transcript:BL96858_cuf3 (mRNA) - B. lanceolatum

Overview
Nametranscript:BL96858_cuf3
Unique Nametranscript:BL96858_cuf3
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

protein sequence of transcript:BL96858_cuf3

>transcript:BL96858_cuf3-protein ID=transcript:BL96858_cuf3-protein|Name=transcript:BL96858_cuf3|organism=Branchiostoma lanceolatum|type=polypeptide|length=286bp
APQTTMAKTTSPLTTESLTTKLLTTMMPTKAMTTQEPPKPKVFNGVFRIT
EGVNFTDNLSNKTSPAFMNLENTIKPLLENVYRTRYGSQFDEVVINEFRS
GSVVVDYDVVLAPSATDVTAAEVQDTFIQALNNGTQLGDFEIDPASVEIT
EATTIPPTTAPQEFVLPQWAIIVIIVGVVVVFLLLVIIFALCVRRSRRNS
MKGNMYAINEDGRKESLLWMHKKDANGFHGSVVGEGRHDGKTTAQEMREM
RSHPSELPLNGTTPINGYGELNYGYVLNAEDNDTYL
Run BLAST on NCBI

mRNA from alignment at Sc0000007:5490596..5503306+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>transcript:BL96858_cuf3 ID=transcript:BL96858_cuf3|Name=transcript:BL96858_cuf3|organism=Branchiostoma lanceolatum|type=mRNA|length=12711bp|location=Sequence derived from alignment at Sc0000007:5490596..5503306+ (Branchiostoma lanceolatum)
CAGCTCCTCAAACGACAATGGCAAAAACTACTTCACCCTTAACCACAGAA TCACTGACGACCAAGCTGTTGACCACAATGATGCCAACGAAGGCAATGAC TACACAAGAACCACCAAAACCCAAAGTCTTTAACGGAGTCTTTCGCATCA CTGAAGGTACATCATTAGTCTTCGGGCAAGAATTTGCAATAAACCTATTA TTACAATTGATACATGTAGTTGTTTAGTGTTCAGTATCTACACCATTGAA ACGTCAGCCCCTCAAGTGTGAAGTTACATTTCGAGCAGATATTGTACTCT TAAAACTTTAAGAGTTTTCCCCCGATTTGTTCTTTCTTTAAGAACCTTAA AAGTCAACTCCCTTTGCTCTGATCAATAGAAAAATGTTCCGGATGAGTTG AGACCCATTCTCAATCCTACATGTATCTGTTTTTTCATAGGAGTCAACTT CACAGACAATCTCAGTAACAAGACATCTCCTGCCTTCATGAATCTGGAAA ACACTATCAAGCCCCTGGTAAGTGACCATTACAGTCATGTTTACAAACAT TCGAGTTGTTGCAGAATGCAACTTAGTTCTAAACTATTGTGGCAACTATT TGTACATACTGTCCTTGTTGCACAACCAAATGCTTGCCAACATTTCGGTA GTCGTTCTGCTACTTTCCTCATGCCAATACAGGTTCTACTTCCCACTGTT CATGCTAATCATGGACATTGTGCATACTTATTAGTTTAACACTGAATTTA TCTGTTTCTTCAATTCACAGCTGGAGAATGTGTACAGGACTCGGTACGGT AGTCAGTTTGATGAGGTGGTCATCAACGAATTCAGGTGAGGAAATTCATG CATGGAATGGCGTTGAATTTATTTCTATCAAACATATATAGGGTGGATGT GTAATCCTATAGCATTGAGGGCAGCAACATTATTTCTAAAAGACCTACCT CACTCCATTCAGGTGTAAATGGATACCTGATTTCGTTGGGAGAGGGATAA AAAGGCTATGGGGCCTTTACCTTTCTAAAGAATTGTCAAAAATCAGAAAA