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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL97084_cuf6 >transcript:BL97084_cuf6-protein ID=transcript:BL97084_cuf6-protein|Name=transcript:BL97084_cuf6|organism=Branchiostoma lanceolatum|type=polypeptide|length=263bp
QEDKKQLRKGAITSLNRIPIQTLDGLHQTATAMAQLTKEDTELSGDAQDL
AVSKLTKMTTFLKEKMEDGTASVQVVELTTQALISGLANVVKAAARRTST
AHDHFTPKVFPWSSTVIQQSLQTISTVKQTVLTTIAPGEKPKVLTTPSLA
IMLQRDECRDFRAGAYVQEDFDSLFSVPSCDDLFRNGTIQPDQVIDTHMT
HFSNNPYQWATNISLEDTVVSLEFTSEGQNIAVRNLTEAVDIILPRDDSS
EFWNTVRISGDGT Run BLAST on NCBI mRNA from alignment at Sc0000001:9625642..9627741+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL97084_cuf6 ID=transcript:BL97084_cuf6|Name=transcript:BL97084_cuf6|organism=Branchiostoma lanceolatum|type=mRNA|length=2100bp|location=Sequence derived from alignment at Sc0000001:9625642..9627741+ (Branchiostoma lanceolatum)
CAGGAGGACAAAAAACAGGTAAAAAAACATTACATGGACTGTGACCATCT
GTTACTGTATCCCATGTATGATGGAACACCTGTATCATCGCATCATTTAC
TGTTAAGATTAGGTTTTATCATTCGGTTGATACGATTGCCGTCTTGTCCA
AAACCACCGAGGAATGGGCATCGTTCTAAGAACATCTGAAGTCTTCACAG
CAAGCGTTATCTGACAAAGGTCCCAATCTGCTTTTTGTAAACTGAAATCG
AACTTAATCATAAAGTTGTTAGTTTGCGTACCATCTGGCCTGGTATTGAA
TATAAAAAATACACATGATTGCCAGATACTTATGCCATGAGCGATTCTCA
TTATTTCCTATACGTGAAGAGTTTTTTCAAAGATCCTGCCTACAAGTAAA
GTGTTTTTCGCTCTTCTCCACATCAGCTGCGGAAAGGTGCCATTACCAGT
TTGAATAGGATCCCGATTCAAACACTGGACGGTCTGCATCAAACTGCTAC
CGCCATGGCTCAACTTACCAAAGAGGACACCGAGCTCTCGGGGGACGCAC
AGGTAAAAAAATAAAGACTTGCAATGTAACCAGTGAACTGGGCTGTGAAT
AACAAATCATAAAATACCAATTGTATCCATCACTAGTATCCCTTCCGCTT
GCAACCATGCACTGGATAATACTTTATCTAGTAACGTTTTTGATTTCGTT
ATAACTACACGAGATGTAGTGAGGTCTTGAAAGCACCACTGTACCTAGTT
TTCTAGAGATACGTTTAATTGTAAGTCTAATCATTCAGTCAACATTTGTT
TGATCTCTTCCTCCCTGTTTGCCAGGATCTGGCTGTATCGAAACTTACAA
AAATGACGACATTTCTGAAGGAAAAAATGGAGGATGGAACAGCAAGCGTT
CAGGTAGTAGAGCTTACCACACAGGCTCTAATATCCGGCCTGGCTAATGT
CGTCAAAGCAGCTGCCAGGAGAACCTCAACAGCTCATGACCACTTCACGG
TGGGTACAAAACATGCTGAGCAAGTACTTTAATTCTAATCACAATGGTAA
ACGTGTATATGAGCTATAGGCTACAAGTATAGCGCGACAAGATGAGATGA
TGAGATGTGCTATCGATATAGAATTATGTACACACGTTGAAACGCTATCC
TTGCCAGTTTGGGAGGAAATGATGGCCATTTTTAACACAGGTAGTATAGA
ATGACACTATGTGATAACCTGTCTTTCTCAACGTTATGTTCTGCTAGATA
GGTTCAACGTTTCAAAATCAAACCGGGCAATCTCAAAGGTTGCGTTGAAA
CTTTCCTTATTGGTCAAGAGTAAAGTCCTTAGCATAGTCAGCAATAGCAG
ATTTTGTCTCATTTCAGCCAAAGGTGTTCCCGTGGTCCTCCACTGTCATA
CAACAGTCGCTGCAGACGATATCTACCGTCAAACAAACTGTTCTTACCAC
GATAGCCCCTGGGGAGAAACCCAAGGTACTGACCACCCCAAGCCTCGCTA
TCATGCTGCAGCGAGACGAATGCCGGGATTTCCGCGCAGGCGCATATGTG
CAGGAGGACTTTGATAGTCTGTTCTCAGTACCAAGTTGTGATGACCTGTT
CAGGAACGGCACCATCCAACCAGACCAGGTCATCGATACGCATGTAAGTT
