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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL97205_cuf19 >transcript:BL97205_cuf19-protein ID=transcript:BL97205_cuf19-protein|Name=transcript:BL97205_cuf19|organism=Branchiostoma lanceolatum|type=polypeptide|length=137bp
MTSYHSRKNLQQIVDALNQAQEHFGSEGSGDFQMFDSSEFEGRDLMFRDN
VQRLVPVGQRNTWQKWLGSSYMESVGHLISHDEQRNQHVLDKQVRWCVTS
DAEREKCEELSRVQKEGVSFPTVKCVQADNADQCGQM Run BLAST on NCBI mRNA from alignment at Sc0000043:1263379..1270465- Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL97205_cuf19 ID=transcript:BL97205_cuf19|Name=transcript:BL97205_cuf19|organism=Branchiostoma lanceolatum|type=mRNA|length=7087bp|location=Sequence derived from alignment at Sc0000043:1263379..1270465- (Branchiostoma lanceolatum)
ATGACCTCCTACCACAGCAGGAAGAACCTGCAGCAGATTGTGGATGCCCT
CAACCAGGCACAGGTAGGAAGAGATACAGAAGTCATGTCTCAACATAGCC
AACTTATTGGTACTCCAAGGTACTGTAAATGCATTTAAGTTCGAATGGTT
TTTATTTCGCCCTTTCGAAAATGGAGTGTTCGCGATGGTTTTAAGTTTGT
GGCAGCGCTATAGTTACATACTGCTACAGTATTGGACAAAAATGTTTGCG
GGTTTTAAGTTCGCGGTGAAACGGTCGCCGCAAGAAACGTGAACAGAAAA
CCACCGCGAACATTTCTGCATTTACAGTATACTGTAGTTTTATTTGCTTT
TGAATTTCGTGAGGATTTTAGTTCATGGTAGGAGGGAAAAAAAGGTAGTA
CAGAAGTAACGTTAATACATTAAAAACACATACAGTGTATTTGCAGAGAG
GTCACTGCAAAAACCGTTATAGTAAAACCACCACAAAAGTTTTCAAGAAT
AGATTTTCCACTACAAGCATAGATCTTGATTCCCTTTACTATTTCAGGAA
CATTTTGGCTCGGAGGGCTCTGGTGATTTCCAGATGTTTGACTCCAGCGA
GTTCGAAGGTCGTGACCTGATGTTCCGTGACAACGTGCAGCGCCTGGTCC
CGGTGGGGCAGCGGAACACATGGCAGAAGTGGCTGGGCTCCAGCTATATG
GAGTCTGTTGGTCACCTGATCAGCCATGATGAGCAGAGGAACCAGCGTGT
TCTAAGTAAATATTTGTCCATGTATATGCACTATCTAACACCTGATGATA
AAAATAACGTATTATCATTGATAAGCAAATTTACTCTTTTTCATCAATTT
TCACTGTTCTTTATCTCTGCTCCGAGCTGATACTGATAAAAGTAAAAAGT
CTTGTTGGTCTTATGTCATATTCAGATTTACACAATTTTACTCGGTTAAG
TTTAATATATGACTTGAATTTGCATGTAACAAGTCATATTGAAATTGAAA
TAGTAAAGAATATAGAATACAGAAGCATATCTGATAATGGTGATGATGAT
ATGCCCATAGATAAGCAGATTCGCTGGTGTGCAACATCCGACGCTGAGAT
GGAGAAGTGTGAGCGGCTGAGCAAGACCCTGACTGAGGGTGGTTTTGTCC
CCACCGTCAAGTGTGTCCAGGCTGACAATGCTGAGCAGTGCATGCAGATG
ATCCACAGGAACCAGGTACAAACTTTGTAACATGGAGCCTATAGGCTATA
