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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL97083_cuf5 >transcript:BL97083_cuf5-protein ID=transcript:BL97083_cuf5-protein|Name=transcript:BL97083_cuf5|organism=Branchiostoma lanceolatum|type=polypeptide|length=294bp
KSWPVTNNTNPVLFIPGGTLDGGTTYVFRVTVSKPGRQVGGHAEKTVAMV
EGTPPALEGISCVQNCQQYLNPSERLVLKAKCTDCTPESRLQYYWSLVNN
PVNSKQWIDWDTDTLTGRQKTYLSIHKDTFKSGAGTETYTIRLDASDKRG
ESTYALYSFITNVPPTLGTCTVVPDTGTVMETLFQVTCSGFSDVNLPLIY
RFAAISGAATSTEAWKQGTMVYYGTDSTSSPLYLPVGDKDNDFVVTIAIR
ATDSIGESTETTTTATVLEGEMKENVSTVITTTESTVDTLLKAG Run BLAST on NCBI mRNA from alignment at Sc0000001:9623630..9625523+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL97083_cuf5 ID=transcript:BL97083_cuf5|Name=transcript:BL97083_cuf5|organism=Branchiostoma lanceolatum|type=mRNA|length=1894bp|location=Sequence derived from alignment at Sc0000001:9623630..9625523+ (Branchiostoma lanceolatum)
GGAAAAGCTGGCCAGTGACGAACAACACGAATCCTGTACTGTTCATCCCA
GGAGGGACTCTAGATGGTGAGAAAAAGTTCATAGATAGACAGGGAACAAC
TTATCAATGATGTCATTCTGATTTCATGATCCATGCGGTGCTGTTGGGAA
CGATCAAGATAGATAAATAGACATATGATATTATATGACTTCTTCTTATA
TATTTGTACAGTTAAACGTAGTAGCTTTAACTTTTCAACATGCTTCTGTT
TTAGGGGGAACAACGTACGTATTTCGGGTAACAGTTTCAAAGCCCGGTCG
ACAAGTCGGCGGCCACGCAGAAAAGACAGTCGCCATGGTGGAAGGCACTC
CCCCCGCCCTGGAAGGAATCTCGTAAGCACCATTAACGTAAAATCCATTG
AAACTTTTTATCCTGTACTTCAAAACATACAATCACCAGATTTTGTACCG
AACGTACGATACTTTTCACAAAGAACGTCCCAGTAATGAGCAAAAACATT
GATTTTGAAAGTTTAAAAACCAATTTTCAAACGTTTTATTATTTCAGGTG
TGTGCAGAATTGTCAACAGTATTTGAATCCATCGGAACGTTTAGTTCTAA
AGGCCAAGTGCACCGACTGCACTCCCGAAAGTCGTCTTCAGTACTACTGG
AGTTTAGTCAACAACCCTGTAAACAGTAAACAATGGATAGACTGGGACAC
AGACACACTCACGGGCAGACAGAAGACATACCTGTCTATACACAAAGACA
CGTTTAAGAGTGGAGCTGGTACAGAAACCTACACCATACGACTCGACGGT
AGGTGGTACGTCTGTAATAGAAATCCTCAAATACCTTATCGAAACCATAT
TTAACCCAATGAGTTGCTCAGCTTGAAGCTGCGATGTTCTGTGACATAAC
AACGAATCTTTCAAATAAGATTTTCCGTCCCTTTTCTTAATCATTGTACC
TGGCTTAGTCTTCTTGTTCCTGATTTTAAAGGCATAATAAACGTTAAGGC
ACATTTTATTCCTGCTTAACCTTTAACCTACTAGTATGATAGAAAATAAG
ATTACTGGTCCATTTTACTTTGTTTTGACGAGTGGTTTAATGCATCAATT
TTTATCTTTGCTGACTTAAACAGCGTCTGACAAAAGAGGAGAGTCTACAT
ACGCACTGTACAGCTTCATAACCAATGTACCACCAACCCTGGGAACGTGC
ACAGTCGTCCCGGACACTGGGACCGTGATGGAGACGTTGTTTCAGGTCAC
