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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL97078_cuf7 >transcript:BL97078_cuf7-protein ID=transcript:BL97078_cuf7-protein|Name=transcript:BL97078_cuf7|organism=Branchiostoma lanceolatum|type=polypeptide|length=193bp
MMWETGSKTIVMVTNLKEKNKQKCTQYWPDSGKQTYGDIDVTLVDTIPMV DLATRIFLVTKDGVHGRRQVTQFHFLGWPDYGLPRSPMGLLKFHRTVVTK TTSNDTPIVVHCSAGVGRTGTFITIDAMLEMMQTEEKVDVFGFVSRMRQN RSNMVQTEAQYVFIYRALLEQYLYGDTEVEVANIQRRMHKLRT Run BLAST on NCBI mRNA from alignment at Sc0000001:7646532..7648550+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL97078_cuf7 ID=transcript:BL97078_cuf7|Name=transcript:BL97078_cuf7|organism=Branchiostoma lanceolatum|type=mRNA|length=2019bp|location=Sequence derived from alignment at Sc0000001:7646532..7648550+ (Branchiostoma lanceolatum) GTAATATAAAGGCATGCCAGGCTTATGTCTTTAGGTATTGTCTACGATTT
ACGTTGTTGATTTTGTCAGTTTGCTGCATTGATAGAATAAGGTTGTTGCA
CACATTTCGAACTTCAATAATATACTGGCACTAGTATCCTAAACAGATTC
ATATTTGTCACAAGCAGACTTTTTGTAGATATACTTTCAATGATATGCCA
ACATGGTGAATCCTAACAGGGCTACAGTGTTGCGAGAAAATTCATCGCTG
CACAAGGTAAGAGCTGACCGCTACATCGCACATTGACAGTTTTCTCTCGA
ATTATGATTCCTCATAGATATGCAGTACCTATACACTGACTTACATTTCA
TATTTTTCATTCATCTAAGACGACTATAGCCCATTTACGGTACTTAAAAA
TGAGACATTTCACCCCTTGAAATCATCATAAAACATAACTTACGCGCATT
TCTATACTTTAAACTGTAGGTCCCCTGCCTAATACTGTGGGTGATTTCTG
GAGGATGATGTGGGAAACCGGGTCAAAAACCATCGTCATGGTGACCAATC
TGAAGGAGAAAAACAAGGTACTCACAAGTCCCCTCTTACAGTATCTTCAA
CTTTTCTACAGTTAATCAACATGAATATCAATGGTATATTTTTGTGTTTT
ATCTTAGCAACTGATAAATCAGCAAGGTCCATCTCATCACTAATCAATTA
CAGGACTTGTGATGTCTGAAAGAATCTGTAACGTTACTTTAGATACTTTC
GAGTCATTAAGCCACCATTAATAGCCGACGTTTATGTTTTGAATATGTAA
TTTTTACCTTCACAGCAAAAGTGTACACAGTACTGGCCGGACAGTGGGAA
GCAGACTTATGGAGACATTGACGTCACCTTGGTTGACACCATCCCGATGG
TGGATCTAGCGACAAGGATATTTCTGGTTACAAAGGTGACTGCAAAAATG
TATTATTTTAGAAGCAAATAAATTACAGATGATTTGACATTTTTTTAAAT
TCTACATCGTAAGGCCAGACCAAAGATTTTAAACCTAACAATTCACCCAG
TAATTTGAATTAAAAAAAGTAGCAATACATCTACAATGAACGTAGTCGTA
GGTTCATCTGGTTTGAGAATTCATATTTCCTGTCTCCGAAGAACTCTTGA
AAACTGACGTCTTCCGAATATGCCACTGCCCAGGATGTTCTTGACTCTAT
ATGATGAACAATCGTTGGTATTAGGACCATGGGATATCTGATATCAACTT
CAATTCCGTCTCACCACTATAAACACACAGGATGGTGTCCATGGACGACG