GAAGCATCTTATATGGGAGCAACATAGGCAAAATAAACAAATTTAACGGT
TCTCAGTGGCAAATGTGCTAGATGTTGGCACATCGGCAACCAAATCCGCA
GTGTGTTTTTTGGCACACAGTTTGACAGATTAGCCGAATAGGCTCGGTGG
GCGTCACTCCACCGTCCGGGAAGGTAGTGTAAAGTGCCTTTCCCAAGGGC
ATAACGTCGGGGCATGGTGAGTATCGAACTCGGGACTTATTGATTCTGAG
TTCAACGCTCTAAACGTTACGCCACGCCGACGTCACTGACGTAGGCAAAA
GAAACCAGATTTTTCCCCCAAGTATTCAAGAGTTATTGAGCTATTGTTTC
TTTTACATCAATCTTGTCTTGACTTTGTCAATTTGTTTCGTAGTATTGGA
CTATCTAGAATTGTCTTCATGTTATTTGCATATCAATTCATAGTTCGTGG
TTAAAGCCTGACCGGCAAATCTTACTCAGTGTCACTGACGAAAAGTAGTG
GATGCTACTTGAAACATCTAACCGTTTCCAAAATCATATTCAGTTGCTTG
AGTAACTGGTAATTAGCATATCTTATAACCTGGATGTCTAACCTTCATCG
ACGTATTCAAGAGTTAAATTTCAAAATCAGATCTTTAATGCTGGATATTA
ACAGTTATTTCCCCTTCAAGGCTGATGTGATCACCCTGGATGGAGGAGAC
ATCTACCAGGCTGGGATGAAGTACAACATGAGGCCCATCATGGGGGAGGA
CTATGGAAACGGTATGTACAACCAGCTCTTGCTATTGTGTATGTTGCTGT
ATTGAGGCTTGTGATTCTTGATCCAGCATTGTAAGATTTTGTATTTTGGC
AACACTTCAGGGGCTAGCCTGCTAGTATGCTGTAGATATAACACTGTGAT
TGAAGTTTTGTAATAAGTTGCACTCCCTTCACAGGTGATGCCAGCTACTG
GGCTGTCGCTGTGGTCCGTAAGGACAACTCTGAAATCAACATCAACAACC
TGCGTGGGCGTAAGTCCTGCCACACCGGTATCGGCAAGACGTCCGGCTGG
ATCATCCCCACCGGCTGGCTGGTAGACCAGGACTTTGTTCACACCGATGG
TCAGACTAGTCTGGTTCAGGCTGTGGGACACTTCTTCAGCCAGAGCTGTG
TGCCTGGTCAGTATGTCATTCTTGTAGTCTTGGATTACTTCTTGTTAGCA
GGATCTGTTTAGTCCAGAATGAGAACTTTTAAAGAAAAAGTTCTACACCT
CTATATTAGTCATTATTGGCACTTAAATGTTAACTGCATGTAAATGTTTT
CAGCTAGACGAACATTTGATATCTTGAAATGGTTTCCATCAAACCTTGTA
GATTCGGCACTGAATATACCTCTATTTACACAAAGGTGCCAAGAGCCCTG
AGTACGATCCCCAGAACACCAACCCCTCCAACCTGTGCTCCCTGTGTGCT
GGTGCTGGAGAGGACCACTGTGTGAGGAACAAGAACGAGCCGTACTACGG
ATATGCTGGGGCATTCAGGTATTCAGTCATTCTTTCAGTTATTTTACCAC
CAGAACATAGCTCAAGTTCGTGATCTGTTTGTCAGGTGTTCCTTGATACA
TACAGGCTCATGGTTTGATTTGCAAATATTTGAATGGATTTATGATGTTC
ACATGATTATCGATAGTTTGCTAAACCTAATCTTGATATGTGGTTGTCCC
CTCCAGGTGCCTTGCTGAGGGATCCGGTGATGTTGCCTTCATCAACCACC
TGACCGTCCAGGACAACACTGATGGACACAACCCTGAGAACTGGGCCGCT
GGCCTGCGCTCCAACGAGTTTGAGCTGCTGTGCACGGATGGTTCCCGCCG
TCCCGTGGACCAGTGGCGCGAGTGCAGCCTGGCCCGTGTTCCGTCCCACG
CTGTGATGACGTCCAACGACAGGAACCAGGAGTGGGTGGACAGGGCAGTG
CAGCTGTTGAAGAACACTCAGGTGAGAAATCTGAAGAATCTGGGTAAAAT
