGGTACTAGGGTTTGTCTCGCAACGGGTGTATGGGG CGACACTGCGCCACGGTGTGAAAGAAAGACGTGTACAATACTATTCCCTC CGTTACACGGGTCCGTGTCAGGAGGACATCACTATGGAGACATGATGACA TATGCATGTGACACCGGTTACGACCTGATCGGAAGTCCGAGTAGAATCTG TCAGGAGAACCAGCAATGGACCAGCTCCCAGCCAATTTGTAAATTGGTCC AGTGTACCCGGTTGAACGCACCTACCCAAGGCACCATGAACGGTGGTAAC AACTACAACAATACCGTGTTCTTCACCTGTGCAGAGCCGACATGTGTGGA AATGCGATGTCCTACCTTGTCCTTCCCACCCAATGGACAAATGATCGGTG GAGTGGTAATTGGAGACCTTCTTCGGTTTACCTGCAATTTGGGGTATAAC CTTGTCGGAAACAATACCCTTCTTTGTCGGAACGACAAGACATGGAACGG AACCCGACCAAACTGTGAAAAGGTGGTCTGCCCACCCCCTGATGTGCCTT CTAACTGTGACGTCAATGGCGGAAGGACCTATGGAGACACGGTGACGTAC ACCTGTGACGTCGGCTACAGACTCGACGGTACCGGTACTAGGGTTTGTCT CGCAACGGGTGTATGGGGCGACACTGCGCCACGGTGTGAAAGAAAGACGT GTACAATACTATTCCCTCCGTTACACGGGTCCGTGTCAGGAGGACATCAC TATGGAGACATGATGACATATGCATGTGACACCGGTTACGACCTGATCGG AAGTCCGAGTAGAATCTGTCAGGAGAACCAGCAATGGACCAGCTCCCAGC CAATTTGTAAATTGGTCCAGTGTACCCGGTTGAACGCACCTACCCAAGGC ACCATGAACGGTGGTAACAACTACAACAATACCGTGTTCTTCACCTGTGC AGAGCCGACATGTGTGGAAATGCGATGTCCTACCTTGTCCTTCCCACCCA ATGGACAAATGATCGGTGGAGTGGTAATTGGAGACCTTCTTCGGTTTACC TGCAATTTGGGGTATAACCTTGTCGGAAACAATACCCTTCTTTGTCGGAA CGACAAGACATGGAACGGAACCCGACCAAACTGTGAAAAGGTGGTCTGCC CACCCCCTGATGTGCCTTCTAACTGTGACGTCAATGGCGGAAGGACCTAT GGAGACACGGTGACGTACACCTGTGACGTCGGCTACAGACTCGACGGTAC CGGTACTAGGGTTTGTCTCGCAACGGGTGTATGGGGCGACACTGCGCCAC GGTGTGAAAGAAAGACGTGTACAATACTATTCCCTCCGTTACACGGGTCC GTGTCAGGAGGACATCACTATGGAGACATGATGACATATGCATGTGACAC CGGTTACGACCTGATCGGAAGTCCGAGTAGAATCTGTCAGGAGAACCAGC AATGGACCAGCTCCCAGCCAATTTGTAAATTGGTCCAGTGTACCCGGTTG AACGCACCTACCCAAGGCACCATGAACGGTGGTAACAACTACAACAATAC CGTGTTCTTCACCTGTGCAGAGCCGACATGTGTGGAAATGCGATGTCCTA CCTTGTCCTTCCCACCCAATGGACAAATGATCGGTGGAGTGGTAATTGGA GACCTTCTTCGGTTTACCTGCAATTTGGGGTATAACCTTGTCGGAAACAA TACCCTTCTTTGTCGGAACGACAAGACATGGAACGGAACCCGACCAAACT GTGAAAAGGTGGTCTGCCCACCCCCTGATGTGCCTTCTAACTGTGACGTC AATGGCGGAAGGACCTATGGAGACACGGTGACGTACACCTGTGACGTCGG CTACAGACTCGACGGTACCGGTACTAGGGTTTGTCTCGCAACGGGTGTAT GGGGCGACACTGCGCCACGGTGTGAAAGAAAGACGTGTACAATACTATTC CCTCCGTTACACGGGTCCGTGTCAGGAGGACATCACTATGGAGACATGAT GACATATGCATGTGACACCGGTTACGACCTGATCGGAAGTCCGAGTAGAA TCTGTCAGGAGAACCAGCAATGGACCAGCTCCCAGCCAATTTGTAAATTG GTCCAGTGTACCCGGTTGAACGCACCTACCCAAGGCACCATGAACGGTGG TAACAACTACAACAATACCGTGTTCTTCACCTGTGCAGAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
Sc0000250 | genome | Sc0000250:283963..286096 - |
Properties
Property Name | Value |
Transcript id | BL97290_cuf1 |
Biotype | protein_coding |
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