TCTTACTTGCACGTATAAGCTATGCTTGAAAAGCAAAAACTGTTAATTTT
CGTACATTGACAAGCATTCGTCTTGTCTTGGGCACAAACGGTTACTTCGT
ATCAGGCAATGGTAATCTTCGTCATGAGACAAATCTCTATGTTTGACAGC
TTCCAAATTCTGTCAAAACAGGAATAAAATTTTGACATAAAACTCTAGTT
TTTATAACGCTTTTGTTTCATATGATGATATTCTTATATCATGTCTGCTT
GTTAGATGACGCACTTCAGCAATAACCCTTATCAGTGGGCTACTAACATA
AGTCTGGAGGATACCGTTGTATCATTGGAGTTCACATCTGAAGGCCAGAA
TATCGCTGTACGGAACCTAACAGAAGCAGTTGACATCATCCTGCCTCGGG
ACGATAGCTCCGAGTTCTGGAACACGGTTCGGATATCAGGGGATGGTACC
Coding sequence (CDS) from alignment at Sc0000001:9625642..9627741+ >transcript:BL97084_cuf6 ID=transcript:BL97084_cuf6|Name=transcript:BL97084_cuf6|organism=Branchiostoma lanceolatum|type=CDS|length=3945bp|location=Sequence derived from alignment at Sc0000001:9625642..9627741+ (Branchiostoma lanceolatum)
CAGGAGGACAAAAAACAGCTGCGGAAAGGTGCCATTACCAGTTTGAATAG
GATCCCGATTCAAACACTGGACGGTCTGCATCAAACTGCTACCGCCATGG
CTCAACTTACCAAAGAGGACACCGAGCTCTCGGGGGACGCACAGGATCTG
GCTGTATCGAAACTTACAAAAATGACGACATTTCTGAAGGAAAAAATGGA
GGATGGAACAGCAAGCGTTCAGGTAGTAGAGCTTACCACACAGGCTCTAA
TATCCGGCCTGGCTAATGTCGTCAAAGCAGCTGCCAGGAGAACCTCAACA
GCTCATGACCACTTCACGCCAAAGGTGTTCCCGTGGTCCTCCACTGTCAT
ACAACAGTCGCTGCAGACGATATCTACCGTCAAACAAACTGTTCTTACCA
CGATAGCCCCTGGGGAGAAACCCAAGGTACTGACCACCCCAAGCCTCGCT
ATCATGCTGCAGCGAGACGAATGCCGGGATTTCCGCGCAGGCGCATATGT
GCAGGAGGACTTTGATAGTCTGTTCTCAGTACCAAGTTGTGATGACCTGT
TCAGGAACGGCACCATCCAACCAGACCAGGTCATCGATACGCATATGACG
CACTTCAGCAATAACCCTTATCAGTGGGCTACTAACATAAGTCTGGAGGA
TACCGTTGTATCATTGGAGTTCACATCTGAAGGCCAGAATATCGCTGTAC
GGAACCTAACAGAAGCAGTTGACATCATCCTGCCTCGGGACGATAGCTCC
GAGTTCTGGAACACGGTTCGGATATCAGGGGATGGTACCCAGGAGGACAA
AAAACAGCTGCGGAAAGGTGCCATTACCAGTTTGAATAGGATCCCGATTC
AAACACTGGACGGTCTGCATCAAACTGCTACCGCCATGGCTCAACTTACC
AAAGAGGACACCGAGCTCTCGGGGGACGCACAGGATCTGGCTGTATCGAA
ACTTACAAAAATGACGACATTTCTGAAGGAAAAAATGGAGGATGGAACAG
CAAGCGTTCAGGTAGTAGAGCTTACCACACAGGCTCTAATATCCGGCCTG
GCTAATGTCGTCAAAGCAGCTGCCAGGAGAACCTCAACAGCTCATGACCA
CTTCACGCCAAAGGTGTTCCCGTGGTCCTCCACTGTCATACAACAGTCGC
TGCAGACGATATCTACCGTCAAACAAACTGTTCTTACCACGATAGCCCCT
GGGGAGAAACCCAAGGTACTGACCACCCCAAGCCTCGCTATCATGCTGCA
GCGAGACGAATGCCGGGATTTCCGCGCAGGCGCATATGTGCAGGAGGACT
TTGATAGTCTGTTCTCAGTACCAAGTTGTGATGACCTGTTCAGGAACGGC
ACCATCCAACCAGACCAGGTCATCGATACGCATATGACGCACTTCAGCAA
TAACCCTTATCAGTGGGCTACTAACATAAGTCTGGAGGATACCGTTGTAT
CATTGGAGTTCACATCTGAAGGCCAGAATATCGCTGTACGGAACCTAACA
GAAGCAGTTGACATCATCCTGCCTCGGGACGATAGCTCCGAGTTCTGGAA
CACGGTTCGGATATCAGGGGATGGTACCCAGGAGGACAAAAAACAGCTGC
GGAAAGGTGCCATTACCAGTTTGAATAGGATCCCGATTCAAACACTGGAC
GGTCTGCATCAAACTGCTACCGCCATGGCTCAACTTACCAAAGAGGACAC
CGAGCTCTCGGGGGACGCACAGGATCTGGCTGTATCGAAACTTACAAAAA
