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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL96994_cuf9 >transcript:BL96994_cuf9-protein ID=transcript:BL96994_cuf9-protein|Name=transcript:BL96994_cuf9|organism=Branchiostoma lanceolatum|type=polypeptide|length=236bp
GTTGWFVIDDLEPAESYYFQVRAWNIIGVSEPGNALEVQTFASNPSAPRN
LQVPYKNSTAVQLSWERPQQRNGDVRVYELQYRDQNSQDFDSIEVVSTSP
TTTQLVVNLWPLTFYHFRVRAATVWNGERLWGNYSNFLQVQTNPGAPFAA
PQNVQATGNSSDTILVEWQEIPFSMQNGVITSYTLRYKRTDNGEVWRTKT
TDRPTTSTFLSGLKPWREYRIEVQGTNAQGSGPFSD Run BLAST on NCBI mRNA from alignment at Sc0000004:6745751..6748945- Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL96994_cuf9 ID=transcript:BL96994_cuf9|Name=transcript:BL96994_cuf9|organism=Branchiostoma lanceolatum|type=mRNA|length=3195bp|location=Sequence derived from alignment at Sc0000004:6745751..6748945- (Branchiostoma lanceolatum)
GGCACAACCGGCTGGTTCGTCATCGACGACCTTGAGCCGGCGGAGTCGTA
TTACTTCCAGGTCCGCGCATGGAACATCATCGGCGTCAGCGAGCCAGGAA
ACGCTCTGGAGGTCCAGACTTTCGCTTCAAGTGAGTTCATTGGTTCAGAC
CCTTGTAGGGCCTAGTGGATAGGGCAGCAAATTTCCTTGCTGTTTCAGTA
GCAGGGTATATTCTTAAAGGGAGGGGTTGCTAGCCCTTTTCTTTTATTGT
GCTCGAGGAACCTCCTCCAACACCGGACCCTCCTTTTACATCCTTTCTGA
AAGATGGCTGTATAGCCCCAACTAAGATGTCCTGACCCCGGGAATTGAAC
TGGGGTCTCTGAGTTACCAACAGTTATTGTAACCAGGGGCTCAACTCTAA
GGTTGCTACAAGTTGAGCCACAGTCCCAAACATAATACCCAGCAATTTAC
CAATCTGATGAAAGTCTGATCAAGACAATGATACTCTCTGTTATTTCCCC
AGATCCCTCAGCGCCTAGAAACCTGCAGGTTCCCTATAAGAACTCCACAG
CCGTGCAGCTGAGCTGGGAGAGACCGCAGCAGCGCAACGGGGACGTGCGG
GTGTACGAGCTGCAGTACCGGGACCAGAACTCGCAAGGTAGGTATAAAGC
TTAACAGGCATATAGAGGACTTCAGATGTGAAAAAGGGCACATTTGTAGG
CACCATAATTTACTTATAGCTAAGAGCTCATTGAGATAGAGTTGGTGGTT
CTGATAGTAAATAAAAGAAGGAATTGCCCAAGTTCCTACCAATAGGTGCC
GATAAGATGGGGGAAAAACTCACCTTCATCCCACATTTTAGTGTCATTTC
AACTGTAAGGTGACTTGTATTTAAAGTATGTAACAAAGAAGTAAGCCTGA
ACATGAGTAAGTTGTGTACCATGTCATTCTGTTCATTTTTACTTCAGATT
CAGTGTTGCAAACCACATGTAACCAATCAAATTGTTTTCTTTCCCTCAGA
TTTTGACTCCATTGAAGTTGTGTCGACCTCCCCCACCACGACCCAGCTGG
TGGTTAACCTTTGGCCTCTGACCTTTTACCATTTCCGTGTGCGGGCAGCG
ACGGTTTGGAACGGGGAGAGACTCTGGGGAAACTACAGCAATTTCCTACA
GGTCCAGACTAACCCTGGAGGTGAGCTGTCAATCAACCAACCAATCAATC
