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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL96947_cuf9 >transcript:BL96947_cuf9-protein ID=transcript:BL96947_cuf9-protein|Name=transcript:BL96947_cuf9|organism=Branchiostoma lanceolatum|type=polypeptide|length=143bp
VLFPMSMIVTVVFWGMYAVDRDLIFPAALDKIIPPWVNHVWHTTVVPVLL
LEMYLVHHRHPSRRAGLTGAVTVGIVYLIWVLIVAQVGGFWVYPFMAAMS
NFQFFLFCCFVAVIGCSFYLLGEFCNKIFWGSMETSRKGKKRA Run BLAST on NCBI mRNA from alignment at Sc0000044:1390139..1395123+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL96947_cuf9 ID=transcript:BL96947_cuf9|Name=transcript:BL96947_cuf9|organism=Branchiostoma lanceolatum|type=mRNA|length=4985bp|location=Sequence derived from alignment at Sc0000044:1390139..1395123+ (Branchiostoma lanceolatum)
TGTGCTGTTCCCTATGAGCATGGTAAGTTCATAGGTGAGAGGTCAGTAAA
TTCATAGTTGAGAGATTGTAGGTAATACAGGACTATGTATTGGCTTCTAT
GCTGTTCCCTAATGAGCATGGTAAGTTCATAGTTGAGAGGTTGTAGGTAA
AACAGGACTATGTGCTGGCTTCTTTTTTGCTGCTCCCTATGAGCAAGGAG
GTTATATAACCTCCTTGCTATGAGCATGGTAAGTTCATAGTTGAGAGGTC
GTAGGTAATACAGGACTATATACTGCCTGCTGTGCTGTTCCCTATGAGTA
TGAGCATGGTTCATAGGTACTAGATAAGTATAAGTAGCCAGTTGATACTA
TCTACTTTTGACTACATTGTATAGCCTAGAACCTTTCTGCACTTTGTACT
TGTTTAGTATAAGTAGTTCTTCTTCTTTCTTGTACTTTTCTCTATTTGTG
TATGCTATAATTCTGTGCCTTCAGAGCTCTATTACCACGTAATTGCTTTC
TTGAAGGTGTTCTTTATTTGTGTGCGCTATAACTCTGTACGATAACTTAA
TAAGAGCTCTATCATCACATTATGCCACAGATCGTAACAGTCGTGTTCTG
GGGGATGTACGCCGTTGATCGAGATCTGATCTTTCCAGCGGCCCTGGACA
AGATCATCCCACCCTGGGTCAACCACGTCTGGGTAGGGTTGTTTGTTTGT
TTGTTTGTTTGTTTTATCCCAATTGCGATTAGTGATACAATATTTACATA
ATGATAATCCTTTCTGGACTCCTTAGTATGATAAAAGATGTGTCTCCATC
TAAGCAGCAAAAGGAGGTAGAGACCAAAATGATGTCAATCACATGAATAT
TGAGTTTCATCATAATCTAATTGTTTTGTTTATTCATTTATGAATCTTTA
GAGTGGTCCCTTCATTTAACTAAGTAACTGATTTCCAAGGGAGCCCTAAC
AAAATCATAAATCAGGATACAGAAGGATAATTCAACATAAACTGAATCAG
TGAATGAATATTACAAATATTACATTTCACAATTTGTTTAAAACACCATT
AACTGTTTCTCCAGCAGTGTTATGGGCCTGTCCTTTTTATCTTTCTTTTC
TCCACTGACTATTATGACTGCTCTTACGAAACTTTCCATTTTGCTGTCCA
CAGCACACGACCGTAGTGCCTGTCCTGTTGCTGGAGATGTACCTGGTTCA
CCACAGGCACCCTTCGCGTCGGGCAGGCCTCACCGGAGCGGTCACCGTTG
GGATTGTATACCTTATATGGTGAGGCCCCAAATTCTTTCTGGCTCCTAAT
TTTGATTTCTATCTTGTTAAAGCCCNGCTCCTAATTCTGATTTCTATCTT
GTTAAAGCCCGAATTTATGCTCACTGTGGTTTGAATGTTTGAAAACGCTA
TTCCTGACCAGTAAAATCGAGGAAAAAAGGAATGAATCTTAAGACCCACA
