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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL97093_cuf8 >transcript:BL97093_cuf8-protein ID=transcript:BL97093_cuf8-protein|Name=transcript:BL97093_cuf8|organism=Branchiostoma lanceolatum|type=polypeptide|length=178bp
GSFSPDGLEQCETCQIGYYQPEEGSSSCLSCEGNYTTARRGTRTHKDCGV
LCQPGYVSATGLEECYPCPEGYYQQSPGMSVCNACYKGGIRPGKGAKKGA
ASIFECLGRAAYVDVNVTQFELAADLTFNDCFSDPCENGGDCRSISAGYV
CDCVAGYTGVNCEVEIDECLSSPCLNNA Run BLAST on NCBI mRNA from alignment at Sc0000001:7094432..7101432- Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL97093_cuf8 ID=transcript:BL97093_cuf8|Name=transcript:BL97093_cuf8|organism=Branchiostoma lanceolatum|type=mRNA|length=7001bp|location=Sequence derived from alignment at Sc0000001:7094432..7101432- (Branchiostoma lanceolatum)
CTGGCAGTTTCTCCCCTGATGGACTGGAGCAGTGTGAGACGTGTCAGATT
GGGTACTACCAGCCCGAGGAGGGGAGCAGCTCCTGCCTGTCCTGCGAGGG
GAACTACACCACCGCCAGGAGGGGCACGCGCACGCACAAGGACTGCGGAG
GTCAGTAGTGGCCAACTATTGGACATAAAAAAAACAAGGGGTACTTCAGG
AACTTACAAAAAAACTTGCAAAGCCAAACAACCCACCCAAGGAAGGTTCA
AACACAATAAATGTCTCTCTTGGGACTATACAAAGTGTAAAGTGTAAATT
TCTGGTATAGTGGAGGTCAGTTCTACAGGGCAAGGAAGAATACATATTGA
TTCTAAAGAATGCAAGTGCTGGCAATCTATGCAGTGGTTTAATTCATGTC
TGCAGTTTTTGCAAAATTATCACAACGCAAACAACACAGATTTTTGTCAG
TGATGCACTCATTGTGCTCACCACAAACTTTTATCACTGCTCTGCCTCCT
TTGACCATGAAATCAAATGCCCTGGAACTTAATTGAACACAAAGTCATCT
TGACTATCAGTGGTATGATTATCATATCAGGATTTTATGTTGCATGTTCT
CTCAATTCAACTTTTAATTAAAGATAAAACTGAGTCTTGGATCCTTTTTT
ACCAATTCTTCCCAAGTGAGCAATGCATTTACTACCAGAACAATGTAGAA
ACTTAGAAACAACTATCCATTTCATTGTACCTTGTGATGATAAATTGGAT
TTGGATAGCTTTGGTCTCTTGTTGCTTGACACAGTCTCCCCCTGTTCTTC
CCCTGGCCCCACCAGTGCTGTGTCAGCCTGGTTATGTGTCAGCCACAGGT
CTGGAGGAGTGCTACCCCTGTCCTGAGGGGTACTACCAGCAGAGTCCAGG
CATGTCTGTCTGCAACGCCTGTTACAAGGGCGGCATTAGACCTGGCAAGG
GAGCCAAGAAAGGGGCGGCTTCCATTTTTGAGTGTCTCGGTAAGATGTTT
AGATTTTTGTTTGTTTGTATCACGCAGCAACCTATAGCTCATAGTTGGAG
ATAAAATTATGCATTTTTGTGTGTCTTCGTTTGTTTGTATTGCATACCCG
GTAATATGCCTCAAACAAGAGCCCACTATGCCCCACTATACAATCCCATG
GCCTCTACTCATACAATTTATATTCAGATATCACATAAAAAAATGTAGCA
ACTTTTATAAACTTTCAGACACATACATGTATACTATCAAGCACCATCAG
TAACTAGGCTGATTAACTGTAGAGACTCTGTTGAAAATCAAACTCATTGA