GATCAATCAATCAATTAATCAACTACTTGCTTGAACAATCAATCAATTAT
CTTAGAACAATTAATCAACCAACTGGTTAATCTGCATAGTGCAATCCAGT
CATTTTTACAGACAGACATAGCATATAAGTATAACAGTTAACAAAAACTT
TCCCATGATATATTTGAAATTTTTCATTAAAAGACTTATTCAAGAAGCAC
CAAGGGCTTATACATGTGTATAGTGCCTTGTGCTGTAAAAATAATGATAA
GGCAAGAAGCAGGTCCTACAGACTTCTTTCATGTACATTTGTATTGCAAA
GAAGTTCAGACACAAAATATCCTTTAGGAAATGTGCTTCATCCTATCCTG
TAGATTTGCAACTAACAATTAGTTTTTGTCTTTTTTTGAAATTCCTATCT
TTTCAATTCTGTCTCCTCTCTTCCTTGCCTGTCTCTGTCCTTTCACTACC
AGACTTTGGAGGGTTACGTGAGTATAAATGATATCTTCTTCTTTCTGCTC
TTCTGTACGGATCTATACCTGTCATGAACCAACACTGGCACACACCTGCT
TCTGTACCACTCCACAGATATGACTTCACTTCAGAATAACACACACCAGC
TTTTCAGGCATTTGGCACTGAATGGTGGTGTAACATGGAGCGATTTGTCA
CACTTATGTAAAATATGTCTGAACGTTGCATGTTTGACTTCAAGTCTTGT
TCAAAGTGATCAAGAATAGATCTCTGTTGACTTGAATGATAGCTGATATT
CCCCACTGCAACTTAATGAAGTTTGAGGATTGAATTTGAACAATTCCTCT
GCACAAAACGTGTCTCCATAATACATGTACAGTACTACCTAGTACATATC
ATACATGTACAACACCATCCTTCTCTTCTTCATTTGTCATTTTTCGTTTA
CCTCTTGATGCTTTGAACACTGCAACAGTGATGCATGACAGGAATAAATC
TCACATTGTGAATTTAATGCTGAACATGTAATCCATGGCATGAGAGCATA
GACAAACTTGATTTTTATTTTGATTAGAATTTAGAGAATCATCATGGGTG
ACCTTTTGGTTTCTGGTCCATCTCTTTATTTCTTCCTGTCTGCAGAAACC
AATATCAACCAATTTGTAAAATTTATGTATTTAATGTATCTCTCAGCACC
GTTTGCGGCGCCCCAGAACGTCCAAGCCACGGGGAACTCCTCGGACACGA
TCCTGGTGGAGTGGCAGGAGATCCCCTTCAGCATGCAGAACGGCGTCATC
ACGTCCTACACGCTGCGCTACAAGGTAAATCTCTTTTAACATCCAATCAG
TATTGGTATTTGGGGTTTTGGTTTATTGCACAAAGCATATGGCAGCCTAA
CGGCTGAATTGCACGCTCAGTTACATAATATTACTGCAACAGTTAAAGCA
ATTAACTGAAAACATCAAAACACTAACATTACTCTATAGTACGCATTACA
ACAAATTTAAAATCGCTCTAGGCGTAGTTTTACTTTCTACGAAGATGTAA
TGTTAATAATTATTAAAACGTAGTATCAGTACTGTCACCTCCTGCCATCT
TACAGACAGGCAGGCACAGGCAGACTCTTTCCTCAAATACCCTGGACATT
TAGATACGATACTTTTTGATTTGTACATGTGTATTTAGAATATTGTACTC
GTTTTGCTGTCCATGGTAATGTCCTGTCTTTGTCAGCAGGGCTATAGCCC
TTTGTAATAGCCACAAGACAATTTCAGATGGTTCAATAGAACGTCTGACT
GTTTAAAATTTTATCCAGTTGCTTGTCAGGAGTAACAATTTTTGGCATAT
CTTATTACCTGGATGTCTAACTTTCACCAACGCATTACTTCTACTACAAG
CGGACCGACAATGGCGAGGTCTGGAGGACAAAGACAACGGACCGACCAAC
CACGTCGACCTTCCTGTCGGGCCTGAAGCCGTGGCGGGAGTACCGGATAG