TGAGTACTGTAAATTCATTTACATTTGCGGTGGTTTTATGTTGCAGTTGG
AGGGGTAAGAAGGTTTTGGCTGTGTTATAAATTCTCAGTTTAAACAATTC
TACAGTAGAGTAGTCATAAAAAGGAGACATATTTACGGTGCCATGACTTT
GCAGTACAGCGACCACTGCGAAAAACCACAAAATTAAACCACTGCAAAAG
TTTCATGATTTACAGTGTATTGACCATATCCTCATCTGTGTATTGTAGAG
CTGAAAGAAGGTGTTTTGAAAATCACCATTTCCATCCACAGGACATGTTT
GGTACGGATGAGAACGAGCGTGGCTTCCAGATGTTTGACTCCGCCTCCTT
CGGCGGCCACGACCTGCTGTTCCGTGATGACACCCATCATCTGGTGGAGG
TGGGCAGCAAGGACAGCTGGGAGAAGTGGCTGGGACAGGAGTACCTGCGC
TGTATCCGCAGTCACCATGCTGTGGAGCCAGTCCAGCCTCACAGTAAGAT
CAAGTCTTTATTTCGAGCCAATGCTTTGAAAAATGCAAGCATTCTGTTGT
TGAATCATTGTGAATTTTTTAATTTTCAAGTGCTCACAGAAAGTACTATT
TTGTTGCACAGGCACCTTGCGCTGGTGCACCATCTCCAGCCAGGAGCAGC
AGAAGTGCCAGGAGATGAGCCAGCATGTCAGCAGGAACCTGAACCACAGG
CTGGAGTGTGTACAGGGCCAGTCTAGTGAGGACTGCATGTACAAGATCTC
TCACCACCAGGTGAGGAACACAACAGTTTATATACATATTATGATACATC
TTTTACAACAGAAAGCAGAATTAACTTCTAACATCCTGCAACGTACATTT
ATCAGGCGCATGAAGAAAGCAGACATTTCAATGTCTACATTAAACAAATT
TCATTTGGGAAGTTTTGTGTTATGAGGATCAGCGTTTAACAGTGCCAGTA
ATAGAACAGTATAGGATGTATGTCTTACAGCAAAGATTCTTCTAGTGCCA
ACACATGTGTTAGTGTTTAATAATGAACTGCGACCTCAATGACGTCATCG
CATAAGGGTCATGTGACCCACCCGTCACTCCGTTCCATCGAGTCAGGCGG
CCATGTCACAACATCCATGTTCCTAATAAACATCTGAAGTATCAGGTAAC
ATCCCCGAGCAGAGTCACTCTTTTGCGCCTCTTGGCTACTTACTGACGTA
GTTGCTTGTTAGTTTATGGTACTGGGATACGTAACTGTACTTCACATGTT
TTCATCATTACATTTGGTTCAATCTTCAGGCTGATGTGATCACCCTGGAT
GGGGGAGACATCTACACTGCCGGATCTGAGCACAACCTTGTGCCGGTCAT
GGGAGAGGACTATGGAAATGGTGAGATGGAGGGAACGTAGTTTTCTGTTG
TTCAAACCAGTACTTTTCATTTTAATGTTTGAAATCACTTGGAGACTTCA
ATTGTTGATTTTTGTCCTTGGTGCTGAAAAAGTTGTTTTGTTGTATGCCA
CTTGCAGGTGATGCCAGCTACTGGGCTGTCGCTGTGGTCCATAAGGACAA
CCGTGATATCAACATCAACAACCTGCAGGGCCGTAAGTCCTGCCACACCG
GTATCAGCAAGACCTCCGGCTGGAATGTGCCGGTCGGCTGGCTGATCCAG
CACAACCAGATGCAGGTGGACAGCAGGAAGTCCATCCCACAGGCTGTGGG
CAAGTTCTTCAGCAAGAGCTGTGTGCCTGGTCAGTGGAAACTTATTATTT
GTTATCTAGTAGGTCAGGTAATTTTCTTTAGCACACTGAAGTAGGCATTT
GGTTACCAATGTTCTATTTGTTACAGGGTTTGGCCCCAGAGAGAATGTTA
AAAGACTAATTTTCACCAGAAATGACCTGAATAATGTGCCTTATCAACAG
TTTTATAAAAATTGTCCTTTTAATAACTTAAAAGTAATTTCTAAAGTTTC
CTTATTCTAGGGTTTGTGTAACAGTTTGACATCAAACACATTGCTTTCAT