CAACAGAGAAGTTTGCTTTACAGTCTTTTGATAACTTTCTGAGGAAGACA AGCGAACATTTGCTGGCAATAGTTTTTCTACTTTAGGCTAAATTTGAATT CTTAAGTGTAATAAAAGTACAATGTCATGGCGTTGAAATGGTCAGCTTCA TGTTTTCCCTACAGGAGCGGTAGCGTGGTGGTTGACTATGACGTTGTCCT AGCGCCTAGCGCCACGGACGTAACAGCAGCAGAAGTGCAGGACACGTTCA TTCAGGCCCTTAACAACGGCACACAACTTGGTGACTTTGAAATAGACCCT GCATCTGTAGAAATCACAGGTAAGTGCAAGTTTGACGACAGGAACATTTG ACTGTGAGCTTGGGTGTCTAAAGCAAATGATAAACAATCTTTCCCAGGCG TATGAGATTATAAACCCGGCCCATCCAATTTTGTGTGCATTTTTCTCAAG TTTATTAACCACGTTCACTCTAGACCTTCACTCGCTCTAATCATCCACGA TATTTCAAAGTGTCTTATAAATGAGCGCCAATATCTTAAATAGAATTGTG TTAGTATATATATACCTCTCCATTCATATCTATCCCCATGGTCGTCATAT GAAAATAAATGCCCATGCCATATTGTCTTGTCTTTCCCTTTCCACAGAAG CTACCACTATCCCGCCAACAACAGCCCCGCAGGAGTTTGTGCTACCACAG TGGGCCATTATAGTCATCATTGTTGGCGTGGTGGTGGTGTTCTTACTCTT AGTCATCATCTTCGCGGTAAGTATAAAAGGAAAAAAATGTCTCCGTCCCC GAGGCGTAGCAAAAAAATGTTTTGAAAAATACTGCAAGAATGTCAGAGGT TTTAAGCCATTTGCTTGCAATACTGAAGCAAAACTTGGAGTTTAGATAGT ATCACATCCATGATGTATCCATGGAAGGCAGAATGCATGTGAAGTAGCAT TAATGTCCGTTTGGAAAGCCTTATGATTATAGTAACACATTGTACTTCAA TTGCCAGATGATCATAATGCAGAGGCACTAGCTCAGACTTGACTTTGGCA CGGTTTACACACGCGTCTCCAAGTACATGCAGAGCACACTCAAAGTGTGA GTACTCCGTCTCGGAGCACACTCAGCTGCAGAGTGTGCTCGGAATACACT TGGAGCACACTCAGTCAGAATGTGCTTGAAAATGCGTGAGTAAACCCAGC ATGTAACGTCAATACCATATCCAGATGCTGACGTTCTTTCAATATCATTA CAGCTGTGTGTAAGAAGATCGCGGAGAAACAGCATGAAGGGGAACATGTA TGCTATCAACGAGGACGGCAGGAAAGAGTCTCTACTCTGGATGCACAAGA AAGACGCCAACGGTTTCCATGGCTCTGTTGTGGGCGAAGGGAGGCATGAT GGGAAGACTACCGCTCAAGAGATGAGGGAGATGAGAAGCCACCCTTCTGA GCTGCCATTGGTCAGTAGTAAAACATGTGACTTTACGTCACATTACTTTC TGAGCTGCAATTGGTCATAAGTAAAACATGTGACTTTGATTCCCATTTTC TGATTTGCCATTGTTCGTAGCAAAACTTGTGACTTTCCTTCACATCATTT TCTGTGTTGCCATTGGTCGTAGCAAAACATGTGACTTAGCTTCAAATCAT TTTCTGATCTGCTATTGGTCAGTAGTGTATCATGTCAGTTTGCTTCACAT TAATGATGTACATGTAGACTTTACAATTTCGTTGTGAATATCATTCTTAA TATGATTGAAAACTTTCAGAAGTTATAATTTGGCTATCGGATATGATACA CATATAGAACAAGCAGTCGTTGACTCAATCTTTTTTATTCCTTTATACAG AATGGTACCACCCCAATCAACGGCTATGGCGAGCTCAATTACGGTTACGT TTTGAATGCAGAGGACAACGACACATATCTCTGAGACAACTGCGGTTCTT ACCATAGATGAATGCAACGTCCGAGATTCTTAACAAAAGTCAAACTCTGC TAGCCTGGAATCCAGCCCCAGTTTGCTGCTCTGATTGCTTTAATGCTGAA