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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL96980_cuf0 >transcript:BL96980_cuf0-protein ID=transcript:BL96980_cuf0-protein|Name=transcript:BL96980_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=227bp
LGRPAFWLLLTACLATGHGYDILDEIFGVDRPASRVKRQEPDSNQCLSNP CQHDGICLDANGKYTCLCKAGWKGTNCDQVLTRPDNKGKEFMFGFLQNFD DAPTLEVFITSSSETPVAVTVSAPGVDYAHQLTVSNAAIEIVNLPSTLQL IESEKAQKGIFISAESEVIVYGVNKYRATTDGFLALPVDVLGTEYFVASY TPISSTLYSEFGIWGVFDQTKVTVTLS Run BLAST on NCBI mRNA from alignment at Sc0000004:3614841..3617355+ Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL96980_cuf0 ID=transcript:BL96980_cuf0|Name=transcript:BL96980_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=2515bp|location=Sequence derived from alignment at Sc0000004:3614841..3617355+ (Branchiostoma lanceolatum) GACTCGGCCGGCCGGCCTTCTGGCTGCTGCTCACCGCGTGTCTGGCGACA
GGACACGGGTATGACATCCTGGACGAGATCTTCGGAGTGGACCGACGTAA
GTTCAACTTACATGTGCAGATAGTTCACACAAAAATGGTGTTTCTATCCT
ACTCCGTAGTTTTCATTCTGTGCATTCTATGTATTGTTAATCCGCCGTTC
TCTATTAAGTTGCTTTGACCCGAAGCCAACGTCAATTCGCATTTGTGAAA
AAGATTGAATATCAGGCGACCTCCAAAAAGAAATGACATAACGCTTAGAG
CGTTTTCAGTACAGATGTTGGTGTCTTCGATTTTGATTCAATGGAAGATG
TGATATAGCAAAGATATAGAGGTTTTTGTTTGGTATATGTTCTGTGTCTC
TGGTCATTTGTTCAGCCAACCTGACCACTTACAACTCATACCGAAGGCAA
CTTTTTCAATGCCAAACTTTTCTTTTCTCACGCTGTCATTAGCTTAATTT
GTTGTGCCCAGAATATGTCATCAAATCATATAATCAAATCGATGTGGCCT
TAATGTTGAAGACTGACAATGTCGTGCCGTGTTTTAGTTACAGTATCTTA
TTGCTGAGTACATTTTCTATTCCGTGGTGTGTAGCCGCTAGCAGAGTGAA
GCGCCAGGAACCGGACAGTAACCAATGTCTCAGCAACCCCTGTCAGCACG
ACGGCATCTGCCTGGACGCGAACGGCAAGTACACATGTCTGTGCAAGGCT
GGCTGGAAAGGGACCAACTGTGATCAAGGTAGGTTTCATTCAATTATATT
TGGCACTTTTTTTTCCACAAACCTAGCTCAACTGATAGCTTGGAACGCGT
GCTGAAGCATATCAATACCCCCATTTCACTAGGACGGCGCTCTCGCCGCG
CGCTCTCTGCGACCTAAGATTTAACAGAGCGCTCAGCGAATTTCAAAGAT
GAAAGAAACGAATCTTTTTACGCTTAAGTGTTTTGTTGTCTTTTTGGCCG
TATCTTTGCATTTTGCTTGATATTCTAATTATGAAATCAACTATAAGACA
AATCCGATTTTGGTCGCAGCGACATGCCATCGCCGTCTAGTGGAATGGGG
GCCTTAAGAACTAGCACTGCTGATGAGACAATACCTCAGTATGTTTTAGA
GTTTATGGTACATCTCACTTATATCTAAGATATCGATTTATCATTATCAT
CATCATCGTCGCCACTTTGTATTTCGATTTATATCTAACTTAGAATACAA
AAAGAAGACACCTAAAAGACAAATGCTCCATTGCTACAAGATAATTTTCT
ATTCTTATGTCAAGTTTGTTTGTTCGTTTGTTTGTTTGTTTGGTAGTTTG