TCAGGTGACCCAGTTCCACTTCCTCGGCTGGCCGGACTACGGGCTGCCCC
GGAGCCCCATGGGATTGCTGAAGTTCCACAGGACAGTGGTTACTAAGACA
ACCAGCAATGACACACCCATCGTTGTTCACTGCAGGTAGAAAGCACAATG
AGATGGTGTAAGAAAATTAATCTAGTAACGGCCCTATATGGTAATTGTTG
TGTATAATTGTATTGAAGAGAGAAGAGTCTTGAAAATGGTGTAGGGATGT
ATCGCTATCCTTAAGATTCTATACAGCCATTTTCTCCCAATGTCCTTTGC
ATTTTTTATCGCTATTGGTTCTGAATCTGGAAGATACATGATAACACAAT
GTCTATTCTGCAGTGCTGGTGTTGGCCGCACGGGCACGTTCATCACCATA
GACGCCATGTTGGAGATGATGCAGACTGAAGAGAAAGTGGACGTGTTCGG
GTTTGTGTCCAGGATGCGGCAGAACAGGAGCAACATGGTTCAGACAGAGG
TACGCATATCACCAAAGAAATCCTCCCGACCTGCAGTTAATTGTACATGA
TATCAAATTGATATAAAATTTTATTTCTACATATAAAAATCCAATTATCT
TGAACATCTCTAGGCCCAGTACGTGTTCATCTACCGAGCCTTACTGGAAC
AGTACCTGTATGGAGACACGGAGGTGGAGGTGGCCAACATCCAGCGCCGC
ATGCACAAACTCAGGACCG Coding sequence (CDS) from alignment at Sc0000001:7646532..7648550+ >transcript:BL97078_cuf7 ID=transcript:BL97078_cuf7|Name=transcript:BL97078_cuf7|organism=Branchiostoma lanceolatum|type=CDS|length=2895bp|location=Sequence derived from alignment at Sc0000001:7646532..7648550+ (Branchiostoma lanceolatum) ATGATGTGGGAAACCGGGTCAAAAACCATCGTCATGGTGACCAATCTGAA GGAGAAAAACAAGCAAAAGTGTACACAGTACTGGCCGGACAGTGGGAAGC AGACTTATGGAGACATTGACGTCACCTTGGTTGACACCATCCCGATGGTG GATCTAGCGACAAGGATATTTCTGGTTACAAAGGATGGTGTCCATGGACG ACGTCAGGTGACCCAGTTCCACTTCCTCGGCTGGCCGGACTACGGGCTGC CCCGGAGCCCCATGGGATTGCTGAAGTTCCACAGGACAGTGGTTACTAAG ACAACCAGCAATGACACACCCATCGTTGTTCACTGCAGTGCTGGTGTTGG CCGCACGGGCACGTTCATCACCATAGACGCCATGTTGGAGATGATGCAGA CTGAAGAGAAAGTGGACGTGTTCGGGTTTGTGTCCAGGATGCGGCAGAAC AGGAGCAACATGGTTCAGACAGAGGCCCAGTACGTGTTCATCTACCGAGC CTTACTGGAACAGTACCTGTATGGAGACACGGAGGTGGAGGTGGCCAACA TCCAGCGCCGCATGCACAAACTCAGGACCATGATGTGGGAAACCGGGTCA AAAACCATCGTCATGGTGACCAATCTGAAGGAGAAAAACAAGCAAAAGTG TACACAGTACTGGCCGGACAGTGGGAAGCAGACTTATGGAGACATTGACG TCACCTTGGTTGACACCATCCCGATGGTGGATCTAGCGACAAGGATATTT CTGGTTACAAAGGATGGTGTCCATGGACGACGTCAGGTGACCCAGTTCCA CTTCCTCGGCTGGCCGGACTACGGGCTGCCCCGGAGCCCCATGGGATTGC TGAAGTTCCACAGGACAGTGGTTACTAAGACAACCAGCAATGACACACCC ATCGTTGTTCACTGCAGTGCTGGTGTTGGCCGCACGGGCACGTTCATCAC CATAGACGCCATGTTGGAGATGATGCAGACTGAAGAGAAAGTGGACGTGT TCGGGTTTGTGTCCAGGATGCGGCAGAACAGGAGCAACATGGTTCAGACA