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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL97136_cuf7 >transcript:BL97136_cuf7-protein ID=transcript:BL97136_cuf7-protein|Name=transcript:BL97136_cuf7|organism=Branchiostoma lanceolatum|type=polypeptide|length=170bp
MCFLSFSLMSEIDEYYKESEPSLISWKEHDICCVKYSVDNRWYRARVYSC
KGNNSFEVFHPDYGSREVVSADNLRPLLEKFQYQPAFSICCHLANLVPAG
GKDTWTATACEFLSSLVTNVACTLVTKGPVEEGSLPADLLYEHKVQETAL
TAAKSSLISVSQSLIHEGLA Run BLAST on NCBI mRNA from alignment at Sc0000040:1573048..1576763+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL97136_cuf7 ID=transcript:BL97136_cuf7|Name=transcript:BL97136_cuf7|organism=Branchiostoma lanceolatum|type=mRNA|length=3716bp|location=Sequence derived from alignment at Sc0000040:1573048..1576763+ (Branchiostoma lanceolatum)
CTGGCCATAGTGGTCATTTTTTGTCGGTCCCTTGAATTTTCCCCATCGAC
ATAAGCATTAAGAATTAGTCTATAGCGGTCACCTGTCCAATGTGGTCGCG
GTCAGGCGATTTTCTATGTTATAAGTACCTGTGCAGTGTGTATGTGAATA
AATTTTGCTCTGTATCTCAGTATAAACTTATGTCTTGACTCTCACTCTAT
ATAGTGGTCACCTGGCCATAGTGGCCAAATTGGCTCAGTCCCTTGAGTGA
CCACTATAGACAGGTTTGACTGTATTTCCTTTTCCATGTTACTGTACCTT
AAAGGAAAGAGTGAGCACTACTTTAATGTGTTTCTTATCCTTTAGCCTGA
TGTCAGAGATAGATGAATACTACAAGGAGAGTGAACCCAGTCTCATCTCC
TGGAAGGAACACGATATCTGCTGTGTGAAGTACTCGGTGGACAACAGGTG
GTACAGGGCCAGGGTCTACAGCTGCAAGGGCAACAACAGCTTTGAGGTAC
AGTTTGTAGGTTAGACTGGTCTTAGTTAGAGGGATGGGTATGCTTGAATT
TTTTTTTTTTTTTCTATGCTTAGCACCATTTCTTAGCTTAGCAGCTGACC
CGTAACTATACAGTAGGGCGCTGGCGAGGGACACTAAGGTGGCGATTAAT
ACAAGTCTTAAATTTGCATTTGTCCTTAAGAGTCACAATGTCCTGTGGTA
GAGAGTTCCAGAGTTTAACGGTGGCTGGGAGGTAGGTTCTTCTGTGTGAC
GTTGTGGACGACTTGACGGGTTCCAGAGCGTTGCAGTGTTGTGATCTTGA
CAAGCGGGTTTCACGTCTATGTACGTACGGTCCCGGGAGTAGGCTGATGA
GTGGTGAGGGAGCGTTGTGGTTGTACATGCGATGTAGGAGAGTGAGGGCC
CCTACGTTTCTACGTTGGCCCAGGGGCTGAATCTGGTTTCTGTCCAACTC
ATCTTGTGGGAGATTTATAAGTCTTATGGCTCTTCGTTGAATTGCATCAA
GCAGGTCCAGTGATGTGGGGCAAGCTCCCATCCAAACTGTAGAGGCAATT
TATGTTGGGTAAGGCCACACCAATTTAATTTCTTGGTTAACAGATTTTTT
TTAATTTTAGCAAAAAAGAAATCATGAAAACAGAAGGCTGGGGTGAAAAC
TTGCACCTGACCCTGTTGACTCCCTGAAATTTTGTGCACCAAAGTACAAA
CTTTCCTCTGAGATTCTGTTTTCCTGTTGATTTTCTAATCTAGCATTTTT
TTTATTTTAATATTCCGTTAACCAAGAAATTAAAATGGTGTGGCCTAAAC
GTCAACAAACATGTTGAAATGTGCAGGCACTTTTTTGTCAGTGTGTGAGA
TTATGTGTGAAGTACTCGGTAGACCAGAGGTGGTACAGGGCTAAGGGTCT
ACAGCTGCAAGGGCAACAACAGCTTTGAGGTTAAGTATCATTCTGATCCA
CACTTGAAAGTTCTTCTGTGTTGCTAGAGGCTATTCTGAATCAAAGTTGA
ACTGCAATAGCAAACACAAAAATTGGACCTACCCAAATTTTTGACTGATC
AGCTCCAGTCCTTGTCAAGAATTTGTCAGCACCAAGGAGTGTTCAGAACC
