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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL97112_cuf4 >transcript:BL97112_cuf4-protein ID=transcript:BL97112_cuf4-protein|Name=transcript:BL97112_cuf4|organism=Branchiostoma lanceolatum|type=polypeptide|length=155bp
EQTSGMATGQSTRPATPTVQLDFGGDGGSTSVYHPVTKTISEQPGDNTQG TKLTSSRPPVGNRATPDQALGNGLDSIYAESVSPNPQDVLQKLAQIADVS GDAAELGQPTSAAEEKAQMCRKAIKTLLSETGQAQTPQRVQKLAELSSLV IKSCP Run BLAST on NCBI mRNA from alignment at Sc0000052:1504239..1506405+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL97112_cuf4 ID=transcript:BL97112_cuf4|Name=transcript:BL97112_cuf4|organism=Branchiostoma lanceolatum|type=mRNA|length=2167bp|location=Sequence derived from alignment at Sc0000052:1504239..1506405+ (Branchiostoma lanceolatum) CTGAGCAGACAAGTGGGATGGCCACAGGCCAGTCCACCAGACCAGCAACT
CCAACCGTACAACTGGACTTTGGGGGCGATGGAGGGTCCACGTCTGTTTA
CCATCCCGTCACTAAAACCATCAGTGAGCAACCTGGAGACAATACACAAG
GTTATACAATTAGAAAATGTGTATATGAGACATTGATGCTGTTCTTCAAG
TAATTTACAATTTGTCCAGTGTACCAAAGGCATGCAGTGTGATAAAACTG
TTCTTATTCACTCACTCAGGCGTAAATTTGTACACGGTTCCTTAATCATG
ATGTTCCTTTCAGAGATTTAAGGACTGAGGCATTTAAAACCTTTTTTTTC
TATTGACAGTAAAATCTGCTCTAAGACTTAATATTTCTTTCAATGTCTTA
AATTATGGAGAACAAAAAGATGCCCATGATTCAATGCCATCTGCAAAGGG
ATTGACTAATAATACTTCAATCTCTTTCTGCTGTGCAGGAACCAAGTTGA
CCAGCAGCAGGCCGCCGGTGGGTAACAGGGCGACACCTGACCAGGTATGT
GGTTCTACAGCGGAGGGAATTTTGGGGGTGAATTATATGGTTAAAGGTCC
CCTAACCAATGAATGGAGACCATTTAACCACCATATTTGCATTTGAAAGA
CTTACAAACTATAATCATAGTTATTATAATTATTATGACTTTATGAATCA
AAAGGATTCATGATACACAGTCTACTTTATTTAATACCAATTAGAGTTTT
AGTTATCATACTTTGATGAAGGTTAGACATCCACTAATAAGATATGCCAA
AAATTGTTAGTATATATATATACGCAGTAGCAACTGGATAAAATTTTGAA
ACAGTCAGACATTTCAGATAGCATCTGCTATAATCTTTCTTTAGTCACTG
ACGAAAGACAGTGGATGCTGTCTGAAACGTCTGACTGTTTCAAAATTCTA
TCCAGTTGCTTGAGTAATTATTTTTGGCGTATTTTAGTTATCATGTCTGT
TGAAAACCTTTAAGAGTGTGTTAATCAAAAGGAAGTGACCGTGCACTGTA
CTGTAGTTGCAAGAGAAATATGAACAAAGGACTCCAAGATGTTTCATATT
AAGTACTGTCCTTTATTCTTGTTCAATAGGCTCTTGGTAACGGTCTGGAC
