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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL97042_cuf4 >transcript:BL97042_cuf4-protein ID=transcript:BL97042_cuf4-protein|Name=transcript:BL97042_cuf4|organism=Branchiostoma lanceolatum|type=polypeptide|length=150bp
SFLPWRTLSIFAAARQRIQWLRGPPGPPGPHGLPGPPGFPGPKGHKGDGG DNGIPGKNGFDGQPGPMGLPGAPGVDGRSGPQGPRGDKGPEGQKGQKGNP GSMGLMGPPGEQGVRGIDGERGSMGPQGLKGTKGEPGRRGGNGMMGPKGE Run BLAST on NCBI mRNA from alignment at Sc0000076:244119..246752- Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL97042_cuf4 ID=transcript:BL97042_cuf4|Name=transcript:BL97042_cuf4|organism=Branchiostoma lanceolatum|type=mRNA|length=2634bp|location=Sequence derived from alignment at Sc0000076:244119..246752- (Branchiostoma lanceolatum) CTTCTTTTCTGCCTTGGCGGACCCTGTCCATCTTTGCTGCTGCTCGACAG
AGAATACAATGGCTGCGGGTCAGTACTGGTAAACACTAACGCACACACGG
GACGGCCGCTTGTGAGGAACAATGAAGTCATGTTTCAATTCAATCTGCCC
GAAAATGCACTATAGTTACTTAGCTGATATTCATATGTCGTATGCGCTGG
AATAGGGATGACTATTGTGAAGAAAAATAAGACATTTAAGTACTATTGGC
GGTGTTTTAAAGTTTACGGGGCTTGACCGAAGCGACAGCTTTCTGTGGTC
GCCAAGGAAGGCGATGGAATAGAATGTTTGAATCTATGTCAATATTTTGA
GTATCTCTGAATGCTTACCTTTGAGTGGCAGACACCAATCTCGTTCACGT
TGATTAAGTGTGACTCTTGACTTTCAGGGCCCACCGGGACCACCTGGACC
TCACGGCCTTCCCGGGCCTCCTGGGTTCCCCGGGCCGAAGGTTTGACGAC
AATTTCACCATTTTCTCATGATACATGCATTAGTCTGATGATTCGGCTTT
TATCTGACTTCTTGAAACACAGAATGTATGGTATTGATATAATCAATACT
GGTGCATCATGTTAATCTATTTCACCATCACCAGGGTCACAAAGGAGACG
GCGGAGACAACGGCATTCCTGGGAAGAACGGGTTCGACGTGAGTAGCTGT
TCATGTCAGACTTGCGTTTGGTTTGATATGTAAGAATAAGAGTAAAAATA
ATGTTTCTGAATCGCTAATTATCCTTAAGATTTTTATGTTACTTGGTGCA
CTGTGACTTCTTCCAACAGCAACAATGGTACCGATAGACAGACATACATA
GAGAGCCAATGCATAGGGACATAATCTCCAAGCAGATCTAATGTTTGCGA
AAACCATATTCAACTGGCAAAAGAAGTTATAGGGACAAAGGGTCCAAGGC
GGATTGATAATTTGTCTAAGAAATGGCATCAACGTCTTTGGACATCTCAT
GAACATCAGCATATTTTTTGCGATACTTATATCATATGCATGTCATTATC
GAAAACAGCTATTTGTTTGCATGTTGTTGAAGTGACAACTGAGTTGGTGA