TGACGACATTTCTGAAGGAAAAAATGGAGGATGGAACAGCAAGCGTTCAG
GTAGTAGAGCTTACCACACAGGCTCTAATATCCGGCCTGGCTAATGTCGT
CAAAGCAGCTGCCAGGAGAACCTCAACAGCTCATGACCACTTCACGCCAA
AGGTGTTCCCGTGGTCCTCCACTGTCATACAACAGTCGCTGCAGACGATA
TCTACCGTCAAACAAACTGTTCTTACCACGATAGCCCCTGGGGAGAAACC
CAAGGTACTGACCACCCCAAGCCTCGCTATCATGCTGCAGCGAGACGAAT
GCCGGGATTTCCGCGCAGGCGCATATGTGCAGGAGGACTTTGATAGTCTG
TTCTCAGTACCAAGTTGTGATGACCTGTTCAGGAACGGCACCATCCAACC
AGACCAGGTCATCGATACGCATATGACGCACTTCAGCAATAACCCTTATC
AGTGGGCTACTAACATAAGTCTGGAGGATACCGTTGTATCATTGGAGTTC
ACATCTGAAGGCCAGAATATCGCTGTACGGAACCTAACAGAAGCAGTTGA
CATCATCCTGCCTCGGGACGATAGCTCCGAGTTCTGGAACACGGTTCGGA
TATCAGGGGATGGTACCCAGGAGGACAAAAAACAGCTGCGGAAAGGTGCC
ATTACCAGTTTGAATAGGATCCCGATTCAAACACTGGACGGTCTGCATCA
AACTGCTACCGCCATGGCTCAACTTACCAAAGAGGACACCGAGCTCTCGG
GGGACGCACAGGATCTGGCTGTATCGAAACTTACAAAAATGACGACATTT
CTGAAGGAAAAAATGGAGGATGGAACAGCAAGCGTTCAGGTAGTAGAGCT
TACCACACAGGCTCTAATATCCGGCCTGGCTAATGTCGTCAAAGCAGCTG
CCAGGAGAACCTCAACAGCTCATGACCACTTCACGCCAAAGGTGTTCCCG
TGGTCCTCCACTGTCATACAACAGTCGCTGCAGACGATATCTACCGTCAA
ACAAACTGTTCTTACCACGATAGCCCCTGGGGAGAAACCCAAGGTACTGA
CCACCCCAAGCCTCGCTATCATGCTGCAGCGAGACGAATGCCGGGATTTC
CGCGCAGGCGCATATGTGCAGGAGGACTTTGATAGTCTGTTCTCAGTACC
AAGTTGTGATGACCTGTTCAGGAACGGCACCATCCAACCAGACCAGGTCA
TCGATACGCATATGACGCACTTCAGCAATAACCCTTATCAGTGGGCTACT
AACATAAGTCTGGAGGATACCGTTGTATCATTGGAGTTCACATCTGAAGG
CCAGAATATCGCTGTACGGAACCTAACAGAAGCAGTTGACATCATCCTGC
CTCGGGACGATAGCTCCGAGTTCTGGAACACGGTTCGGATATCAGGGGAT
GGTACCCAGGAGGACAAAAAACAGCTGCGGAAAGGTGCCATTACCAGTTT
GAATAGGATCCCGATTCAAACACTGGACGGTCTGCATCAAACTGCTACCG
CCATGGCTCAACTTACCAAAGAGGACACCGAGCTCTCGGGGGACGCACAG
GATCTGGCTGTATCGAAACTTACAAAAATGACGACATTTCTGAAGGAAAA
AATGGAGGATGGAACAGCAAGCGTTCAGGTAGTAGAGCTTACCACACAGG
CTCTAATATCCGGCCTGGCTAATGTCGTCAAAGCAGCTGCCAGGAGAACC
TCAACAGCTCATGACCACTTCACGCCAAAGGTGTTCCCGTGGTCCTCCAC
TGTCATACAACAGTCGCTGCAGACGATATCTACCGTCAAACAAACTGTTC
TTACCACGATAGCCCCTGGGGAGAAACCCAAGGTACTGACCACCCCAAGC
CTCGCTATCATGCTGCAGCGAGACGAATGCCGGGATTTCCGCGCAGGCGC
ATATGTGCAGGAGGACTTTGATAGTCTGTTCTCAGTACCAAGTTGTGATG
ACCTGTTCAGGAACGGCACCATCCAACCAGACCAGGTCATCGATACGCAT
ATGACGCACTTCAGCAATAACCCTTATCAGTGGGCTACTAACATAAGTCT
GGAGGATACCGTTGTATCATTGGAGTTCACATCTGAAGGCCAGAATATCG
CTGTACGGAACCTAACAGAAGCAGTTGACATCATCCTGCCTCGGGACGAT
AGCTCCGAGTTCTGGAACACGGTTCGGATATCAGGGGATGGTACC
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000001 | genome | Sc0000001:9625642..9627741 + |
Properties
| Property Name | Value |
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| Transcript id | BL97084_cuf6 |
| Biotype | protein_coding |
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