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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL97217_cuf0 >transcript:BL97217_cuf0-protein ID=transcript:BL97217_cuf0-protein|Name=transcript:BL97217_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=194bp
EQLVASVAIDFTWQDSRLSWDPKYYDDITTLSVPGNRIWTPTLTLQRNAD
PGEKGLRNEVPVRVSSNGRVEWSVETLTTTVCNADPFYFPADTMECHICF
SAATAIKQTIQCQGGRSSADNRNSPCNSYSTAKTEGEWYRKDNIFANDNR
EACFTVHLARIPTFHIATTVGPCIILVVLMIITFVMPLDRGDRI Run BLAST on NCBI mRNA from alignment at Sc0000054:1415405..1416831- Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL97217_cuf0 ID=transcript:BL97217_cuf0|Name=transcript:BL97217_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=1427bp|location=Sequence derived from alignment at Sc0000054:1415405..1416831- (Branchiostoma lanceolatum)
GAGCAACTTGTCGCGTCTGTCGCTATCGATTTCGTAAGTTGCCACAGCTA
CAAAACTTTACTGACGCCATTTTGGCATTGAGACCTTAACAACCTTTTCC
ATTGTCATTGTCGGCTTGCACGGTAAAATGTCATTGTTTTTTGCTAGACG
TGGCAAGACAGCCGACTGAGTTGGGATCCGAAATACTACGATGACATCAC
TACACTCAGCGTTCCGGGCAACAGAATTTGGACTCCAACATTGACTTTAC
AGAGAAAGTACGTTGTTGCTTCTTCAATTTACCCACTTGACAGTAATAAA
ACAGTACACCAAATGTCTTTCCAAGAATGTTAGATATTGATTTACTCCAC
ATGATTGTAAATATGAATGTTAACGTCGTAACCTAGTATTTTACCGACTG
TATGTTTAATGTAATGATCATGTTTTCCCCAGGGTTTTCCCTTAGAAACT
AGCTTTCGCTAGTTGCGCAACCCTAGGATGTAAATACAATGTACATGCTG
AACCAATAAATAGCTAAATAAACTAAAACAATGGCCAAACATGATACAAT
TCTACGCTATCCCAGTACGGACTGTGCGAGCTGTACACTGCAAAATTATG
TAGTTACCCAAAAAATACAATTTTTGATACAGATTAAAAAAGAAAAATGC
CCGAATTTTTTTGGTTTGCTTCCCAGTGCTGATCCAGGTGAGAAAGGCCT
ACGTAATGAAGTACCGGTCCGAGTGAGCAGTAATGGCCGGGTGGAATGGA
GTGTAGAGACCCTGACTACCACCGTGTGCAATGCAGACCCGTTCTACTTT
CCTGCAGACACCATGGAATGCCATATCTGTTTTTCTGCAGCTACAGCAAT
CAAGCAAACCATTCGTAAGGCTTTTACGGATTATGCTTTGTGCCAATTTA
GTTTAATATCATTACTGTGTACAGCAATGTCCATAACATAACCATGATAC
AAAACCTTTCATAGGTGTGGCATTTGTGGAAAAGGAAAGATCATTGAATC
ATTGAACAAAAGGACACCAGATTTTGCAACTAGGGGTTGTTACTAACATA
GGATTAACTTTTGTCGTCATCAACCACAATTAGAAAATGGCTTGTTTTTA
TATCTGGTACATGTTATCCTGATGGCAACAAAACATATCAAGTGATAATT
TATTGGAACCATATGTTGAACATAGAATGCCAGGGAGGAAGGTCTTCAGC
AGACAACAGAAACAGTCCGTGTAACTCTTATTCTACTGCAAAAACGGAGG
GCGAGTGGTACAGAAAGGATAATATCTTCGCAAATGACAATAGGGAGGCG
TGCTTTACTGTTCACCTGGCGAGGATCCCCACGTTCCACATCGCCACGAC
CGTTGGACCCTGCATCATCCTGGTGGTGTTGATGATCATCACCTTCGTCA
TGCCACTGGACAGGGGAGACCGGATCT Coding sequence (CDS) from alignment at Sc0000054:1415405..1416831- >transcript:BL97217_cuf0 ID=transcript:BL97217_cuf0|Name=transcript:BL97217_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=2328bp|location=Sequence derived from alignment at Sc0000054:1415405..1416831- (Branchiostoma lanceolatum)