GTGTTCAGGATTTTCGGACGTGAACCTGCCGCTCATATACAGGTTTGCAG
CTATTTCTGGTGCTGCTACCTCAACAGAGGCCTGGAAACAAGGTAAAGCT
ACACCTAGATTATGACAACCTAAATATCTTACAACAATATGTAGTAGCTT
ATTCACCAGTACTTGATGTCCCTAAGTTTTTCTCAGACTGCCAAACTGTT
GCATGCCAGTTCAACACATACCAGCAAACACCTGTGCTAGGTACAATGGT
CTACTACGGTACGGACAGCACCTCTTCACCGTTGTATCTGCCTGTCGGGG
ACAAAGACAACGACTTTGTGGTCACCATTGCCATCCGTGCCACTGACTCT
ATTGGAGAAAGTACGGAGACCACGACAACCGCAACGGTGATGCGATAATC
TTTCACCATTTCTAGGATTGGCACGAGGACTATCTCATGTTCTAGAATTA
TGTTTTAAAAACACAGAATTGTAAAAGATCCTTCACATTTGTGACAAATA
ACATCAGTAAATCATCTGAAATAACTCAAGTGATGTCTGTTGCTGCATTC
TGTCGTTAGGTTTTAGAGGGAGAAATGAAGGAAAATGTATCAACCGTTAT
CACCACCACGGAATCAACAGTTGATACGTTACTGAAGGCGGGCA Coding sequence (CDS) from alignment at Sc0000001:9623630..9625523+ >transcript:BL97083_cuf5 ID=transcript:BL97083_cuf5|Name=transcript:BL97083_cuf5|organism=Branchiostoma lanceolatum|type=CDS|length=5292bp|location=Sequence derived from alignment at Sc0000001:9623630..9625523+ (Branchiostoma lanceolatum)
AAAAGCTGGCCAGTGACGAACAACACGAATCCTGTACTGTTCATCCCAGG
AGGGACTCTAGATGGGGGAACAACGTACGTATTTCGGGTAACAGTTTCAA
AGCCCGGTCGACAAGTCGGCGGCCACGCAGAAAAGACAGTCGCCATGGTG
GAAGGCACTCCCCCCGCCCTGGAAGGAATCTCGTGTGTGCAGAATTGTCA
ACAGTATTTGAATCCATCGGAACGTTTAGTTCTAAAGGCCAAGTGCACCG
ACTGCACTCCCGAAAGTCGTCTTCAGTACTACTGGAGTTTAGTCAACAAC
CCTGTAAACAGTAAACAATGGATAGACTGGGACACAGACACACTCACGGG
CAGACAGAAGACATACCTGTCTATACACAAAGACACGTTTAAGAGTGGAG
CTGGTACAGAAACCTACACCATACGACTCGACGCGTCTGACAAAAGAGGA
GAGTCTACATACGCACTGTACAGCTTCATAACCAATGTACCACCAACCCT
GGGAACGTGCACAGTCGTCCCGGACACTGGGACCGTGATGGAGACGTTGT
TTCAGGTCACGTGTTCAGGATTTTCGGACGTGAACCTGCCGCTCATATAC
AGGTTTGCAGCTATTTCTGGTGCTGCTACCTCAACAGAGGCCTGGAAACA
AGGTACAATGGTCTACTACGGTACGGACAGCACCTCTTCACCGTTGTATC
TGCCTGTCGGGGACAAAGACAACGACTTTGTGGTCACCATTGCCATCCGT
GCCACTGACTCTATTGGAGAAAGTACGGAGACCACGACAACCGCAACGGT
TTTAGAGGGAGAAATGAAGGAAAATGTATCAACCGTTATCACCACCACGG
AATCAACAGTTGATACGTTACTGAAGGCGGGCAAAAGCTGGCCAGTGACG
AACAACACGAATCCTGTACTGTTCATCCCAGGAGGGACTCTAGATGGGGG
AACAACGTACGTATTTCGGGTAACAGTTTCAAAGCCCGGTCGACAAGTCG
GCGGCCACGCAGAAAAGACAGTCGCCATGGTGGAAGGCACTCCCCCCGCC
CTGGAAGGAATCTCGTGTGTGCAGAATTGTCAACAGTATTTGAATCCATC
GGAACGTTTAGTTCTAAAGGCCAAGTGCACCGACTGCACTCCCGAAAGTC
GTCTTCAGTACTACTGGAGTTTAGTCAACAACCCTGTAAACAGTAAACAA
