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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL97255_cuf1 >transcript:BL97255_cuf1-protein ID=transcript:BL97255_cuf1-protein|Name=transcript:BL97255_cuf1|organism=Branchiostoma lanceolatum|type=polypeptide|length=136bp
MTIVVMPRRWIVLAILLCFLGNGFLSCEGCLTTKGKEFVLSFLETFNNEP
RLYITSDSQTSVTIEAPADGWSTTVDVSPHEKVIVTLPRSSVEMSGSQPD
NKAVYVTSDKDISILAVSGEPGLITGTYRALPITFL Run BLAST on NCBI mRNA from alignment at Sc0000002:5298762..5300947- Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL97255_cuf1 ID=transcript:BL97255_cuf1|Name=transcript:BL97255_cuf1|organism=Branchiostoma lanceolatum|type=mRNA|length=2186bp|location=Sequence derived from alignment at Sc0000002:5298762..5300947- (Branchiostoma lanceolatum)
GTCAAATGTCACAAAATGTGCAACATTCGCACGAATGAGACAACCGACAT
TGATGAAGAGCCTTTTCCGCCTGGTTTCTTCAGAGTCAGCCACACCCACA
ATATTCTCTAGCGTACTGTTGTGTGATACGGCCGGATAAGAAGAACAATG
TATAATGTTTAGTGCTTCGGTGCAGTTTTTTATGCGTGCTCAGGAGTAGA
AATGACCATAGTAGTCATGCCGAGGCGTTGGATCGTGTTGGCAATTTTGC
TCTGTTTCCTCGGAAACGGATTTCTTTCTTGCGAAGGTAGGTGTCAATAC
TCTTTATCATGAAACGCTTTCATTGTGTATTTGGACACTTAGCCTTTAGT
CATCTATCGGAAGGGGAGGGGTAAGATGTGTGGGGGAGAGAGATACAATC
TCTTAATATGACAGGTCAATATAGCATGTAAATTAAATGGCATGGGTGTC
GTGGGTGGGGGGATACCATTGCTGTCTGGGAGGAAAATCGTTCATCCTGT
AGATAAGTTGATACGACTACAATATCTGAGGACAAATCGCAATCGACGTA
CGATCGAAAACTCAGGGCTTTCTTGTGACGACGGTGATTCCAACTGTTTT
GTTAGGGGAAAGGCTTTCATTGCTCCTTGTAGTCTTTTGGTTCTGTCGCA
GCCTGCTTAAAAATATACGATATTGATAAAATGGTATGGCGGCTTACGGT
GAATGTGATCACATGGTAATAAAAAAGACAGAAACGGGCTACTCACACGC
AGGATTTCAGGTCGAAGGAAAACGTTTTCACAGTCAGACATTTGTGTCAA
CCTTGAATCCATCCTCGATACATACTTTGTCTGTTAATATAGAGTCCGTT
GAGCCTATAATTTTGCCTTCAACATTGATATGAAATGAGTCTATTCGACT
CAAAAAGGTACTTGTAGTAAAATCCAGCAAATAAAGATTAACATGGCACA
CCATATTATTGCTCATTCGTATGAAACTAACAGTAGTCACTATATTATTT
TTCCTACATACCATAACAAGATAGACATTTATCTCATTTGTTTAGGTCGG
AAATCATTTGAATTTTTCCCCCACATATTGTCTCGTGTTCATCATCGTTT
ACAAAACCAGAAATCTGAATTTGTCCGTTTATTTCTTCAAGGATGCCTGA
CCACGAAAGGCAAAGAGTTTGTGTTGTCCTTTCTGGAAACCTTCAATAAC
GAGCCACGGCTCTACATAACAAGCGACTCTCAGACATCAGTGACCATAGA
GGCCCCGGCGGATGGATGGAGCACAACCGTGGACGTGAGTCCACATGAGG
TAAGACCTCTGGTGATGTTACCTCCATTTAAGATGGAGGGGTCTTTTTGG
TGGGGCGGGGGGGGGTTGGGGTCTTGCTGTGTGTTTGTTTGTGTGTTTGT
GCTTCAGGATATTTGTGGTCAGCATACTTTAAGAGCCTCTGGATGGATTA
TGATGATATTTGGGATGTTGGTAGGTCTTGATAAGACAAGTCAAGGTAGA
TTGTTGGACTCCTGACGACTTTCTCTGGTACTGTAGCAGAGCTTATGGTT
TGTGTACCCTTTACTCTGGACATGCTTTGGTCTTGTTGAAGTTGAGTTGA