ACTGGACAAAAGATATAAAAACCCAGTGATAGTTTTCTTTCCTTCATATT
CTTCCAAAATACAATCCTAAGACAGGTGAAACAGTTTGAAATGAAGCCTA
AAAAATCATGTGACACCTTCCATGTCAAAATCGAATGGGCGCCCAGCTGT
CTGAAAATTCAAGAAATACATGTAGAATGAAATGAAATGAAATAGAAAAT
AAAATGAAATGAAATAAACATTCTTTCTTTCCATCATTTGTAGTTCTTGA
GAAAATGACAGCGAAGAGACTGGTATTTGACCGGTTTCGACTTTATTGTC
TTTTTCAAGAATCTTCAAGAATTCTTCCTTTCCATCCTTGCAGGGTGCTG
ATCGTTGCGCAGGTCGGAGGGTTCTGGGTTTACCCCTTCATGGCGGCCAT
GAGCAACTTCCAGTTCTTCCTATTCTGCTGCTTCGTGGCGGTTATAGGAT
GCAGTTTCTACCTACTAGGGGAGTTCTGCAACAAAATCTTCTGGGGTAAG
TGCTCATTTTTTTCTTTTCATTTTTCTATTTTATTGAAATTGCAACATCG
CTATTCAATGGACAACCTAGACAGTAATAGAACACAATTATACCTTAGCA
TGAGAGTTCATCTGTGTTGGTAGAATTCATTATCAAAATTTGGGGTAAGT
CCCAATTTCTCTTGTACTGTTGGAAGAAAAGTTTAGTCTTGTTAATAACA
ATTATACCTGTAACTAAGACCTAGGTTGCATGTACACACGATAATACATC
ATAACAGTTACATATAACTTAGCCTACATTAATAGTATTAAGCTCTCATT
GTTCCTCGATGTAAACTTAACGCAAATAGTTTGGGCATTCAGTTTTGGTT
CTCTGTGATTACTAAGCAAATTCATTGTACTACATGTATGTATCATCTGA
AAGCTTATCCTTTACAATGGACTGCATATGTGAGCTAGTTCTGAGAAAAT
TCCCACCTTCATAATTATGTCATTTTATTCAGCTGAGAGAAAACTTGTTA
GAAATTACTTTATTCATTACATCCCTTAACACTATCATGGTTCTTTTACA
TTTTCAGGATCCATGGAAACGTCAAGAAAGGGGAAAAAGAGGGCATAATA
TTCTCAGCAGTAAAGGAGGAATTTTAAGATGTCTGCATATTTCCAGCACT
GTCTTAAAGGTCAATAATGATCTAATTTAACCATTCTAAAAGAAGAGAGT
TATAATCAAAAATCTGTTTTTGAAAGTTGTACAACAATGCATATATGAAA
AGTCGTATTCTATTGCCCAGTTATGCTTTTCAAATTGGAACATGAAATAC
TGCAAATTTTGAAATGTTTGCAGTGGTTTTCAGGGGACCTCTCCATTGTG
AATTGATGACATTGCAAATATCCCTGTTTCCGATGTATTACTACTGTACT
GTAAGGCCACACCAATTTGATTTCTTGGTTAACAGATTTTTATTTTCCAA
AAAATAAAAAAAACTTTGAAAAAAAAGAAGGAAAACAGAGGGCTGGCCCA
GCCTTCTGTTTTCATGATTTTTTTTTTCTAAAATTTTTTTTTTTTGGAAA
ATAAAAATCCGTTAACCAAGAAATGAAATTGGTGTGGCGGAACGGGAGAA
TGTTTTAACCACAAACTTAAACACTGCAAAAACCTCCTTTCTCCTTCTTA
TTAACAAAGTTAAGCCCCTAAAAAAATAAACAAATTTACAGTATACTGAC
TATATTGTCACCAATCTATCACTACATGATATCTTAACATTTTTGCAACA
ATCTGACAAAATAGTAAATACTTAACATATGTACAGGCAAACATTTTGTT
ATTTTCACAATTACGTATTATTTGTTTTGTTTTATATCCATATAAGTGAT
ATACAATATGCACTATTCTTTCTGGAGTCCCTATACAAATAAATAAAATT
AAACAAAAACTATACATTCAATTGGTTCGTCGATGAAGATTAGACATCCA
GGTAATAAGATACGCCAAAAAGCAATTACTCAAACAACTGGATATGATTT
TGGAAACGGTCAGACGTTTCAAGTAGCATCCACTACTTTTCGTCAGTGAC
TGTGAGCAAGATCAGTTGAACAGCAGGTTTATAACCACGAACTATGAATT
GATATGCAAATAAGGAGAAGACAAATTTTTAGATAGTCCAATAGAAAGCG
AATTAGACAACTCAAGACAAGGTTGAAGTAAAAGGGGACAATAGCTCCTA
TTGTTTTAATATAGGAGCTAAAGCTGGTTTGCCCCCAAGGCTATGTCCCA