TTTGAACCTTTGTTTATTCATGAGAAGTTCAAATTGGCATGCATGCCGGT
TTTTTATTGAGGTCATGAGGAAGAAGTTAGGGTCAGATAGCATGTAACAG
AGATACAGCAGACATCATTGTGATATTTATTTTTGTCGCAGTCCTGACTA
GACCAGACAACAAGGGGAAATCCTTGAAAAACCTTGAAGGGTTCATGTTT
CCCCTGCATGTTTTTCCTCACCATTTGCAACAACATGTACTTGATTTTAT
GTGCAAATAAAAAAACAACAATATTCTTATTTCAAGTTTGTGATATTTGT
TTTCTTGCAGTCCTGACAAGACCAGACAACAAGGGGAAAGAGTTCATGTT
CGGCTTTCTGCAGAATTTTGACGACGCGCCGACGCTGGAGGTGTTCATCA
CCAGCTCGAGCGAGACGCCGGTAGCGGTCACCGTCTCCGCCCCGGGGGTG
GACTATGCCCACCAGCTCACCGTGTCAAACGCAGCGATTGAGGTAGACCT
TGTGGAAAATTGTTGCCAGCTTTAATTTTCAGTTAATGAAACAAGCATAT
GCTGAGCCCACGTTGCTGCCCATGACTTGTATTCGAAACGACCATAGCCC
AAGCGTACACGTCATTAATTTTTTGTATAATATTTAATTGGCAGCTTTTT
ATATTGTCTCCTGATTTGTCTCTTATTGACACTTAGTCTTTAACAAAGCC
CCAACAAATTACAAAACAAATGTACACTTTAGCTAAATCAGTACTTTAAA
TCTAAAAAAAATATCAAACCCAACGACATGAAAGTGAGCATCTTCCCGCT
TCATTGAATGAAAACACTACATCCCACATGTACATCTGTCAAGTTTTGCC
CAAAGCTTTCTTTTCCAGCAAATGATTCTCATCATAATCATTCCTGCATT
TCAGATCGTGAACCTCCCATCAACATTGCAGCTGATTGAAAGCGAGAAGG
CTCAAAAGGGTATCTTCATAAGCGCGGAGTCTGAGGTCATAGTTTACGGC
GTCAACAAGTACAGGGCCACCACGGATGGCTTTCTCGCCCTCCCTGTCGA
CGTTCTGGGCACAGAATATTTCGTGGCCTCGTACACGCCGATTTCGTCCA
CGCTCTATTCTGAATTTGGCATTTGGGGAGTTTTCGATCAAACCAAAGTG
ACGGTCACCTTGTCG Coding sequence (CDS) from alignment at Sc0000004:3614841..3617355+ >transcript:BL96980_cuf0 ID=transcript:BL96980_cuf0|Name=transcript:BL96980_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=2724bp|location=Sequence derived from alignment at Sc0000004:3614841..3617355+ (Branchiostoma lanceolatum) CTCGGCCGGCCGGCCTTCTGGCTGCTGCTCACCGCGTGTCTGGCGACAGG ACACGGGTATGACATCCTGGACGAGATCTTCGGAGTGGACCGACCCGCTA GCAGAGTGAAGCGCCAGGAACCGGACAGTAACCAATGTCTCAGCAACCCC TGTCAGCACGACGGCATCTGCCTGGACGCGAACGGCAAGTACACATGTCT GTGCAAGGCTGGCTGGAAAGGGACCAACTGTGATCAAGTCCTGACAAGAC CAGACAACAAGGGGAAAGAGTTCATGTTCGGCTTTCTGCAGAATTTTGAC GACGCGCCGACGCTGGAGGTGTTCATCACCAGCTCGAGCGAGACGCCGGT AGCGGTCACCGTCTCCGCCCCGGGGGTGGACTATGCCCACCAGCTCACCG TGTCAAACGCAGCGATTGAGATCGTGAACCTCCCATCAACATTGCAGCTG ATTGAAAGCGAGAAGGCTCAAAAGGGTATCTTCATAAGCGCGGAGTCTGA GGTCATAGTTTACGGCGTCAACAAGTACAGGGCCACCACGGATGGCTTTC TCGCCCTCCCTGTCGACGTTCTGGGCACAGAATATTTCGTGGCCTCGTAC ACGCCGATTTCGTCCACGCTCTATTCTGAATTTGGCATTTGGGGAGTTTT CGATCAAACCAAAGTGACGGTCACCTTGTCGCTCGGCCGGCCGGCCTTCT GGCTGCTGCTCACCGCGTGTCTGGCGACAGGACACGGGTATGACATCCTG