AAGTACAGGGGACAAACGCGCAGGGCTCCGGGCCGTTTTCTGATC Coding sequence (CDS) from alignment at Sc0000004:6745751..6748945- >transcript:BL96994_cuf9 ID=transcript:BL96994_cuf9|Name=transcript:BL96994_cuf9|organism=Branchiostoma lanceolatum|type=CDS|length=3540bp|location=Sequence derived from alignment at Sc0000004:6745751..6748945- (Branchiostoma lanceolatum)
GGCACAACCGGCTGGTTCGTCATCGACGACCTTGAGCCGGCGGAGTCGTA
TTACTTCCAGGTCCGCGCATGGAACATCATCGGCGTCAGCGAGCCAGGAA
ACGCTCTGGAGGTCCAGACTTTCGCTTCAAATCCCTCAGCGCCTAGAAAC
CTGCAGGTTCCCTATAAGAACTCCACAGCCGTGCAGCTGAGCTGGGAGAG
ACCGCAGCAGCGCAACGGGGACGTGCGGGTGTACGAGCTGCAGTACCGGG
ACCAGAACTCGCAAGATTTTGACTCCATTGAAGTTGTGTCGACCTCCCCC
ACCACGACCCAGCTGGTGGTTAACCTTTGGCCTCTGACCTTTTACCATTT
CCGTGTGCGGGCAGCGACGGTTTGGAACGGGGAGAGACTCTGGGGAAACT
ACAGCAATTTCCTACAGGTCCAGACTAACCCTGGAGCACCGTTTGCGGCG
CCCCAGAACGTCCAAGCCACGGGGAACTCCTCGGACACGATCCTGGTGGA
GTGGCAGGAGATCCCCTTCAGCATGCAGAACGGCGTCATCACGTCCTACA
CGCTGCGCTACAAGCGGACCGACAATGGCGAGGTCTGGAGGACAAAGACA
ACGGACCGACCAACCACGTCGACCTTCCTGTCGGGCCTGAAGCCGTGGCG
GGAGTACCGGATAGAAGTACAGGGGACAAACGCGCAGGGCTCCGGGCCGT
TTTCTGATGGCACAACCGGCTGGTTCGTCATCGACGACCTTGAGCCGGCG
GAGTCGTATTACTTCCAGGTCCGCGCATGGAACATCATCGGCGTCAGCGA
GCCAGGAAACGCTCTGGAGGTCCAGACTTTCGCTTCAAATCCCTCAGCGC
CTAGAAACCTGCAGGTTCCCTATAAGAACTCCACAGCCGTGCAGCTGAGC
TGGGAGAGACCGCAGCAGCGCAACGGGGACGTGCGGGTGTACGAGCTGCA
GTACCGGGACCAGAACTCGCAAGATTTTGACTCCATTGAAGTTGTGTCGA
CCTCCCCCACCACGACCCAGCTGGTGGTTAACCTTTGGCCTCTGACCTTT
TACCATTTCCGTGTGCGGGCAGCGACGGTTTGGAACGGGGAGAGACTCTG
GGGAAACTACAGCAATTTCCTACAGGTCCAGACTAACCCTGGAGCACCGT
TTGCGGCGCCCCAGAACGTCCAAGCCACGGGGAACTCCTCGGACACGATC
CTGGTGGAGTGGCAGGAGATCCCCTTCAGCATGCAGAACGGCGTCATCAC
GTCCTACACGCTGCGCTACAAGCGGACCGACAATGGCGAGGTCTGGAGGA
CAAAGACAACGGACCGACCAACCACGTCGACCTTCCTGTCGGGCCTGAAG
CCGTGGCGGGAGTACCGGATAGAAGTACAGGGGACAAACGCGCAGGGCTC
CGGGCCGTTTTCTGATGGCACAACCGGCTGGTTCGTCATCGACGACCTTG
AGCCGGCGGAGTCGTATTACTTCCAGGTCCGCGCATGGAACATCATCGGC
GTCAGCGAGCCAGGAAACGCTCTGGAGGTCCAGACTTTCGCTTCAAATCC
CTCAGCGCCTAGAAACCTGCAGGTTCCCTATAAGAACTCCACAGCCGTGC
AGCTGAGCTGGGAGAGACCGCAGCAGCGCAACGGGGACGTGCGGGTGTAC
GAGCTGCAGTACCGGGACCAGAACTCGCAAGATTTTGACTCCATTGAAGT
TGTGTCGACCTCCCCCACCACGACCCAGCTGGTGGTTAACCTTTGGCCTC