AGTGCCAGACAGTTCCACCCTTAGCCCTCCTTTCCTGTTGAGGGTTGGAT
TGTATATCCTCTATTCAATTGGTTAACTAAGAATTCGACAAAACAAATGT
GGTGAAATCAAAAATAAACGAGAGATGAATGAGAGAGGTCAGAGGTCAAC
ATAATTGAAAACATAATCTGGATGTAGTAGACAGAAAACCAGAAGTAATC
ATAAATTACGAATATAAGTAACTTAAATTTTAAAAAAATGATTCACTCAC
AATCAGGAAGAGTACTTGAAGCACAAGCTTATCTATGCAAAAACATCTCA
CAGTCTTACCATTTCAACCTCAGGAACATTTTATACATGTACATACTTGG
TGTAGGTGAGGGGTGTGTTGTTTTATGTGTGACAAGCTGTCAATTATTTT
GTCAAAATGGTTCAATTATGTCATCAATTATGTAAAGGATCAAATTATTG
GTGTAAAAAGGTTTTGTGTTTAACTGTGAAGTTCAAGTTGCTCGTATTGA
AATCTTAGGGATTACTGGTTATTTCAATGAAGAATCATGGACTTTTATGT
GACTTGCTTCCAAAAATCACCATTTTGAGCAATGTTCAAGTAAGATGTTA
TTAGATAAGAAATTGCAGTATTTGAGCCGTGACTGTGAGATGTGAAAAAA
CACAACAATTTCCAGGGTTGAGCTATTTTAACTAATTACAATTCAAGAAC
CGTTTAAGAATATAGCTATATCTCTCAGAGAGAATACTGTCTGGCAGATT
GTGCAAGAGACTCTGATCGGGATATTTACCGGCAGAATTGGGAAATTTCG
TTGTGCATGTAAATTATTCCCTTTAAAGACAGTCAGAAATGTTCAACTTC
GATTCATGTCACTAGATTGACTTGGTATCTATGGTATCTAACATGCAACA
TAGTTTACAACACATGGTTACAAACTTCCATCACCCTAACAATAACATGC
CATCTACAAATTATTTCAAGCAAGACTATTAAAGGTGTATAAAATTCGAT
TGTTTCCCATATGTTTATTGTCTTTGTCAACCGGGCATGCCCTTAATGTA
ATTGCAGGGTAGCCCTAGCTCTATTTCTTTAGGCCGTATATATAGCCTAT
TTCAGTCATTTCCCATGTCTAACATTAACAGTCAGTGGCTTTTTCCTACC
ATAGCGTGTTATTGAAAAGCAGACAAAACAATAAAATATAATTGATACAT
TGAAACTATAAGGTGCTATACATATATCCATATTTAAGGATAAAGAGTTC
ATCTTTTTGTAAGAGACACTCACTTACTTACTCAC Coding sequence (CDS) from alignment at Sc0000044:1390139..1395123+ >transcript:BL96947_cuf9 ID=transcript:BL96947_cuf9|Name=transcript:BL96947_cuf9|organism=Branchiostoma lanceolatum|type=CDS|length=2592bp|location=Sequence derived from alignment at Sc0000044:1390139..1395123+ (Branchiostoma lanceolatum)
GTGCTGTTCCCTATGAGCATGATCGTAACAGTCGTGTTCTGGGGGATGTA
CGCCGTTGATCGAGATCTGATCTTTCCAGCGGCCCTGGACAAGATCATCC
CACCCTGGGTCAACCACGTCTGGCACACGACCGTAGTGCCTGTCCTGTTG
CTGGAGATGTACCTGGTTCACCACAGGCACCCTTCGCGTCGGGCAGGCCT
CACCGGAGCGGTCACCGTTGGGATTGTATACCTTATATGGGTGCTGATCG
TTGCGCAGGTCGGAGGGTTCTGGGTTTACCCCTTCATGGCGGCCATGAGC
AACTTCCAGTTCTTCCTATTCTGCTGCTTCGTGGCGGTTATAGGATGCAG
TTTCTACCTACTAGGGGAGTTCTGCAACAAAATCTTCTGGGGATCCATGG
AAACGTCAAGAAAGGGGAAAAAGAGGGCATGAGTGCTGTTCCCTATGAGC
ATGATCGTAACAGTCGTGTTCTGGGGGATGTACGCCGTTGATCGAGATCT
GATCTTTCCAGCGGCCCTGGACAAGATCATCCCACCCTGGGTCAACCACG
TCTGGCACACGACCGTAGTGCCTGTCCTGTTGCTGGAGATGTACCTGGTT