AATTCGCTCTTCAAAACCATTACAAAACTAAGCTAAGCTGTTCTTCCACT
GCTAACCAGGTGCCCAGAGCCCAGAGTACAACCCTGATGGCACCAACCCT
GAGAGCCTCTGTTCCCTGTGTGTCGGGGAGGGAGAAAACCGCTGTGTCCG
CAACACCAACGAACCCTACTATGGATACTCTGGAGCATTCAGGTACTAAA
AGGACCTTTGACAGGACTGTAACTGTTGAAATATGATATTCCATACACAT
GTGTGATTTTCGAAAATGTCTGACCATTTTCTTCCGCCACTAGGTGTCTT
GTTGAGGGTGCCGGTGATGTTGCCTTTGTGAACCATGTGACCGTGTATGA
GAACACCAACGGCCACAGTGAGGAGGAATGGACCAGGAACCTAGATGAGG
ACGACTTTGAACTTCTGTGTCCTGATGGCTCCAGGCAGCCATGGAACCAG
TACAAGTATGAATCTTTCTTTACAAATTGGCAAAGAAAACATTAAAACGT
CCTTTATATATATATCTGTTAGGACCTTGTCTGTAATCATGTAATCTGTA
TCTGTAAACTATCTGACCCTTACCTCCTGATCTCAATAAGAAGTGGCCTG
CAGGCTGTTCTGTGCTTCTCAATAATAAAAAAAAGGTTCAAGCAAACGAA
CCTCCCATAGTACAAGTCCATCTACTTCTTAAAAAGAAATAATCTGTTTG
CTTAGTTCATGAGTACCCTTGAGAACAATACCTCTTTGTTCTTTCACCAG
GGAATGTAACTTGGCCCGTGTCCCGTCCCACTCTGTCATGACGTCTCCCC
GTAGTAGGACAGACATTCAGCAGATTGTGGACTTCCTGAAACTTGCTCAG
GTGAGACGAGCTAAAGCTTGCTATGTACTACATCTTGCTATCTACATTAT
TTTCAAGACATTTATCCATTTCCAGAGCTACATACATGTAGCACCAGTGG
TACTGGTCTGATATTCTCTCTTCTCCCCCATTTCAGGATCACTTTGGTTT
CCAGTCCTACGGTGATTTTGAGATGTTTGACTCCAGCAAGTTCGGAGGTC
GTGACCTGATGTTCCGTGACAACGTGCAGCGCCTGGTCCCGGTGGGGCAG
CGGAACACGTGGCAGAAGTGGCTGGGCTCCAGCTACATGGAGTCTGTTGG
TCACCTGATCAGCCATGATGAGCAGAGGAACCAGCATGTGCTTGGTACGT
ACTGCTTATAGTCAATATTTCACCACATGATTCAGAACTAAGGTTGTAAC
TTTTCATATTTTAGTTTCCCATGATAGTTCAACAAGGTATTTTGACACTG
CAGCTCAATCATCAGAAATACTGGTAACTAGTCAACAGTAATTTTTTTGC
TGCATTCATCCCTGTGTGCAGCAATTCTTTCATGACTTGTGAATGCTAGA
TTCCACTAATAGTATTACCCGCTAGAAGTACAGGCAAACCTGCCCAAGAA
GACCACTCAGGGGACCTATAAAATCTGGTCTGTGTAGACAGGTGGTCAAA
AAATGGGAAAAATTATATAAGGGGCCACCAAAAAGTGGTCACATTGGCCT
GGTGGTCCTTATGTAGATAGGTTCAGTGCATTGCCTGTAGGCTACTTGAT
CAGTTCTACAAGAAGCAGGTAAGTTGTCAACAAGGCAATGCATTTTGAAT
ATTTGCAGCATAATATGTAAATGACACCTGATACCTGAACTTCAGACAAA
CAGGTGCGTTGGTGTGTGACGTCTGATGCTGAGAGGGAGAAGTGCGAGGA
ACTGAGCCGTGTCCAGAAGGAGGGTGTGTCCTTCCCCACCGTCAAGTGCG
TCCAGGCCGACAATGCTGATCAGTGCGGCCAGATGAT Coding sequence (CDS) from alignment at Sc0000043:1263379..1270465- >transcript:BL97205_cuf19 ID=transcript:BL97205_cuf19|Name=transcript:BL97205_cuf19|organism=Branchiostoma lanceolatum|type=CDS|length=1644bp|location=Sequence derived from alignment at Sc0000043:1263379..1270465- (Branchiostoma lanceolatum)