AGTGGAAGCAAGTGGGGATATGACTTCTAGATGTAATCTTACTTCTTGTA
CATAATATGCATAGTTTACTCTTATATTATTACAGCCTTTCTCCACAGTA
CACCACTTAACAGAGCTATTCAACAACCATGGGTTCTGATGTATAAATTA
CGTATAATTAGGATGTAAATCAAATACTGCATTTGATACTGAAAAGTCCT
CTCTCTATGGAGAATGAAACTTTGATGTCCATAAAAGTTATATATACAGA
GTGACATAGTTATGTGTACAGACATATAAGCCTTTGGCAACAAAGGTACT
AGTAATCAAAACTGGCATGCTTCCAAAGGAACTGTATTGCATCATGATAT
GCAAGTTTGCAAAGCTGGAGCTACATTTCACACTGCACCATTACATTCTG
GACAGCACACTTTGCTTTTCTTCCCTGTATAGTAAAAATTAATGTACAGT
TATGACTAGAAATATGACCATGTTACTCTCATACTTGTAGCAGAATGTAC
ACCTTAAACTAAAGATACATCCATAAATGTATACTGTACAATGTAGTAGC
TCTTAAAGTTACACAATACTGTACAATCATGTAGCTAGCTAGTTATAAAG
CAGTAGAAAAAGCAATGACAATAAGTTATAACTTACATTTGCCAAGGGTA
CTGTCAACCTTGTTGTTAGTAGTCCATTTGGATCATTGGATGAATGATAT
ATTATTGGTAATATGAAACAAAGATGGATTATCAAGTCTGATATTTCCAT
CCTGTCCTGTACATGTCATGAATGTCACTGTCACAAAACATCAGAGAATT
GGTCCTCCTTGTTGTCAGCTCGGCGGAACTTCTTGCACTTTTTGTGGTTC
TTGTGGGAGTGGTACGCGTGCGTCTTGGTCAGCATGTCCGCTACTTCCTC
CGTCTCCTCGTCGAACTCCATCGTAAGTTCCGCGATCAGGCTCCGCCGCG
CCTGTCCCGGCGACACGTCTCCGAACGTGGGGTTATTCACGACCTGGTCC
GTTCCGTTCTTCCAGCTGACAGGGTACCCGCAGATCTCTGTGTCGGTTTT
GACGATGGGGTTGGGGTGATCGTTCTCGGAGGGGATGATGAGCTGCTGCT
CGATCTGTCTCTGCTGCCTGTCCAGACACATCACAACCCCCATCACAATC
GCAGCGATCAGAACAACGACCACGCCAAGCGAGATGAACGTCAACTGGGT
TGCCGTCAGACCTGTCTCATGTTTACCATGAGTGGTGACCTTAGAGAGGT
CGGCGTAAGCAGTGTGGTTATCCCTACTGTCTGGTGTAACCGGCTTGGTG
TAGGCTCTGGCAGTTTTCTGGTCATCCACCCAGGGGTTGCTGAAGTAGTA
ATCACCAGTGTACACACTTCTGGTGGCTGTTGACAACCCTTGTGTTGGGA
TGACTTCAACAGATGTTGTTGTACTTACTAGTGATGTGCTGGCAATGTCA
CTGTTAGTTGGCTGGCGTGTCGTTGTGGTGGAGATATCTTCAGCCAAGGT
GGATGTCCTGCATGCCAACGCTGACTGTTTGACAAAGCGCAGCTCCTGGC
CTGCCTGTGACTTAGGTGATTGACAGGTGACACGAGTTCTGGCTGTCGTG
TCCTGCAACCACTCCCACAGTCCCTGCAGTTCACAGTCGCATCTCCAGGG
GTTGTTGTTGAGATTCAGGCTGCGTATCTGCAGTAGTGGTAGGATCACAT
CTTCGTCCAAAGACTGCAGACTGTTGTTGTATAAGGATAGGGATTCCAGT
GCCACAAGACCTACAAATGACACACCTCCAATCCACTCAATCGTCTGGTT
TGACAAATCTAAGGCTTCAAGGGAGTACAAGTTTTTAAAGGCAGTTGTGT
TGAGTGTTGTGAACTGGTTACGGTGAAGGCTTAATGTTCTCAGACTTGGG
AGGGCGTTGAATGGATCCGTTGGTAAGTCTTTCAGTTTGTTTCCTCCGAG
AAACAAGTAGGTAAGTTGTTGCAGCATTGCAAAGGCATTGTTCTCCAGAG
TTTCTATCTCGTTGTCTGCAAGTTGAAGGAGATAGAGGTTCTTGGTTTCT
GCGAAAGACGTGGTTGGTACAATAGTCAACTTGTTCTCATTCAAATATAA