TAGTCTGTTACCCGATAATAGAGCAATGAGTGCAAGACTATTGTGCAGGA AAACGATCAGAGGAGCAAACCCAGACTAGAATAGGGTGGATTCTAGGCTA AGACTTTTAAGTGTACTACAGTACAAGATGCTGCTGAAGACTTATTTGAC ACCCCCGTCAGAGATTTGGTTTTACCTACTTTTTCAGTATTAGAAATTGT TACGAAGATTCCATGTTAAATTTATGGGGTGTTTTTGTCACAATGTGATT TTCAACCTTTCAATACTAAGATGTACCTCTTATATATTGTACAGTGTATT TTATCTACATGCAGGTTTTCTGTAGTATGGAAAGTTCCTGTTATAAGGTT GGTATAAAGAAATATATACTAGCAAATAGTGTTAAACTTCTGTGCAAAGT AACCAATTTCAATGATAGAGAATTGATTAAAATCAATATGCATGAATGTA CTAAGTAGAATTTGTAATCATATTATTTTAGACATTGCTGAATATGAAAG AAAAAAATGGTATATTTTGACTTGAGATTACTTGACAAAAACACTTTTTG AGCTGGACTCATCAACATATAGCAATTGTAGCATTCTAACTTCTTCATGT TGAGACATGAATTTTCTATGTAAAGCTTTTGACAAAAATTTCTCTATCAT GCAGTTAATATAAATATAAGCGCATCGCTAAAAGGAAAAANCAGTTAATA TAAAAATAAGCACTTTGCTAAAAATAAGAAAAAATCTAAGACAGTTTGTA CAGTTTCATATCAACCATATTAGTAACATATCTTGAGAACTATTATATTT TTCGTCAAACAACCTACTTTTTACTAGGATGTGAAAAAGGCAAACATTGT GCCAAGATATCATTTGGGCTCATGTAATTTCATCACACCATTTTAACCTT TGTCCTACTGTAAAACCTGAGAACAAACTGTGTCAAAACGCTTCCTCAGC ACTGTGATGGTTAAAGAATTTTGAACCTTGGTGATATATATGGCATCTCA CGTTTATACATATCGAAACAACTACTATTAATATATTGTTAAGCAGCTAC ATGTGTAAATGATTTATCTAACATTTATTATGCAAACCGCTTTGGAAAGG CAACAAAATATGTTTCAAGATAATCTTAGTAAGAAATCTGTTCTAATTGT AATATGTATTGTGTTTATTTTTGCCTTATGATGTATAGTCTATTTTGTAC ATTTATGTATCAAACAGAATACAAACGTCAGTCATGACAACAAAGTGGGG TTTGCTTTATTTACATAAGCAAGATATACATTTATATAGCTAGTCCAAAT GAATAAGGAAGAAAAATCCCAAATAAAAAAACAGAGAAATTAAACACTCT CTTCCATAAGGTTTAGAGAAAAATGGGGATATCTATGGAAAAATTCACAC AAAAATTGACTTCACAATAAAAGCAAATTCAACATGTACTGACTATACAT CGGATCACTAAAATTACCTTTGTTCCCAAAATCTAAGACACAAACATATT ACAAGTACAAATTTAAAAAGAGAATTCATGTGAAAATGTAAGTTGTTATC ATAATCATTATACTTCTCAAAGATTCTTTTGATCAAAATCAGGATTCTAA TATCAAAAGAAAACAGATGATGAAATTGGTATAACTTAGAAGCTGTAATT ACAATTAGAATTACTTGAAAAAAATTGATTCTTTGGCCTGTACATTAACT CCTAGAAAATTGAATAAACACGCTCTGTATGCTGAAGTATTTTGATGGCA AATGTTTTTGCCAAAATCATCAAAAATAGTTGTCATTTTTTTAGAACTAA TCTGTAATTATACAGAAGCTATAGTTCTGATGGTCTATCTTTATATTACA GTTGTAATTAAACTTCATATTTCAATATTCTCTTTGGGATGAAAAATCAG AGAGCCAGATTTTAAAAATCATTCCTAATCAATTGATTATAAAGGTGATC ATAGACTCGAAAATCATTAGTGAAAATCCAAGTATGTGCTATGGTAGCAT