TGTTACAGGGACAACCTGGACCCATGGGTCTCCCCGGGGCACCCGGTGTG
GACGGACGATCAGTGAGTATCAAACGTCTTTGTTTCACCAATGGTGGCAA
AGTTTAAACCACCACTACTGGGTGGAACGGCTGCTGAAATAGTTTTAGAA
GATGAAGCTTCATCTGGACATGCACACCTGCCATTGGCAGTGGATCTATA
CAGCTACCATTCCACCAATTATGGTTGAAAGTATTGAAGAGGTTTTTCTA
GGTAGATAAAAATGTTGACATTGTACATCAGCAAATTGTTTTCACACAAG
TCATTTTGTTTTCTGCCGGTAATATTACTACTAATGCAGGCATTGCTTCT
TCCTGTAGGGACCACAGGGGCCGAGGGGCGACAAAGGACCCGAGGGACAG
AAGGGGCAAAAGGTAGGCAAGATACAACAGCAGACAGGTAACCAATGGCT
TGACTGAGTCCTTTACTTTGGTTGATGAAGTTGGAGATGTTGACAAGTTT
TTTTCCTACCCCCTAGGGTAACCCAGGGTCCATGGGTCTGATGGGACCAC
CAGGTGAACAGGGAGTGCGTGTAAGTACACGTGGTCAGACACATTCTTCA
ACCTGATTCTGACACGTCCACTGTACCACTGGAACAGACTGTAACAGACT
GTACCACTCCCCACCCAACTCTATTCTGGGCAATCAGACTCTTGATACCA
CAGACTAGTGCTACATACCTAAACCCCGGACCTGATCCAGACTGGACCTA
ATGTTTAGGTTCAAGTCCAAAAAAACCTAAACGTCTGAAAACAAGTCCGA
ACTTCAAAAATAATCTCTTACTTATACTCTCCTTTTTGTTTTAAACCTTC
CTTAGATCATGAAATTTGCACTGGAAAAATGTGAAAACATTGCCGTTTTT
GTGTTTCTAACTGAACTTTTATGTTTACTACTGACTGTATATAATTTCGC
ATATATAGTTGCACAGATTGCAAAGAAAATATATGCCAATATGCAATTTT
ACATGTAACAGTAAAAAAATGTTTTTAGCACACATATGCCATGGGTTCGG
GTCCGGACTTATAAGTCCAGATCTGAACCTGAACCTCTGGATCTAAATCC
GGACCTGAACATGAACACGGGTTTAGGTACACAGCACTACCACAGACTAT
ACGAAAACATTAGATTACAACTACTACTGGTACTTGAGATAAAAGCATCT
TGGTGTTGTTGTTTGTTAGAATGTGATTAATGCTAATTTTCATTCCATCA
TCATTTGTTCATGTACAGGGTATTGACGGAGAGAGAGGCAGTATGGGACC
ACAAGGCCTGAAGGGAACCAAGGTAAAGATGTTCTTTCCTCGATACAGCT
ATGATTTTTGACCATGAATGATGATTTCTCGTTGCACAATATTGAAATTG
AATGCACCTTGTACCTGCATTATGTCACCATGATATAGAATGACTGTGAA
ATAAGGTGTTTTACTCTTGTGTGCTGTACAGGGAGAGCCAGGCAGGAGGG
GAGGAAACGGAATGATGGGACCCAAGGGAGAGCC Coding sequence (CDS) from alignment at Sc0000076:244119..246752- >transcript:BL97042_cuf4 ID=transcript:BL97042_cuf4|Name=transcript:BL97042_cuf4|organism=Branchiostoma lanceolatum|type=CDS|length=3600bp|location=Sequence derived from alignment at Sc0000076:244119..246752- (Branchiostoma lanceolatum) TCTTTTCTGCCTTGGCGGACCCTGTCCATCTTTGCTGCTGCTCGACAGAG