GAGGCCCAGTACGTGTTCATCTACCGAGCCTTACTGGAACAGTACCTGTA TGGAGACACGGAGGTGGAGGTGGCCAACATCCAGCGCCGCATGCACAAAC TCAGGACCATGATGTGGGAAACCGGGTCAAAAACCATCGTCATGGTGACC AATCTGAAGGAGAAAAACAAGCAAAAGTGTACACAGTACTGGCCGGACAG TGGGAAGCAGACTTATGGAGACATTGACGTCACCTTGGTTGACACCATCC CGATGGTGGATCTAGCGACAAGGATATTTCTGGTTACAAAGGATGGTGTC CATGGACGACGTCAGGTGACCCAGTTCCACTTCCTCGGCTGGCCGGACTA CGGGCTGCCCCGGAGCCCCATGGGATTGCTGAAGTTCCACAGGACAGTGG TTACTAAGACAACCAGCAATGACACACCCATCGTTGTTCACTGCAGTGCT GGTGTTGGCCGCACGGGCACGTTCATCACCATAGACGCCATGTTGGAGAT GATGCAGACTGAAGAGAAAGTGGACGTGTTCGGGTTTGTGTCCAGGATGC GGCAGAACAGGAGCAACATGGTTCAGACAGAGGCCCAGTACGTGTTCATC TACCGAGCCTTACTGGAACAGTACCTGTATGGAGACACGGAGGTGGAGGT GGCCAACATCCAGCGCCGCATGCACAAACTCAGGACCATGATGTGGGAAA CCGGGTCAAAAACCATCGTCATGGTGACCAATCTGAAGGAGAAAAACAAG CAAAAGTGTACACAGTACTGGCCGGACAGTGGGAAGCAGACTTATGGAGA CATTGACGTCACCTTGGTTGACACCATCCCGATGGTGGATCTAGCGACAA GGATATTTCTGGTTACAAAGGATGGTGTCCATGGACGACGTCAGGTGACC CAGTTCCACTTCCTCGGCTGGCCGGACTACGGGCTGCCCCGGAGCCCCAT GGGATTGCTGAAGTTCCACAGGACAGTGGTTACTAAGACAACCAGCAATG ACACACCCATCGTTGTTCACTGCAGTGCTGGTGTTGGCCGCACGGGCACG TTCATCACCATAGACGCCATGTTGGAGATGATGCAGACTGAAGAGAAAGT GGACGTGTTCGGGTTTGTGTCCAGGATGCGGCAGAACAGGAGCAACATGG TTCAGACAGAGGCCCAGTACGTGTTCATCTACCGAGCCTTACTGGAACAG TACCTGTATGGAGACACGGAGGTGGAGGTGGCCAACATCCAGCGCCGCAT GCACAAACTCAGGACCATGATGTGGGAAACCGGGTCAAAAACCATCGTCA TGGTGACCAATCTGAAGGAGAAAAACAAGCAAAAGTGTACACAGTACTGG CCGGACAGTGGGAAGCAGACTTATGGAGACATTGACGTCACCTTGGTTGA CACCATCCCGATGGTGGATCTAGCGACAAGGATATTTCTGGTTACAAAGG ATGGTGTCCATGGACGACGTCAGGTGACCCAGTTCCACTTCCTCGGCTGG CCGGACTACGGGCTGCCCCGGAGCCCCATGGGATTGCTGAAGTTCCACAG GACAGTGGTTACTAAGACAACCAGCAATGACACACCCATCGTTGTTCACT GCAGTGCTGGTGTTGGCCGCACGGGCACGTTCATCACCATAGACGCCATG TTGGAGATGATGCAGACTGAAGAGAAAGTGGACGTGTTCGGGTTTGTGTC CAGGATGCGGCAGAACAGGAGCAACATGGTTCAGACAGAGGCCCAGTACG TGTTCATCTACCGAGCCTTACTGGAACAGTACCTGTATGGAGACACGGAG GTGGAGGTGGCCAACATCCAGCGCCGCATGCACAAACTCAGGACC
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
Sc0000001 | genome | Sc0000001:7646532..7648550 + |
Properties
Property Name | Value |
Transcript id | BL97078_cuf7 |
Biotype | protein_coding |
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