AGCATATATGCAGAATCCGTCTCCCCAAACCCACAGGATGTACTGCAGAA
GTTGGCTCAGGTTAGTCACACCCAGTACTACTTTGCTTCCTGTTATTCCC
TCAACAAAATGTCACAGATCTCCACCATAGTAGAATGGAACTCATTGTCA
CCAAGTACTGTAGGAGCATCTTCACTAAGTAGCTTCAAAGAACGATTGCA
GTCATGCAGATATGCAAAGACTAGGTGTAACAGACTGTTCGGTGTAGTAT
AACCAGCTACCGGTTACTAAAGCCACACCAACTTGTTCCCAGATTTTAAA
ACATGATCATGCTAGATCGGAATATCAACATGAAAACAGATCAAAGTCAG
TGGCTTGATACACACAGTTTCTGGAGTGAACAGAGTTAGAAGAAACTTTT
GCTCCAACCCTTTGTTTTCATGATTGTCCACTTGCTAAAATTCAACAGAT
GTCTGAAAACCAAATTAAATTGGTGACTGTGGCCTAATTCTAAATTCATG
ACAAACTCTTTCAATAATCTTTTTGGTGTGTGTGAAAGATTACTGTGTGA
TGAAGAAGACAAGCAAATTACCTGGACTTGTACATTATTTTAAGAACACA
CAATTAATCACAATTAATAATCATTATTACTAATTCTTTGTCCTTAATGC
AACTTTGTATTAACGACTAACTTTATTATGAAAATTTGTCTTTCATTAAT
GAGAAGATTGCGGATGTCTCTGGAGATGCTGCTGAGTTGGGGCAGCCAAC
ATCAGCTGCTGAGGAAAAGGCACAGGTAAGCCATGTTTGTAGTCTGTAAA
ATGTTAAAGCAATGGGAAACATAAATCTTTCTTTTGGAAACATGGGGACG
TTTTATGGAGTTTGGACCAGGATAAGGTGTTCAATCTTGTTATCCGTTGT
TGTAGATGTGCAGGAAGGCAATTAAAACACTGTTGTCTGAAACGGGTCAG
GCCCAGACGCCGCAACGTGTGCAAAAGCTCGCTGAGTTATCATCGCTTGT
CATTAAGTCCTGTCCTG Coding sequence (CDS) from alignment at Sc0000052:1504239..1506405+ >transcript:BL97112_cuf4 ID=transcript:BL97112_cuf4|Name=transcript:BL97112_cuf4|organism=Branchiostoma lanceolatum|type=CDS|length=2325bp|location=Sequence derived from alignment at Sc0000052:1504239..1506405+ (Branchiostoma lanceolatum) GAGCAGACAAGTGGGATGGCCACAGGCCAGTCCACCAGACCAGCAACTCC AACCGTACAACTGGACTTTGGGGGCGATGGAGGGTCCACGTCTGTTTACC ATCCCGTCACTAAAACCATCAGTGAGCAACCTGGAGACAATACACAAGGA ACCAAGTTGACCAGCAGCAGGCCGCCGGTGGGTAACAGGGCGACACCTGA CCAGGCTCTTGGTAACGGTCTGGACAGCATATATGCAGAATCCGTCTCCC CAAACCCACAGGATGTACTGCAGAAGTTGGCTCAGATTGCGGATGTCTCT GGAGATGCTGCTGAGTTGGGGCAGCCAACATCAGCTGCTGAGGAAAAGGC ACAGATGTGCAGGAAGGCAATTAAAACACTGTTGTCTGAAACGGGTCAGG CCCAGACGCCGCAACGTGTGCAAAAGCTCGCTGAGTTATCATCGCTTGTC ATTAAGTCCTGTCCTGAGCAGACAAGTGGGATGGCCACAGGCCAGTCCAC CAGACCAGCAACTCCAACCGTACAACTGGACTTTGGGGGCGATGGAGGGT CCACGTCTGTTTACCATCCCGTCACTAAAACCATCAGTGAGCAACCTGGA GACAATACACAAGGAACCAAGTTGACCAGCAGCAGGCCGCCGGTGGGTAA