TGGATAGACTGGGACACAGACACACTCACGGGCAGACAGAAGACATACCT
GTCTATACACAAAGACACGTTTAAGAGTGGAGCTGGTACAGAAACCTACA
CCATACGACTCGACGCGTCTGACAAAAGAGGAGAGTCTACATACGCACTG
TACAGCTTCATAACCAATGTACCACCAACCCTGGGAACGTGCACAGTCGT
CCCGGACACTGGGACCGTGATGGAGACGTTGTTTCAGGTCACGTGTTCAG
GATTTTCGGACGTGAACCTGCCGCTCATATACAGGTTTGCAGCTATTTCT
GGTGCTGCTACCTCAACAGAGGCCTGGAAACAAGGTACAATGGTCTACTA
CGGTACGGACAGCACCTCTTCACCGTTGTATCTGCCTGTCGGGGACAAAG
ACAACGACTTTGTGGTCACCATTGCCATCCGTGCCACTGACTCTATTGGA
GAAAGTACGGAGACCACGACAACCGCAACGGTTTTAGAGGGAGAAATGAA
GGAAAATGTATCAACCGTTATCACCACCACGGAATCAACAGTTGATACGT
TACTGAAGGCGGGCAAAAGCTGGCCAGTGACGAACAACACGAATCCTGTA
CTGTTCATCCCAGGAGGGACTCTAGATGGGGGAACAACGTACGTATTTCG
GGTAACAGTTTCAAAGCCCGGTCGACAAGTCGGCGGCCACGCAGAAAAGA
CAGTCGCCATGGTGGAAGGCACTCCCCCCGCCCTGGAAGGAATCTCGTGT
GTGCAGAATTGTCAACAGTATTTGAATCCATCGGAACGTTTAGTTCTAAA
GGCCAAGTGCACCGACTGCACTCCCGAAAGTCGTCTTCAGTACTACTGGA
GTTTAGTCAACAACCCTGTAAACAGTAAACAATGGATAGACTGGGACACA
GACACACTCACGGGCAGACAGAAGACATACCTGTCTATACACAAAGACAC
GTTTAAGAGTGGAGCTGGTACAGAAACCTACACCATACGACTCGACGCGT
CTGACAAAAGAGGAGAGTCTACATACGCACTGTACAGCTTCATAACCAAT
GTACCACCAACCCTGGGAACGTGCACAGTCGTCCCGGACACTGGGACCGT
GATGGAGACGTTGTTTCAGGTCACGTGTTCAGGATTTTCGGACGTGAACC
TGCCGCTCATATACAGGTTTGCAGCTATTTCTGGTGCTGCTACCTCAACA
GAGGCCTGGAAACAAGGTACAATGGTCTACTACGGTACGGACAGCACCTC
TTCACCGTTGTATCTGCCTGTCGGGGACAAAGACAACGACTTTGTGGTCA
CCATTGCCATCCGTGCCACTGACTCTATTGGAGAAAGTACGGAGACCACG
ACAACCGCAACGGTTTTAGAGGGAGAAATGAAGGAAAATGTATCAACCGT
TATCACCACCACGGAATCAACAGTTGATACGTTACTGAAGGCGGGCAAAA
GCTGGCCAGTGACGAACAACACGAATCCTGTACTGTTCATCCCAGGAGGG
ACTCTAGATGGGGGAACAACGTACGTATTTCGGGTAACAGTTTCAAAGCC
CGGTCGACAAGTCGGCGGCCACGCAGAAAAGACAGTCGCCATGGTGGAAG
GCACTCCCCCCGCCCTGGAAGGAATCTCGTGTGTGCAGAATTGTCAACAG
TATTTGAATCCATCGGAACGTTTAGTTCTAAAGGCCAAGTGCACCGACTG
CACTCCCGAAAGTCGTCTTCAGTACTACTGGAGTTTAGTCAACAACCCTG
TAAACAGTAAACAATGGATAGACTGGGACACAGACACACTCACGGGCAGA
CAGAAGACATACCTGTCTATACACAAAGACACGTTTAAGAGTGGAGCTGG
TACAGAAACCTACACCATACGACTCGACGCGTCTGACAAAAGAGGAGAGT
CTACATACGCACTGTACAGCTTCATAACCAATGTACCACCAACCCTGGGA
ACGTGCACAGTCGTCCCGGACACTGGGACCGTGATGGAGACGTTGTTTCA
GGTCACGTGTTCAGGATTTTCGGACGTGAACCTGCCGCTCATATACAGGT
TTGCAGCTATTTCTGGTGCTGCTACCTCAACAGAGGCCTGGAAACAAGGT
ACAATGGTCTACTACGGTACGGACAGCACCTCTTCACCGTTGTATCTGCC
TGTCGGGGACAAAGACAACGACTTTGTGGTCACCATTGCCATCCGTGCCA