ATGACCTCCTACCACAGCAGGAAGAACCTGCAGCAGATTGTGGATGCCCT
CAACCAGGCACAGGAACATTTTGGCTCGGAGGGCTCTGGTGATTTCCAGA
TGTTTGACTCCAGCGAGTTCGAAGGTCGTGACCTGATGTTCCGTGACAAC
GTGCAGCGCCTGGTCCCGGTGGGGCAGCGGAACACGTGGCAGAAGTGGCT
GGGCTCCAGCTACATGGAGTCTGTTGGTCACCTGATCAGCCATGATGAGC
AGAGGAACCAGCATGTGCTTGACAAACAGGTGCGTTGGTGTGTGACGTCT
GATGCTGAGAGGGAGAAGTGCGAGGAACTGAGCCGTGTCCAGAAGGAGGG
TGTGTCCTTCCCCACCGTCAAGTGCGTCCAGGCCGACAATGCTGATCAGT
GCGGCCAGATGATGACCTCCTACCACAGCAGGAAGAACCTGCAGCAGATT
GTGGATGCCCTCAACCAGGCACAGGAACATTTTGGCTCGGAGGGCTCTGG
TGATTTCCAGATGTTTGACTCCAGCGAGTTCGAAGGTCGTGACCTGATGT
TCCGTGACAACGTGCAGCGCCTGGTCCCGGTGGGGCAGCGGAACACGTGG
CAGAAGTGGCTGGGCTCCAGCTACATGGAGTCTGTTGGTCACCTGATCAG
CCATGATGAGCAGAGGAACCAGCATGTGCTTGACAAACAGGTGCGTTGGT
GTGTGACGTCTGATGCTGAGAGGGAGAAGTGCGAGGAACTGAGCCGTGTC
CAGAAGGAGGGTGTGTCCTTCCCCACCGTCAAGTGCGTCCAGGCCGACAA
TGCTGATCAGTGCGGCCAGATGATGACCTCCTACCACAGCAGGAAGAACC
TGCAGCAGATTGTGGATGCCCTCAACCAGGCACAGGAACATTTTGGCTCG
GAGGGCTCTGGTGATTTCCAGATGTTTGACTCCAGCGAGTTCGAAGGTCG
TGACCTGATGTTCCGTGACAACGTGCAGCGCCTGGTCCCGGTGGGGCAGC
GGAACACGTGGCAGAAGTGGCTGGGCTCCAGCTACATGGAGTCTGTTGGT
CACCTGATCAGCCATGATGAGCAGAGGAACCAGCATGTGCTTGACAAACA
GGTGCGTTGGTGTGTGACGTCTGATGCTGAGAGGGAGAAGTGCGAGGAAC
TGAGCCGTGTCCAGAAGGAGGGTGTGTCCTTCCCCACCGTCAAGTGCGTC
CAGGCCGACAATGCTGATCAGTGCGGCCAGATGATGACCTCCTACCACAG
CAGGAAGAACCTGCAGCAGATTGTGGATGCCCTCAACCAGGCACAGGAAC
ATTTTGGCTCGGAGGGCTCTGGTGATTTCCAGATGTTTGACTCCAGCGAG
TTCGAAGGTCGTGACCTGATGTTCCGTGACAACGTGCAGCGCCTGGTCCC
GGTGGGGCAGCGGAACACGTGGCAGAAGTGGCTGGGCTCCAGCTACATGG
AGTCTGTTGGTCACCTGATCAGCCATGATGAGCAGAGGAACCAGCATGTG
CTTGACAAACAGGTGCGTTGGTGTGTGACGTCTGATGCTGAGAGGGAGAA
GTGCGAGGAACTGAGCCGTGTCCAGAAGGAGGGTGTGTCCTTCCCCACCG
TCAAGTGCGTCCAGGCCGACAATGCTGATCAGTGCGGCCAGATG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000043 | genome | Sc0000043:1263379..1270465 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL97205_cuf19 |
| Biotype | protein_coding |
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