TGACCTTTTACCATTTCCGTGTGCGGGCAGCGACGGTTTGGAACGGGGAG
AGACTCTGGGGAAACTACAGCAATTTCCTACAGGTCCAGACTAACCCTGG
AGCACCGTTTGCGGCGCCCCAGAACGTCCAAGCCACGGGGAACTCCTCGG
ACACGATCCTGGTGGAGTGGCAGGAGATCCCCTTCAGCATGCAGAACGGC
GTCATCACGTCCTACACGCTGCGCTACAAGCGGACCGACAATGGCGAGGT
CTGGAGGACAAAGACAACGGACCGACCAACCACGTCGACCTTCCTGTCGG
GCCTGAAGCCGTGGCGGGAGTACCGGATAGAAGTACAGGGGACAAACGCG
CAGGGCTCCGGGCCGTTTTCTGATGGCACAACCGGCTGGTTCGTCATCGA
CGACCTTGAGCCGGCGGAGTCGTATTACTTCCAGGTCCGCGCATGGAACA
TCATCGGCGTCAGCGAGCCAGGAAACGCTCTGGAGGTCCAGACTTTCGCT
TCAAATCCCTCAGCGCCTAGAAACCTGCAGGTTCCCTATAAGAACTCCAC
AGCCGTGCAGCTGAGCTGGGAGAGACCGCAGCAGCGCAACGGGGACGTGC
GGGTGTACGAGCTGCAGTACCGGGACCAGAACTCGCAAGATTTTGACTCC
ATTGAAGTTGTGTCGACCTCCCCCACCACGACCCAGCTGGTGGTTAACCT
TTGGCCTCTGACCTTTTACCATTTCCGTGTGCGGGCAGCGACGGTTTGGA
ACGGGGAGAGACTCTGGGGAAACTACAGCAATTTCCTACAGGTCCAGACT
AACCCTGGAGCACCGTTTGCGGCGCCCCAGAACGTCCAAGCCACGGGGAA
CTCCTCGGACACGATCCTGGTGGAGTGGCAGGAGATCCCCTTCAGCATGC
AGAACGGCGTCATCACGTCCTACACGCTGCGCTACAAGCGGACCGACAAT
GGCGAGGTCTGGAGGACAAAGACAACGGACCGACCAACCACGTCGACCTT
CCTGTCGGGCCTGAAGCCGTGGCGGGAGTACCGGATAGAAGTACAGGGGA
CAAACGCGCAGGGCTCCGGGCCGTTTTCTGATGGCACAACCGGCTGGTTC
GTCATCGACGACCTTGAGCCGGCGGAGTCGTATTACTTCCAGGTCCGCGC
ATGGAACATCATCGGCGTCAGCGAGCCAGGAAACGCTCTGGAGGTCCAGA
CTTTCGCTTCAAATCCCTCAGCGCCTAGAAACCTGCAGGTTCCCTATAAG
AACTCCACAGCCGTGCAGCTGAGCTGGGAGAGACCGCAGCAGCGCAACGG
GGACGTGCGGGTGTACGAGCTGCAGTACCGGGACCAGAACTCGCAAGATT
TTGACTCCATTGAAGTTGTGTCGACCTCCCCCACCACGACCCAGCTGGTG
GTTAACCTTTGGCCTCTGACCTTTTACCATTTCCGTGTGCGGGCAGCGAC
GGTTTGGAACGGGGAGAGACTCTGGGGAAACTACAGCAATTTCCTACAGG
TCCAGACTAACCCTGGAGCACCGTTTGCGGCGCCCCAGAACGTCCAAGCC
ACGGGGAACTCCTCGGACACGATCCTGGTGGAGTGGCAGGAGATCCCCTT
CAGCATGCAGAACGGCGTCATCACGTCCTACACGCTGCGCTACAAGCGGA
CCGACAATGGCGAGGTCTGGAGGACAAAGACAACGGACCGACCAACCACG
TCGACCTTCCTGTCGGGCCTGAAGCCGTGGCGGGAGTACCGGATAGAAGT
ACAGGGGACAAACGCGCAGGGCTCCGGGCCGTTTTCTGAT
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000004 | genome | Sc0000004:6745751..6748945 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL96994_cuf9 |
| Biotype | protein_coding |
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