AATACAATGGCTGCGGGGCCCACCGGGACCACCTGGACCTCACGGCCTTC CCGGGCCTCCTGGGTTCCCCGGGCCGAAGGGTCACAAAGGAGACGGCGGA GACAACGGCATTCCTGGGAAGAACGGGTTCGACGGACAACCTGGACCCAT GGGTCTCCCCGGGGCACCCGGTGTGGACGGACGATCAGGACCACAGGGGC CGAGGGGCGACAAAGGACCCGAGGGACAGAAGGGGCAAAAGGGTAACCCA GGGTCCATGGGTCTGATGGGACCACCAGGTGAACAGGGAGTGCGTGGTAT TGACGGAGAGAGAGGCAGTATGGGACCACAAGGCCTGAAGGGAACCAAGG GAGAGCCAGGCAGGAGGGGAGGAAACGGAATGATGGGACCCAAGGGAGAG TCTTTTCTGCCTTGGCGGACCCTGTCCATCTTTGCTGCTGCTCGACAGAG AATACAATGGCTGCGGGGCCCACCGGGACCACCTGGACCTCACGGCCTTC CCGGGCCTCCTGGGTTCCCCGGGCCGAAGGGTCACAAAGGAGACGGCGGA GACAACGGCATTCCTGGGAAGAACGGGTTCGACGGACAACCTGGACCCAT GGGTCTCCCCGGGGCACCCGGTGTGGACGGACGATCAGGACCACAGGGGC CGAGGGGCGACAAAGGACCCGAGGGACAGAAGGGGCAAAAGGGTAACCCA GGGTCCATGGGTCTGATGGGACCACCAGGTGAACAGGGAGTGCGTGGTAT TGACGGAGAGAGAGGCAGTATGGGACCACAAGGCCTGAAGGGAACCAAGG GAGAGCCAGGCAGGAGGGGAGGAAACGGAATGATGGGACCCAAGGGAGAG TCTTTTCTGCCTTGGCGGACCCTGTCCATCTTTGCTGCTGCTCGACAGAG AATACAATGGCTGCGGGGCCCACCGGGACCACCTGGACCTCACGGCCTTC CCGGGCCTCCTGGGTTCCCCGGGCCGAAGGGTCACAAAGGAGACGGCGGA GACAACGGCATTCCTGGGAAGAACGGGTTCGACGGACAACCTGGACCCAT GGGTCTCCCCGGGGCACCCGGTGTGGACGGACGATCAGGACCACAGGGGC CGAGGGGCGACAAAGGACCCGAGGGACAGAAGGGGCAAAAGGGTAACCCA GGGTCCATGGGTCTGATGGGACCACCAGGTGAACAGGGAGTGCGTGGTAT TGACGGAGAGAGAGGCAGTATGGGACCACAAGGCCTGAAGGGAACCAAGG GAGAGCCAGGCAGGAGGGGAGGAAACGGAATGATGGGACCCAAGGGAGAG TCTTTTCTGCCTTGGCGGACCCTGTCCATCTTTGCTGCTGCTCGACAGAG AATACAATGGCTGCGGGGCCCACCGGGACCACCTGGACCTCACGGCCTTC CCGGGCCTCCTGGGTTCCCCGGGCCGAAGGGTCACAAAGGAGACGGCGGA GACAACGGCATTCCTGGGAAGAACGGGTTCGACGGACAACCTGGACCCAT GGGTCTCCCCGGGGCACCCGGTGTGGACGGACGATCAGGACCACAGGGGC CGAGGGGCGACAAAGGACCCGAGGGACAGAAGGGGCAAAAGGGTAACCCA GGGTCCATGGGTCTGATGGGACCACCAGGTGAACAGGGAGTGCGTGGTAT TGACGGAGAGAGAGGCAGTATGGGACCACAAGGCCTGAAGGGAACCAAGG GAGAGCCAGGCAGGAGGGGAGGAAACGGAATGATGGGACCCAAGGGAGAG TCTTTTCTGCCTTGGCGGACCCTGTCCATCTTTGCTGCTGCTCGACAGAG AATACAATGGCTGCGGGGCCCACCGGGACCACCTGGACCTCACGGCCTTC CCGGGCCTCCTGGGTTCCCCGGGCCGAAGGGTCACAAAGGAGACGGCGGA