ATGTTGCAAATTCTCTAGTCCAACAAAGGCTTCAGTTGATATACTTGCAA
TGGAGTTTTTCTTGAGGTGCAAGTCAAGCAAGTTCTTTAGCCCTTGAAAG
GCAAACTTTTCCAGTCTACTAATGTTGTTGTTATTCAAATGCAATGTTTT
AAGACTGAGCATTTTGAAGAACAGGCCACTGGAGAGAGTCTGAATATTGT
TGTCGTCTAAATCCAGAAGTTGCAGCGTGCTGAAACCTTTGAAGAGTCTA
CTAGCGATCTGACTGATGTTGTTGTCTGGAAGGTTTAGGTATCTCAGTTT
CTTCAACCCCTTGAAAGCGTCTTCCTCGATAACGTGTATGTTACTTACAG
CCAGTGACAGTCGTACTAGGTTGGTCAGGTTGGCAAAAGTGTTCGATCGA
ATCACAGTGAAGTTGTTTCCTTGGAGGTACAAGCTCTTTGTTGAAGGCTG
TATCTCTGCGGGTATGGCTTTCAGGTTACGATGGTTACAGTACACCGTTC
CTCGCTTGCAAACACAGATGCGTGGGCAACGCTTCTTTTGGCCTTCGATA
TTGGTTGCCATGAAAAGCACAACAACAACAAGGACACATAGCTTCATAGT
TGCAGCCATTTGGAATCTGAAAATAGAAAGTTTTAAAATGTTTTTTTCAG
ATTTTTAGCCCTTAAATGAAGATTATGCGATGTGTATACACATGTGTCAG
TAAGGTTACTCTTATCACAAACTGTCATTTCCTCTTAGATCAAAGCCAAG
AGGAAATGTTTCAGAGTGAATCCAGTGGTGTTAACAAAAATTAAGGCAGA
CCACCCATGATTTTCTGTTCCGTAATCCCTTTCAATTGCTTCAAATGCAG
GTGCATAATATATCACATGCAGGAAAACATTGGAACTTCAAATTTGATTT
CAGATAATTCCATCAAGAATAGATCTCTTCAATTTAAACCTGTTGGAGAA
TGGAAGGCATACATTTGTAAACTTAATGTTTCATGCTAAATGACCTCTCT
GTGTCGTTAAGAGCTGGAAATCCGATTATTTCAGCATTCAGGAATAATTC
CACCAAACTTATAAGACATTAAAAAGATAACATTCTTTTAAGCTATCTGT
ATGATTGTAAGAAAAATCAGTCATCTTTTGAATTGACTAAGCCTAATATT
TTTGACAGTACAATATCTGCTTAGTTATCACAAGTCTACGAAACTTATTT
AATTGGCACGGTGACAGAAGCGTTACGAACTTGACAGCAGTTCAAAAGTG
CATGGAGATTTCAATCTCCTTTTCAACCTCAAAACGGACGATGCTTGTAC
TAAAGCATGAGAGTGCTAAAACAAACAATCAAATCAAAGACAAGCTTCAA
TGACATTACCTTGACAGGTGGTCGTTCCACAGAGAAATTCTCCAGTCAAC
GTTCGGGTACGTAACAAAAGAAAGGAGCTGAACTGCCACTGGATGCTGTA
TAATGTGGATGTCTGCTCGGTATCGAGCTAGTTAAGAACAAGCTGCGAAT
TTCCTGTGCCGCTACGGGCAACTCCCTTACATCCTGTATATCACATGATC
AGGATGGGCCTATCACATTGAAAAGACGGGGACAAACTTTCTCAACCAAG
TTTTACTGGAATAGATTATTAGAAGCACTAGGTAATGTCTACCAGTGGAC
TAGGACAACTCTGTAGTCCTTGAACAATTGTGTGGCCAAAGGCCTATAGA
AATAAAAATGGGCACTGCTTTATTTAATTATACACCAAAAGATGTGGGAA
GGATTTTAACATGTAATGTCTTCTGGGGTTGATTCTATTTTACAAGCTAT
TGACATATCATCACTTCACAACTTCCAATGGTGTATTTTCATTGCCTGAA
TCTTTATCTTCTGAGAACAAAAAAAAAAAAAGTTTGGTGCAAGCAAAAGG
GCCATGACAAAGTGTAGGACAAGGGACTCAGGGTTGTACAAGGTTGTGTT
TGCTATATACTAGTAGGCATTGTCACTTCACAACTTCCAATGGTGTATTT
TCATTGCCCGAAAGTTTATCTTCTGAGAGCAAAAAAAAAGCTTGGTGCAA
GCAAAAAGGCAATGACAAAGCATAGGACAAGGGACTTCGGGTTGTACAAG