AAGGACAGGTGTGTTAACCTGTGTGAATGATGTTAAGCACTAAGGACAGG
TGTGATTACCTGTCTGTAGATTGTGTTCAGCACCAAGGACAGGTGCGTTT
GCCTGTGTGTGGATGGTGTTCAGCACCAGGGACAGGTGTGTTAAGATGTG
TGAGTATGGTGTTCAGCACCAAGGACAGGTGTGTTTACTTGTGTGTGGAT
GGTGTTCAGCACCAAGGATGGGGCTTGTGTTAACTTCAATTTGTTCAGTG
CCAAGGACGGGTGTGTTCACCTGTGTGTTGAAACGGTGTTTAAAACCAGC
GACATGTGTCTGTGCCTATTTGAATATATGTAGCACGTATAGGGCACTTG
GTTGGTATGTATGAATGGTTGTATAAAATTCACAAAAAGACAACCTTGGC
TAAGATGCTTTTGAAAATCATCATTAGATACTGTATATCTCACATTGGAA
GGAGTTAATTGTTTGACATCTCTCCAGATATTCCATCTTGATTATGGGAG
TAGAGAGGTTGTGTTGGTGCGCAGCCTCGGTCCCCTGGAAAGCCTTGGAA
AAGTATCACTATGTCTCATTGGAAAGTGTTTATAAAATATTAATTGTGTG
TCTTCTGACCTACAAATTTGCCAACACGAAAATTTGACTTTTTTGTCTGA
TCAACCCCACTGCTCACTGAATCACGTGTTCTATCTGCATAGCGTGACAT
CACAGTACTAGTGGATTGCTCATTCTTTGACAAAGACTGGAGCTCATCAG
TAAATAATTTGGGTAAGTCTTTTTTTTTGTTCCGGAAGTTACAGTTCAAC
TTTGATACAGAATGTTAATTGTTCTCTCCAGGTATTCCACCCTGATTACG
GGAGTCGGGAGGTTGTGTCGGCTGACAACCTCCGCCCCCTCCTCGAGAAG
TTCCAGTACCAGCCGGCCTTCTCCATCTGCTGCCACCTCGCCAACCTGGT
GCCCGCAGGTTCGTTTATTGTTTATTTGTTTATTGTTTATTATCTCAACA
TGGACATGTACTACCTACATACAACAGCTGTGTCAGGATGCAAACTGTAC
TTTGGAAGACCTGCCCAGTGCAATGAAAGGGCTATAAACGCGGGTGAACT
TGTCACGACCTGATGATGATGATGATGCTCTCCATTGTGATGATAGTTTT
GGGTCTGTGTGACATATGAAAACAAATGAGAATCTTTGAATATATAAGAC
GAAATACAAAATAAAACTTAAGCTATTGAACATAATAAGTCTGTTATGTT
ACACAGGATCAGTGCTAAACATGATTTACTAATTGTATAGAAATAAGTGG
AAATCATACCAAAATAGTAACTATATGAATTATTATATGGATTAGGTGGG
AAGGACACCTGGACAGCCACAGCCTGCGAGTTCCTGAGCAGCCTGGTCAC
CAACGTAGCCTGCACCCTGGTCACCAAGGTTAGATGACAGATTTTGTTTT
GTCAAACTGATGGAGCTCATGTTGGCATAAGTGCAGAGCGCGCGGCCACA
CTCCTCGCACGTTAAGAACCCACCACACCTTTCGAAAAAGAGTAGGGGCA
TGCCCTGGTGTGCGATGGTCCAAACCTTACAGTCTGGTCTGGGATGATAT
CTTGAAAAGGTGATAGTTCACCTGTTATGTCAATCCTTCCACAAATGTGG
TAAATCGAAATAAATAAATAAATAAGGACCAGGATGTTTGACCCAGAACC
AAGAGGTCCTAGGTTCGAATCCCCTGACATGCCATCAATGCTGTGCCATT
AGGAAAGGCAATTTACAGGACTTTCCTCACTCCACCCAGGTGTAAAATGG
GTACCTGACTTCAGTTAGGAATGTAAAAGACAGTGGAAGTAGAGAGCTGG
GCTCTCCCTCTAATACTGTGCTCTATAGACACAGTGAATAACAGCCTACT
GTCCCTAAGGCCTCAAAAAAGGCTAAGGGACTACTTTTACCTTTACCTAC
AACCCTACATCAACCAAAATCTGAACTTTTTCCAGGGCCCAGTTGAAGAG
GGCTCCCTCCCAGCGGACCTGCTGTATGAACACAAAGTGCAGGAGACGGC
CCTGACCGCCGCCAAGTCTAGTCTCATCAGTGTGAGTCAGAGTCTCATTC
ACGAGGGGCTGGCTCT Coding sequence (CDS) from alignment at Sc0000040:1573048..1576763+ >transcript:BL97136_cuf7 ID=transcript:BL97136_cuf7|Name=transcript:BL97136_cuf7|organism=Branchiostoma lanceolatum|type=CDS|length=2040bp|location=Sequence derived from alignment at Sc0000040:1573048..1576763+ (Branchiostoma lanceolatum)