CACCACAGGCACCCTTCGCGTCGGGCAGGCCTCACCGGAGCGGTCACCGT
TGGGATTGTATACCTTATATGGGTGCTGATCGTTGCGCAGGTCGGAGGGT
TCTGGGTTTACCCCTTCATGGCGGCCATGAGCAACTTCCAGTTCTTCCTA
TTCTGCTGCTTCGTGGCGGTTATAGGATGCAGTTTCTACCTACTAGGGGA
GTTCTGCAACAAAATCTTCTGGGGATCCATGGAAACGTCAAGAAAGGGGA
AAAAGAGGGCATGAGTGCTGTTCCCTATGAGCATGATCGTAACAGTCGTG
TTCTGGGGGATGTACGCCGTTGATCGAGATCTGATCTTTCCAGCGGCCCT
GGACAAGATCATCCCACCCTGGGTCAACCACGTCTGGCACACGACCGTAG
TGCCTGTCCTGTTGCTGGAGATGTACCTGGTTCACCACAGGCACCCTTCG
CGTCGGGCAGGCCTCACCGGAGCGGTCACCGTTGGGATTGTATACCTTAT
ATGGGTGCTGATCGTTGCGCAGGTCGGAGGGTTCTGGGTTTACCCCTTCA
TGGCGGCCATGAGCAACTTCCAGTTCTTCCTATTCTGCTGCTTCGTGGCG
GTTATAGGATGCAGTTTCTACCTACTAGGGGAGTTCTGCAACAAAATCTT
CTGGGGATCCATGGAAACGTCAAGAAAGGGGAAAAAGAGGGCATGAGTGC
TGTTCCCTATGAGCATGATCGTAACAGTCGTGTTCTGGGGGATGTACGCC
GTTGATCGAGATCTGATCTTTCCAGCGGCCCTGGACAAGATCATCCCACC
CTGGGTCAACCACGTCTGGCACACGACCGTAGTGCCTGTCCTGTTGCTGG
AGATGTACCTGGTTCACCACAGGCACCCTTCGCGTCGGGCAGGCCTCACC
GGAGCGGTCACCGTTGGGATTGTATACCTTATATGGGTGCTGATCGTTGC
GCAGGTCGGAGGGTTCTGGGTTTACCCCTTCATGGCGGCCATGAGCAACT
TCCAGTTCTTCCTATTCTGCTGCTTCGTGGCGGTTATAGGATGCAGTTTC
TACCTACTAGGGGAGTTCTGCAACAAAATCTTCTGGGGATCCATGGAAAC
GTCAAGAAAGGGGAAAAAGAGGGCATGAGTGCTGTTCCCTATGAGCATGA
TCGTAACAGTCGTGTTCTGGGGGATGTACGCCGTTGATCGAGATCTGATC
TTTCCAGCGGCCCTGGACAAGATCATCCCACCCTGGGTCAACCACGTCTG
GCACACGACCGTAGTGCCTGTCCTGTTGCTGGAGATGTACCTGGTTCACC
ACAGGCACCCTTCGCGTCGGGCAGGCCTCACCGGAGCGGTCACCGTTGGG
ATTGTATACCTTATATGGGTGCTGATCGTTGCGCAGGTCGGAGGGTTCTG
GGTTTACCCCTTCATGGCGGCCATGAGCAACTTCCAGTTCTTCCTATTCT
GCTGCTTCGTGGCGGTTATAGGATGCAGTTTCTACCTACTAGGGGAGTTC
TGCAACAAAATCTTCTGGGGATCCATGGAAACGTCAAGAAAGGGGAAAAA
GAGGGCATGAGTGCTGTTCCCTATGAGCATGATCGTAACAGTCGTGTTCT
GGGGGATGTACGCCGTTGATCGAGATCTGATCTTTCCAGCGGCCCTGGAC
AAGATCATCCCACCCTGGGTCAACCACGTCTGGCACACGACCGTAGTGCC
TGTCCTGTTGCTGGAGATGTACCTGGTTCACCACAGGCACCCTTCGCGTC
GGGCAGGCCTCACCGGAGCGGTCACCGTTGGGATTGTATACCTTATATGG
GTGCTGATCGTTGCGCAGGTCGGAGGGTTCTGGGTTTACCCCTTCATGGC
GGCCATGAGCAACTTCCAGTTCTTCCTATTCTGCTGCTTCGTGGCGGTTA
TAGGATGCAGTTTCTACCTACTAGGGGAGTTCTGCAACAAAATCTTCTGG
GGATCCATGGAAACGTCAAGAAAGGGGAAAAAGAGGGCATGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| Sc0000044 | genome | Sc0000044:1390139..1395123 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL96947_cuf9 |
| Biotype | protein_coding |
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