GTTGTGTTTGTGTGCGTGATGTGAGAAGGAAGTGGGTCCCTACAGGAGGA
GGGGAGGGTGTTATCAGGGGAAACAGGTGTCAGGATGTTTCCTCTTCTCA
AGGAAGTGCTGGCCTGGGAATTGGGACATCAGCACCATAGGGGATTACCA
CCATCTATAACTGTCAAACATGCACCACCAGCAGAAGGAGGGGGATATAA
TCGCCCTTGCAACGTTATCAGATATTAATCAGTTTCTGCAGAGGAATGAA
CAAGTAAACACAAGATGCCAGTCAATTTCTTTAGACACAAATGTTTTGAA
AATTTTGGCAACTGACACCAGTTCCTTTTCAGCAGTCAGCTGTTTTTCTA
GGGTACATAATTTGTAAACCATACCTAGTTGTTACAACTTAGAACATATT
TGATTTGTCTATAGATTGAGTTTGATACTTTGTCTACTATTAGCCTTGTA
CATAAATACAATATGAGTGGTCCAAAAATAGTTTGTACATGTATTACATG
TAGTCTATTCATCCTATAATAACATCACATGTCATTGATTTTGTTAAGAA
TAAGATGCTTGTTACAGAATCAGAATTACGGTATATTGTAAGCACAGGGC
CGGGATAGCTATCATGATACAGTAAAACTGCCCAAAAAGACCAATCAGGG
GACCAATAAAACCTAGTCTATGCGTGGACAGGTGGTCACTGTAGACAGGA
TTCGTAATGCATATAATGGGAAAAATTATCTAAGGGATCACCAAAGAATG
GTCACATTGGCCATTGCCCAGGTGGTCTTTATGTAGGTGGTCACTTTTAC
AGGTTTGAGCAAACTTTATAATGTTAGTGAACTGTGTCTCCCTGTAGGAA
GAGCTGCCTATGTGGACGTTAACGTGACCCAGTTTGAGTTGGCAGCAGAC
CTGACGTTTAACGACTGTTTCTCCGACCCCTGTGAGAATGGAGGGGACTG
CAGGAGCATCAGTGCTGGCTATGTGTGCGACTGTGTGGCAGGCTACACAG
GTAAAGCCACCCTCTCACGGGACCCGCGGCACGCTGGCGTCGTCGCTGCG
TCCTAAACTGGATTTGTGTTACCCTTGACTTTATAATGGGAATATCATTC
AAAACGTACAAGTATGACCCAAAAAACAACAAAACACACAAAGCTTTTAA
AAATGTGTTTTTTGTCAATGAAATTCGTTGAGTGCTTTGTCAATTCGATT
GGCCGCAGCGACAACGCCGGCGTGCCGCGGGTCCAGTGAGAGGGGGGGAT
TTTGACACCTTGTAAATACTTTTGGTCTAGAGTTGTTTTGCAGTATTCTG
TGTTGCTATTATTGTTTCAACCATGATACAATGTACTCCAAACTCTTGAT
TTGTACCGTACTGCTAAATCTAGATGCTGTGTTCCTAATACATGACTTGT
GCAGACTTCATGAACAGTGTCCATTTTTCTTTCTTCCCCAGGTGTAAACT
GTGAAGTGGAGATTGATGAGTGCCTGTCCTCCCCTTGTCTGAACAATGCC
A Coding sequence (CDS) from alignment at Sc0000001:7094432..7101432- >transcript:BL97093_cuf8 ID=transcript:BL97093_cuf8|Name=transcript:BL97093_cuf8|organism=Branchiostoma lanceolatum|type=CDS|length=2136bp|location=Sequence derived from alignment at Sc0000001:7094432..7101432- (Branchiostoma lanceolatum)
GGCAGTTTCTCCCCTGATGGACTGGAGCAGTGTGAGACGTGTCAGATTGG
GTACTACCAGCCCGAGGAGGGGAGCAGCTCCTGCCTGTCCTGCGAGGGGA
ACTACACCACCGCCAGGAGGGGCACGCGCACGCACAAGGACTGCGGAGTG
CTGTGTCAGCCTGGTTATGTGTCAGCCACAGGTCTGGAGGAGTGCTACCC
CTGTCCTGAGGGGTACTACCAGCAGAGTCCAGGCATGTCTGTCTGCAACG
CCTGTTACAAGGGCGGCATTAGACCTGGCAAGGGAGCCAAGAAAGGGGCG