ATGTGTTTCTTATCCTTTAGCCTGATGTCAGAGATAGATGAATACTACAA
GGAGAGTGAACCCAGTCTCATCTCCTGGAAGGAACACGATATCTGCTGTG
TGAAGTACTCGGTGGACAACAGGTGGTACAGGGCCAGGGTCTACAGCTGC
AAGGGCAACAACAGCTTTGAGGTATTCCACCCTGATTACGGGAGTCGGGA
GGTTGTGTCGGCTGACAACCTCCGCCCCCTCCTCGAGAAGTTCCAGTACC
AGCCGGCCTTCTCCATCTGCTGCCACCTCGCCAACCTGGTGCCCGCAGGT
GGGAAGGACACCTGGACAGCCACAGCCTGCGAGTTCCTGAGCAGCCTGGT
CACCAACGTAGCCTGCACCCTGGTCACCAAGGGCCCAGTTGAAGAGGGCT
CCCTCCCAGCGGACCTGCTGTATGAACACAAAGTGCAGGAGACGGCCCTG
ACCGCCGCCAAGTCTAGTCTCATCAGTGTGAGTCAGAGTCTCATTCACGA
GGGGCTGGCTATGTGTTTCTTATCCTTTAGCCTGATGTCAGAGATAGATG
AATACTACAAGGAGAGTGAACCCAGTCTCATCTCCTGGAAGGAACACGAT
ATCTGCTGTGTGAAGTACTCGGTGGACAACAGGTGGTACAGGGCCAGGGT
CTACAGCTGCAAGGGCAACAACAGCTTTGAGGTATTCCACCCTGATTACG
GGAGTCGGGAGGTTGTGTCGGCTGACAACCTCCGCCCCCTCCTCGAGAAG
TTCCAGTACCAGCCGGCCTTCTCCATCTGCTGCCACCTCGCCAACCTGGT
GCCCGCAGGTGGGAAGGACACCTGGACAGCCACAGCCTGCGAGTTCCTGA
GCAGCCTGGTCACCAACGTAGCCTGCACCCTGGTCACCAAGGGCCCAGTT
GAAGAGGGCTCCCTCCCAGCGGACCTGCTGTATGAACACAAAGTGCAGGA
GACGGCCCTGACCGCCGCCAAGTCTAGTCTCATCAGTGTGAGTCAGAGTC
TCATTCACGAGGGGCTGGCTATGTGTTTCTTATCCTTTAGCCTGATGTCA
GAGATAGATGAATACTACAAGGAGAGTGAACCCAGTCTCATCTCCTGGAA
GGAACACGATATCTGCTGTGTGAAGTACTCGGTGGACAACAGGTGGTACA
GGGCCAGGGTCTACAGCTGCAAGGGCAACAACAGCTTTGAGGTATTCCAC
CCTGATTACGGGAGTCGGGAGGTTGTGTCGGCTGACAACCTCCGCCCCCT
CCTCGAGAAGTTCCAGTACCAGCCGGCCTTCTCCATCTGCTGCCACCTCG
CCAACCTGGTGCCCGCAGGTGGGAAGGACACCTGGACAGCCACAGCCTGC
GAGTTCCTGAGCAGCCTGGTCACCAACGTAGCCTGCACCCTGGTCACCAA
GGGCCCAGTTGAAGAGGGCTCCCTCCCAGCGGACCTGCTGTATGAACACA
AAGTGCAGGAGACGGCCCTGACCGCCGCCAAGTCTAGTCTCATCAGTGTG
AGTCAGAGTCTCATTCACGAGGGGCTGGCTATGTGTTTCTTATCCTTTAG
CCTGATGTCAGAGATAGATGAATACTACAAGGAGAGTGAACCCAGTCTCA
TCTCCTGGAAGGAACACGATATCTGCTGTGTGAAGTACTCGGTGGACAAC
AGGTGGTACAGGGCCAGGGTCTACAGCTGCAAGGGCAACAACAGCTTTGA
GGTATTCCACCCTGATTACGGGAGTCGGGAGGTTGTGTCGGCTGACAACC
TCCGCCCCCTCCTCGAGAAGTTCCAGTACCAGCCGGCCTTCTCCATCTGC
TGCCACCTCGCCAACCTGGTGCCCGCAGGTGGGAAGGACACCTGGACAGC
CACAGCCTGCGAGTTCCTGAGCAGCCTGGTCACCAACGTAGCCTGCACCC
TGGTCACCAAGGGCCCAGTTGAAGAGGGCTCCCTCCCAGCGGACCTGCTG
TATGAACACAAAGTGCAGGAGACGGCCCTGACCGCCGCCAAGTCTAGTCT
CATCAGTGTGAGTCAGAGTCTCATTCACGAGGGGCTGGCT
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000040 | genome | Sc0000040:1573048..1576763 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL97136_cuf7 |
| Biotype | protein_coding |
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