GACGAGATCTTCGGAGTGGACCGACCCGCTAGCAGAGTGAAGCGCCAGGA ACCGGACAGTAACCAATGTCTCAGCAACCCCTGTCAGCACGACGGCATCT GCCTGGACGCGAACGGCAAGTACACATGTCTGTGCAAGGCTGGCTGGAAA GGGACCAACTGTGATCAAGTCCTGACAAGACCAGACAACAAGGGGAAAGA GTTCATGTTCGGCTTTCTGCAGAATTTTGACGACGCGCCGACGCTGGAGG TGTTCATCACCAGCTCGAGCGAGACGCCGGTAGCGGTCACCGTCTCCGCC CCGGGGGTGGACTATGCCCACCAGCTCACCGTGTCAAACGCAGCGATTGA GATCGTGAACCTCCCATCAACATTGCAGCTGATTGAAAGCGAGAAGGCTC AAAAGGGTATCTTCATAAGCGCGGAGTCTGAGGTCATAGTTTACGGCGTC AACAAGTACAGGGCCACCACGGATGGCTTTCTCGCCCTCCCTGTCGACGT TCTGGGCACAGAATATTTCGTGGCCTCGTACACGCCGATTTCGTCCACGC TCTATTCTGAATTTGGCATTTGGGGAGTTTTCGATCAAACCAAAGTGACG GTCACCTTGTCGCTCGGCCGGCCGGCCTTCTGGCTGCTGCTCACCGCGTG TCTGGCGACAGGACACGGGTATGACATCCTGGACGAGATCTTCGGAGTGG ACCGACCCGCTAGCAGAGTGAAGCGCCAGGAACCGGACAGTAACCAATGT CTCAGCAACCCCTGTCAGCACGACGGCATCTGCCTGGACGCGAACGGCAA GTACACATGTCTGTGCAAGGCTGGCTGGAAAGGGACCAACTGTGATCAAG TCCTGACAAGACCAGACAACAAGGGGAAAGAGTTCATGTTCGGCTTTCTG CAGAATTTTGACGACGCGCCGACGCTGGAGGTGTTCATCACCAGCTCGAG CGAGACGCCGGTAGCGGTCACCGTCTCCGCCCCGGGGGTGGACTATGCCC ACCAGCTCACCGTGTCAAACGCAGCGATTGAGATCGTGAACCTCCCATCA ACATTGCAGCTGATTGAAAGCGAGAAGGCTCAAAAGGGTATCTTCATAAG CGCGGAGTCTGAGGTCATAGTTTACGGCGTCAACAAGTACAGGGCCACCA CGGATGGCTTTCTCGCCCTCCCTGTCGACGTTCTGGGCACAGAATATTTC GTGGCCTCGTACACGCCGATTTCGTCCACGCTCTATTCTGAATTTGGCAT TTGGGGAGTTTTCGATCAAACCAAAGTGACGGTCACCTTGTCGCTCGGCC GGCCGGCCTTCTGGCTGCTGCTCACCGCGTGTCTGGCGACAGGACACGGG TATGACATCCTGGACGAGATCTTCGGAGTGGACCGACCCGCTAGCAGAGT GAAGCGCCAGGAACCGGACAGTAACCAATGTCTCAGCAACCCCTGTCAGC ACGACGGCATCTGCCTGGACGCGAACGGCAAGTACACATGTCTGTGCAAG GCTGGCTGGAAAGGGACCAACTGTGATCAAGTCCTGACAAGACCAGACAA CAAGGGGAAAGAGTTCATGTTCGGCTTTCTGCAGAATTTTGACGACGCGC CGACGCTGGAGGTGTTCATCACCAGCTCGAGCGAGACGCCGGTAGCGGTC ACCGTCTCCGCCCCGGGGGTGGACTATGCCCACCAGCTCACCGTGTCAAA CGCAGCGATTGAGATCGTGAACCTCCCATCAACATTGCAGCTGATTGAAA GCGAGAAGGCTCAAAAGGGTATCTTCATAAGCGCGGAGTCTGAGGTCATA GTTTACGGCGTCAACAAGTACAGGGCCACCACGGATGGCTTTCTCGCCCT CCCTGTCGACGTTCTGGGCACAGAATATTTCGTGGCCTCGTACACGCCGA TTTCGTCCACGCTCTATTCTGAATTTGGCATTTGGGGAGTTTTCGATCAA ACCAAAGTGACGGTCACCTTGTCG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
Sc0000004 | genome | Sc0000004:3614841..3617355 + |
Properties
Property Name | Value |
Transcript id | BL96980_cuf0 |
Biotype | protein_coding |
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