GACAACGGCATTCCTGGGAAGAACGGGTTCGACGGACAACCTGGACCCAT GGGTCTCCCCGGGGCACCCGGTGTGGACGGACGATCAGGACCACAGGGGC CGAGGGGCGACAAAGGACCCGAGGGACAGAAGGGGCAAAAGGGTAACCCA GGGTCCATGGGTCTGATGGGACCACCAGGTGAACAGGGAGTGCGTGGTAT TGACGGAGAGAGAGGCAGTATGGGACCACAAGGCCTGAAGGGAACCAAGG GAGAGCCAGGCAGGAGGGGAGGAAACGGAATGATGGGACCCAAGGGAGAG TCTTTTCTGCCTTGGCGGACCCTGTCCATCTTTGCTGCTGCTCGACAGAG AATACAATGGCTGCGGGGCCCACCGGGACCACCTGGACCTCACGGCCTTC CCGGGCCTCCTGGGTTCCCCGGGCCGAAGGGTCACAAAGGAGACGGCGGA GACAACGGCATTCCTGGGAAGAACGGGTTCGACGGACAACCTGGACCCAT GGGTCTCCCCGGGGCACCCGGTGTGGACGGACGATCAGGACCACAGGGGC CGAGGGGCGACAAAGGACCCGAGGGACAGAAGGGGCAAAAGGGTAACCCA GGGTCCATGGGTCTGATGGGACCACCAGGTGAACAGGGAGTGCGTGGTAT TGACGGAGAGAGAGGCAGTATGGGACCACAAGGCCTGAAGGGAACCAAGG GAGAGCCAGGCAGGAGGGGAGGAAACGGAATGATGGGACCCAAGGGAGAG TCTTTTCTGCCTTGGCGGACCCTGTCCATCTTTGCTGCTGCTCGACAGAG AATACAATGGCTGCGGGGCCCACCGGGACCACCTGGACCTCACGGCCTTC CCGGGCCTCCTGGGTTCCCCGGGCCGAAGGGTCACAAAGGAGACGGCGGA GACAACGGCATTCCTGGGAAGAACGGGTTCGACGGACAACCTGGACCCAT GGGTCTCCCCGGGGCACCCGGTGTGGACGGACGATCAGGACCACAGGGGC CGAGGGGCGACAAAGGACCCGAGGGACAGAAGGGGCAAAAGGGTAACCCA GGGTCCATGGGTCTGATGGGACCACCAGGTGAACAGGGAGTGCGTGGTAT TGACGGAGAGAGAGGCAGTATGGGACCACAAGGCCTGAAGGGAACCAAGG GAGAGCCAGGCAGGAGGGGAGGAAACGGAATGATGGGACCCAAGGGAGAG TCTTTTCTGCCTTGGCGGACCCTGTCCATCTTTGCTGCTGCTCGACAGAG AATACAATGGCTGCGGGGCCCACCGGGACCACCTGGACCTCACGGCCTTC CCGGGCCTCCTGGGTTCCCCGGGCCGAAGGGTCACAAAGGAGACGGCGGA GACAACGGCATTCCTGGGAAGAACGGGTTCGACGGACAACCTGGACCCAT GGGTCTCCCCGGGGCACCCGGTGTGGACGGACGATCAGGACCACAGGGGC CGAGGGGCGACAAAGGACCCGAGGGACAGAAGGGGCAAAAGGGTAACCCA GGGTCCATGGGTCTGATGGGACCACCAGGTGAACAGGGAGTGCGTGGTAT TGACGGAGAGAGAGGCAGTATGGGACCACAAGGCCTGAAGGGAACCAAGG GAGAGCCAGGCAGGAGGGGAGGAAACGGAATGATGGGACCCAAGGGAGAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
Sc0000076 | genome | Sc0000076:244119..246752 - |
Properties
Property Name | Value |
Transcript id | BL97042_cuf4 |
Biotype | protein_coding |
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