GCTTCCATTTTTGAGTGTCTCGGAAGAGCTGCCTATGTGGACGTTAACGT
GACCCAGTTTGAGTTGGCAGCAGACCTGACGTTTAACGACTGTTTCTCCG
ACCCCTGTGAGAATGGAGGGGACTGCAGGAGCATCAGTGCTGGCTATGTG
TGCGACTGTGTGGCAGGCTACACAGGTGTAAACTGTGAAGTGGAGATTGA
TGAGTGCCTGTCCTCCCCTTGTCTGAACAATGCCGGCAGTTTCTCCCCTG
ATGGACTGGAGCAGTGTGAGACGTGTCAGATTGGGTACTACCAGCCCGAG
GAGGGGAGCAGCTCCTGCCTGTCCTGCGAGGGGAACTACACCACCGCCAG
GAGGGGCACGCGCACGCACAAGGACTGCGGAGTGCTGTGTCAGCCTGGTT
ATGTGTCAGCCACAGGTCTGGAGGAGTGCTACCCCTGTCCTGAGGGGTAC
TACCAGCAGAGTCCAGGCATGTCTGTCTGCAACGCCTGTTACAAGGGCGG
CATTAGACCTGGCAAGGGAGCCAAGAAAGGGGCGGCTTCCATTTTTGAGT
GTCTCGGAAGAGCTGCCTATGTGGACGTTAACGTGACCCAGTTTGAGTTG
GCAGCAGACCTGACGTTTAACGACTGTTTCTCCGACCCCTGTGAGAATGG
AGGGGACTGCAGGAGCATCAGTGCTGGCTATGTGTGCGACTGTGTGGCAG
GCTACACAGGTGTAAACTGTGAAGTGGAGATTGATGAGTGCCTGTCCTCC
CCTTGTCTGAACAATGCCGGCAGTTTCTCCCCTGATGGACTGGAGCAGTG
TGAGACGTGTCAGATTGGGTACTACCAGCCCGAGGAGGGGAGCAGCTCCT
GCCTGTCCTGCGAGGGGAACTACACCACCGCCAGGAGGGGCACGCGCACG
CACAAGGACTGCGGAGTGCTGTGTCAGCCTGGTTATGTGTCAGCCACAGG
TCTGGAGGAGTGCTACCCCTGTCCTGAGGGGTACTACCAGCAGAGTCCAG
GCATGTCTGTCTGCAACGCCTGTTACAAGGGCGGCATTAGACCTGGCAAG
GGAGCCAAGAAAGGGGCGGCTTCCATTTTTGAGTGTCTCGGAAGAGCTGC
CTATGTGGACGTTAACGTGACCCAGTTTGAGTTGGCAGCAGACCTGACGT
TTAACGACTGTTTCTCCGACCCCTGTGAGAATGGAGGGGACTGCAGGAGC
ATCAGTGCTGGCTATGTGTGCGACTGTGTGGCAGGCTACACAGGTGTAAA
CTGTGAAGTGGAGATTGATGAGTGCCTGTCCTCCCCTTGTCTGAACAATG
CCGGCAGTTTCTCCCCTGATGGACTGGAGCAGTGTGAGACGTGTCAGATT
GGGTACTACCAGCCCGAGGAGGGGAGCAGCTCCTGCCTGTCCTGCGAGGG
GAACTACACCACCGCCAGGAGGGGCACGCGCACGCACAAGGACTGCGGAG
TGCTGTGTCAGCCTGGTTATGTGTCAGCCACAGGTCTGGAGGAGTGCTAC
CCCTGTCCTGAGGGGTACTACCAGCAGAGTCCAGGCATGTCTGTCTGCAA
CGCCTGTTACAAGGGCGGCATTAGACCTGGCAAGGGAGCCAAGAAAGGGG
CGGCTTCCATTTTTGAGTGTCTCGGAAGAGCTGCCTATGTGGACGTTAAC
GTGACCCAGTTTGAGTTGGCAGCAGACCTGACGTTTAACGACTGTTTCTC
CGACCCCTGTGAGAATGGAGGGGACTGCAGGAGCATCAGTGCTGGCTATG
TGTGCGACTGTGTGGCAGGCTACACAGGTGTAAACTGTGAAGTGGAGATT
GATGAGTGCCTGTCCTCCCCTTGTCTGAACAATGCC
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000001 | genome | Sc0000001:7094432..7101432 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL97093_cuf8 |
| Biotype | protein_coding |
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