CTGACTCTATTGGAGAAAGTACGGAGACCACGACAACCGCAACGGTTTTA
GAGGGAGAAATGAAGGAAAATGTATCAACCGTTATCACCACCACGGAATC
AACAGTTGATACGTTACTGAAGGCGGGCAAAAGCTGGCCAGTGACGAACA
ACACGAATCCTGTACTGTTCATCCCAGGAGGGACTCTAGATGGGGGAACA
ACGTACGTATTTCGGGTAACAGTTTCAAAGCCCGGTCGACAAGTCGGCGG
CCACGCAGAAAAGACAGTCGCCATGGTGGAAGGCACTCCCCCCGCCCTGG
AAGGAATCTCGTGTGTGCAGAATTGTCAACAGTATTTGAATCCATCGGAA
CGTTTAGTTCTAAAGGCCAAGTGCACCGACTGCACTCCCGAAAGTCGTCT
TCAGTACTACTGGAGTTTAGTCAACAACCCTGTAAACAGTAAACAATGGA
TAGACTGGGACACAGACACACTCACGGGCAGACAGAAGACATACCTGTCT
ATACACAAAGACACGTTTAAGAGTGGAGCTGGTACAGAAACCTACACCAT
ACGACTCGACGCGTCTGACAAAAGAGGAGAGTCTACATACGCACTGTACA
GCTTCATAACCAATGTACCACCAACCCTGGGAACGTGCACAGTCGTCCCG
GACACTGGGACCGTGATGGAGACGTTGTTTCAGGTCACGTGTTCAGGATT
TTCGGACGTGAACCTGCCGCTCATATACAGGTTTGCAGCTATTTCTGGTG
CTGCTACCTCAACAGAGGCCTGGAAACAAGGTACAATGGTCTACTACGGT
ACGGACAGCACCTCTTCACCGTTGTATCTGCCTGTCGGGGACAAAGACAA
CGACTTTGTGGTCACCATTGCCATCCGTGCCACTGACTCTATTGGAGAAA
GTACGGAGACCACGACAACCGCAACGGTTTTAGAGGGAGAAATGAAGGAA
AATGTATCAACCGTTATCACCACCACGGAATCAACAGTTGATACGTTACT
GAAGGCGGGCAAAAGCTGGCCAGTGACGAACAACACGAATCCTGTACTGT
TCATCCCAGGAGGGACTCTAGATGGGGGAACAACGTACGTATTTCGGGTA
ACAGTTTCAAAGCCCGGTCGACAAGTCGGCGGCCACGCAGAAAAGACAGT
CGCCATGGTGGAAGGCACTCCCCCCGCCCTGGAAGGAATCTCGTGTGTGC
AGAATTGTCAACAGTATTTGAATCCATCGGAACGTTTAGTTCTAAAGGCC
AAGTGCACCGACTGCACTCCCGAAAGTCGTCTTCAGTACTACTGGAGTTT
AGTCAACAACCCTGTAAACAGTAAACAATGGATAGACTGGGACACAGACA
CACTCACGGGCAGACAGAAGACATACCTGTCTATACACAAAGACACGTTT
AAGAGTGGAGCTGGTACAGAAACCTACACCATACGACTCGACGCGTCTGA
CAAAAGAGGAGAGTCTACATACGCACTGTACAGCTTCATAACCAATGTAC
CACCAACCCTGGGAACGTGCACAGTCGTCCCGGACACTGGGACCGTGATG
GAGACGTTGTTTCAGGTCACGTGTTCAGGATTTTCGGACGTGAACCTGCC
GCTCATATACAGGTTTGCAGCTATTTCTGGTGCTGCTACCTCAACAGAGG
CCTGGAAACAAGGTACAATGGTCTACTACGGTACGGACAGCACCTCTTCA
CCGTTGTATCTGCCTGTCGGGGACAAAGACAACGACTTTGTGGTCACCAT
TGCCATCCGTGCCACTGACTCTATTGGAGAAAGTACGGAGACCACGACAA
CCGCAACGGTTTTAGAGGGAGAAATGAAGGAAAATGTATCAACCGTTATC
ACCACCACGGAATCAACAGTTGATACGTTACTGAAGGCGGGC
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| Sc0000001 | genome | Sc0000001:9623630..9625523 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL97083_cuf5 |
| Biotype | protein_coding |
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