GAGCAACTTGTCGCGTCTGTCGCTATCGATTTCACGTGGCAAGACAGCCG
ACTGAGTTGGGATCCGAAATACTACGATGACATCACTACACTCAGCGTTC
CGGGCAACAGAATTTGGACTCCAACATTGACTTTACAGAGAAATGCTGAT
CCAGGTGAGAAAGGCCTACGTAATGAAGTACCGGTCCGAGTGAGCAGTAA
TGGCCGGGTGGAATGGAGTGTAGAGACCCTGACTACCACCGTGTGCAATG
CAGACCCGTTCTACTTTCCTGCAGACACCATGGAATGCCATATCTGTTTT
TCTGCAGCTACAGCAATCAAGCAAACCATTCAATGCCAGGGAGGAAGGTC
TTCAGCAGACAACAGAAACAGTCCGTGTAACTCTTATTCTACTGCAAAAA
CGGAGGGCGAGTGGTACAGAAAGGATAATATCTTCGCAAATGACAATAGG
GAGGCGTGCTTTACTGTTCACCTGGCGAGGATCCCCACGTTCCACATCGC
CACGACCGTTGGACCCTGCATCATCCTGGTGGTGTTGATGATCATCACCT
TCGTCATGCCACTGGACAGGGGAGACCGGATCGAGCAACTTGTCGCGTCT
GTCGCTATCGATTTCACGTGGCAAGACAGCCGACTGAGTTGGGATCCGAA
ATACTACGATGACATCACTACACTCAGCGTTCCGGGCAACAGAATTTGGA
CTCCAACATTGACTTTACAGAGAAATGCTGATCCAGGTGAGAAAGGCCTA
CGTAATGAAGTACCGGTCCGAGTGAGCAGTAATGGCCGGGTGGAATGGAG
TGTAGAGACCCTGACTACCACCGTGTGCAATGCAGACCCGTTCTACTTTC
CTGCAGACACCATGGAATGCCATATCTGTTTTTCTGCAGCTACAGCAATC
AAGCAAACCATTCAATGCCAGGGAGGAAGGTCTTCAGCAGACAACAGAAA
CAGTCCGTGTAACTCTTATTCTACTGCAAAAACGGAGGGCGAGTGGTACA
GAAAGGATAATATCTTCGCAAATGACAATAGGGAGGCGTGCTTTACTGTT
CACCTGGCGAGGATCCCCACGTTCCACATCGCCACGACCGTTGGACCCTG
CATCATCCTGGTGGTGTTGATGATCATCACCTTCGTCATGCCACTGGACA
GGGGAGACCGGATCGAGCAACTTGTCGCGTCTGTCGCTATCGATTTCACG
TGGCAAGACAGCCGACTGAGTTGGGATCCGAAATACTACGATGACATCAC
TACACTCAGCGTTCCGGGCAACAGAATTTGGACTCCAACATTGACTTTAC
AGAGAAATGCTGATCCAGGTGAGAAAGGCCTACGTAATGAAGTACCGGTC
CGAGTGAGCAGTAATGGCCGGGTGGAATGGAGTGTAGAGACCCTGACTAC
CACCGTGTGCAATGCAGACCCGTTCTACTTTCCTGCAGACACCATGGAAT
GCCATATCTGTTTTTCTGCAGCTACAGCAATCAAGCAAACCATTCAATGC
CAGGGAGGAAGGTCTTCAGCAGACAACAGAAACAGTCCGTGTAACTCTTA
TTCTACTGCAAAAACGGAGGGCGAGTGGTACAGAAAGGATAATATCTTCG
CAAATGACAATAGGGAGGCGTGCTTTACTGTTCACCTGGCGAGGATCCCC
ACGTTCCACATCGCCACGACCGTTGGACCCTGCATCATCCTGGTGGTGTT
GATGATCATCACCTTCGTCATGCCACTGGACAGGGGAGACCGGATCGAGC
AACTTGTCGCGTCTGTCGCTATCGATTTCACGTGGCAAGACAGCCGACTG
AGTTGGGATCCGAAATACTACGATGACATCACTACACTCAGCGTTCCGGG
CAACAGAATTTGGACTCCAACATTGACTTTACAGAGAAATGCTGATCCAG
GTGAGAAAGGCCTACGTAATGAAGTACCGGTCCGAGTGAGCAGTAATGGC
CGGGTGGAATGGAGTGTAGAGACCCTGACTACCACCGTGTGCAATGCAGA
CCCGTTCTACTTTCCTGCAGACACCATGGAATGCCATATCTGTTTTTCTG
CAGCTACAGCAATCAAGCAAACCATTCAATGCCAGGGAGGAAGGTCTTCA
GCAGACAACAGAAACAGTCCGTGTAACTCTTATTCTACTGCAAAAACGGA
GGGCGAGTGGTACAGAAAGGATAATATCTTCGCAAATGACAATAGGGAGG
CGTGCTTTACTGTTCACCTGGCGAGGATCCCCACGTTCCACATCGCCACG
ACCGTTGGACCCTGCATCATCCTGGTGGTGTTGATGATCATCACCTTCGT
CATGCCACTGGACAGGGGAGACCGGATC
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000054 | genome | Sc0000054:1415405..1416831 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL97217_cuf0 |
| Biotype | protein_coding |
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