CAGGGCGACACCTGACCAGGCTCTTGGTAACGGTCTGGACAGCATATATG CAGAATCCGTCTCCCCAAACCCACAGGATGTACTGCAGAAGTTGGCTCAG ATTGCGGATGTCTCTGGAGATGCTGCTGAGTTGGGGCAGCCAACATCAGC TGCTGAGGAAAAGGCACAGATGTGCAGGAAGGCAATTAAAACACTGTTGT CTGAAACGGGTCAGGCCCAGACGCCGCAACGTGTGCAAAAGCTCGCTGAG TTATCATCGCTTGTCATTAAGTCCTGTCCTGAGCAGACAAGTGGGATGGC CACAGGCCAGTCCACCAGACCAGCAACTCCAACCGTACAACTGGACTTTG GGGGCGATGGAGGGTCCACGTCTGTTTACCATCCCGTCACTAAAACCATC AGTGAGCAACCTGGAGACAATACACAAGGAACCAAGTTGACCAGCAGCAG GCCGCCGGTGGGTAACAGGGCGACACCTGACCAGGCTCTTGGTAACGGTC TGGACAGCATATATGCAGAATCCGTCTCCCCAAACCCACAGGATGTACTG CAGAAGTTGGCTCAGATTGCGGATGTCTCTGGAGATGCTGCTGAGTTGGG GCAGCCAACATCAGCTGCTGAGGAAAAGGCACAGATGTGCAGGAAGGCAA TTAAAACACTGTTGTCTGAAACGGGTCAGGCCCAGACGCCGCAACGTGTG CAAAAGCTCGCTGAGTTATCATCGCTTGTCATTAAGTCCTGTCCTGAGCA GACAAGTGGGATGGCCACAGGCCAGTCCACCAGACCAGCAACTCCAACCG TACAACTGGACTTTGGGGGCGATGGAGGGTCCACGTCTGTTTACCATCCC GTCACTAAAACCATCAGTGAGCAACCTGGAGACAATACACAAGGAACCAA GTTGACCAGCAGCAGGCCGCCGGTGGGTAACAGGGCGACACCTGACCAGG CTCTTGGTAACGGTCTGGACAGCATATATGCAGAATCCGTCTCCCCAAAC CCACAGGATGTACTGCAGAAGTTGGCTCAGATTGCGGATGTCTCTGGAGA TGCTGCTGAGTTGGGGCAGCCAACATCAGCTGCTGAGGAAAAGGCACAGA TGTGCAGGAAGGCAATTAAAACACTGTTGTCTGAAACGGGTCAGGCCCAG ACGCCGCAACGTGTGCAAAAGCTCGCTGAGTTATCATCGCTTGTCATTAA GTCCTGTCCTGAGCAGACAAGTGGGATGGCCACAGGCCAGTCCACCAGAC CAGCAACTCCAACCGTACAACTGGACTTTGGGGGCGATGGAGGGTCCACG TCTGTTTACCATCCCGTCACTAAAACCATCAGTGAGCAACCTGGAGACAA TACACAAGGAACCAAGTTGACCAGCAGCAGGCCGCCGGTGGGTAACAGGG CGACACCTGACCAGGCTCTTGGTAACGGTCTGGACAGCATATATGCAGAA TCCGTCTCCCCAAACCCACAGGATGTACTGCAGAAGTTGGCTCAGATTGC GGATGTCTCTGGAGATGCTGCTGAGTTGGGGCAGCCAACATCAGCTGCTG AGGAAAAGGCACAGATGTGCAGGAAGGCAATTAAAACACTGTTGTCTGAA ACGGGTCAGGCCCAGACGCCGCAACGTGTGCAAAAGCTCGCTGAGTTATC ATCGCTTGTCATTAAGTCCTGTCCT
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
Sc0000052 | genome | Sc0000052:1504239..1506405 + |
Properties
Property Name | Value |
Transcript id | BL97112_cuf4 |
Biotype | protein_coding |
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