GTTGAGTGAGGTTGAGTTGGAAAAACAGTAAGCATCTTTCCTCATTTTTA
TAGCTTGATAAGTCATATTCTGCACCCTTTTCGAAGATTGCACATGACTG
CTGACCACTGATTAAGTACAACAGAAATATACAAACACGTAAAGCCCCAT
TTCCACTAAACGGCGACCGTTGTGTGCGGACCAAAACTGGATTTGTGTGA
TTCTTGCTTTTGTGATTGAAATATGAAATAAAAGACAACAAGACACACAA
AACTGTTCTTGGTCGCAGCCTCTAAGTAGAAAGGGATTACAACAGATCAG
CCATAAAGCAGAAAATCGCATAGACCTATTTTCAATGATACCATTCAGTA
TTGATGTATTACAGCAAAGGCTGTTATTGAAAATGTAACAAAGGAGGGTA
TGTCACTTTACCAACACAGAAAGTGATAGTCACGTTGCCTCGGAGCTCGG
TCGAGATGAGCGGCAGTCAACCCGACAACAAAGCTGTGTACGTCACTTCC
GACAAAGACATCAGCATCCTGGCTGTTTCCGGCGAACCGGGGCTCATCAC
AGGCACCTATAGGGCTTTGCCGATTACATTCCTCGG Coding sequence (CDS) from alignment at Sc0000002:5298762..5300947- >transcript:BL97255_cuf1 ID=transcript:BL97255_cuf1|Name=transcript:BL97255_cuf1|organism=Branchiostoma lanceolatum|type=CDS|length=1224bp|location=Sequence derived from alignment at Sc0000002:5298762..5300947- (Branchiostoma lanceolatum)
ATGACCATAGTAGTCATGCCGAGGCGTTGGATCGTGTTGGCAATTTTGCT
CTGTTTCCTCGGAAACGGATTTCTTTCTTGCGAAGGATGCCTGACCACGA
AAGGCAAAGAGTTTGTGTTGTCCTTTCTGGAAACCTTCAATAACGAGCCA
CGGCTCTACATAACAAGCGACTCTCAGACATCAGTGACCATAGAGGCCCC
GGCGGATGGATGGAGCACAACCGTGGACGTGAGTCCACATGAGAAAGTGA
TAGTCACGTTGCCTCGGAGCTCGGTCGAGATGAGCGGCAGTCAACCCGAC
AACAAAGCTGTGTACGTCACTTCCGACAAAGACATCAGCATCCTGGCTGT
TTCCGGCGAACCGGGGCTCATCACAGGCACCTATAGGGCTTTGCCGATTA
CATTCCTCATGACCATAGTAGTCATGCCGAGGCGTTGGATCGTGTTGGCA
ATTTTGCTCTGTTTCCTCGGAAACGGATTTCTTTCTTGCGAAGGATGCCT
GACCACGAAAGGCAAAGAGTTTGTGTTGTCCTTTCTGGAAACCTTCAATA
ACGAGCCACGGCTCTACATAACAAGCGACTCTCAGACATCAGTGACCATA
GAGGCCCCGGCGGATGGATGGAGCACAACCGTGGACGTGAGTCCACATGA
GAAAGTGATAGTCACGTTGCCTCGGAGCTCGGTCGAGATGAGCGGCAGTC
AACCCGACAACAAAGCTGTGTACGTCACTTCCGACAAAGACATCAGCATC
CTGGCTGTTTCCGGCGAACCGGGGCTCATCACAGGCACCTATAGGGCTTT
GCCGATTACATTCCTCATGACCATAGTAGTCATGCCGAGGCGTTGGATCG
TGTTGGCAATTTTGCTCTGTTTCCTCGGAAACGGATTTCTTTCTTGCGAA
GGATGCCTGACCACGAAAGGCAAAGAGTTTGTGTTGTCCTTTCTGGAAAC
CTTCAATAACGAGCCACGGCTCTACATAACAAGCGACTCTCAGACATCAG
TGACCATAGAGGCCCCGGCGGATGGATGGAGCACAACCGTGGACGTGAGT
CCACATGAGAAAGTGATAGTCACGTTGCCTCGGAGCTCGGTCGAGATGAG
CGGCAGTCAACCCGACAACAAAGCTGTGTACGTCACTTCCGACAAAGACA
TCAGCATCCTGGCTGTTTCCGGCGAACCGGGGCTCATCACAGGCACCTAT
AGGGCTTTGCCGATTACATTCCTC
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000002 | genome | Sc0000002:5298762..5300947 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL97255_cuf1 |
| Biotype | protein_coding |
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