CTAGTGCATTGATGCCCTAGTAGATAATGTATGGCTAAATAGATATGTAA TGCTTGTATGTTGATCTATATATGAAGAATGAATTCATTCCTAGAATGTA CTTCATTGCTTATTTGACATACAAATGTAGTGTAACAAAATGCTTTTCAG GCCATGATTTCTAATGCAACATACCAGCAAATCTTAAAAACTAAACTCCA AGAAAAAAAATCATTCCAAATGTAAAATCATGATAGTGTTATTCATGTTC AATTCTGTCTCTAGCAAGTGTGTTGAGTGTTCGCAAAGCAGCAATGATTC AAGTGCGTAAATTTGGTATTTTCTTTACAGGATACCTGTACGTTATCACT CTGCTTGTCGCCATGTTTGTATCTCTTTTGTGCATATCAGAAGAAATGTA GTATTTGACGATAAAACATAAAAATTCTGTTTTTGCTATAAGAATGCAAA TAGGGACACCAATATGGCTTCGCCACCAATCAGTGGCCTTGAGTATACTG TAAATGCAGAAATGTTTGCGGTGGTTTTATGGTCGCAGTTTTTGCAGCGA CCGTACCACCACGAACAATAAACCATGTACCAGCGCATACATTTTTGTCC AACACTGTAGGAGTATGTGACTATAGCGTCTCTGTGGACTTAAGAGTCAT TGCATGAGAAAACCAGGCAGAGGTGGGAAGATGGGGGTCGGCCAAATCGG CTCATACTTTGTATGTGTGATAGGTATGTTGAACTATGAACAGCCATATA ATTAAAACCCTCCAGCTATTTTTCGTTATGGCGTTCTGGGACCCCCCTCC GAGACCCTCAAAAATCCAACAATTTATGGCTGAAAATTACTGAAATTGCA ATGGCTACCCTGACAATTCTGATTAAGATACGATTATAAATTTTATATTT CCATATAGCATGGGTTCCCTAGTTTCACCTACCAAAAGTTGAAGGTGAAG CATTGAAGTTATGAGGGTGTACTAGGGGGTTACCAGAACCAATGAAAGCA GAATTTTCATCTCTTTGAATTTTAGTCATTTTCAAGGGGCATTATCTGCC CTGGGCAGTGGCTTTGGAGAATGGTTTTACTGTTGCTGGAGAGAGGAACA TCTACTGATTCAAAAACAAGCGTCGTNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNTGTAAAGAAACTTGTGTCACCTCACAGAGGATG AAATGAATGTAATAATACAAAATACAACTGTTGCCATCATCTATCATTTG TGAGAAACGAACATCTGCAAACGCGCCAAATGTGAAAGGCTGAATGCCTT GAAGCTGATAGGAGTGACGCATCGCAATTTCCACGTACTTGCCACTTGTC ACTAATACGACCAGTATACGGCCGCGGGAAAGCCTCCTACATCTGCGCAC CTGCACATTTTGGGCTGTTTCTATGGACTTTTCTTTGTTATGAAGCATTG ACTTTTAGCAATGCACTATCATCTGTATTACGGCAATAATACATACAAAG AATTTCAGTGATGCCCTTAACTTTTTTCAATCTTTGAGATTTCACATTAC ATTCCCATAACATTGTCAACATTGACAACCTCTAACCGCCTGCAGCAAAT GCATGTTTTGGTGTTGTTGTTTTTTTTTTAATTAAATGCTGTTAGTTTTG ATACTGTATTGGTTAAACAATATTCAAAACTATTCCAATTGTAGCATAGT ATACATAACCACTTAGTTCCCAAGTACCTGGCTTTCCTGCTAGCCAATAC CCAGGTGCCTTGTATTGCATGAATTGTGTGTATTGTGTTATTTTAGATTT TTTAGATGGGTAAAAGAGATTGAAATTACTAGTTACAGTCATTGGCTGAG TTCTTCGAGAATGCTTGATACCAAATATATAATGTTCTTTGAAATGGAAC AATTGCAACTGCAATGTACAATCTGTTGATTTCATTATGATTCATGTACT GACCCAAACTTATAAGTATATATATACAGTCAAACTTGCATCCAACAACC AGTCAAGGGACCAAGGAAATGTGGTTGTTGACTGGAGTTGGCTGTTGGAT AAAACTCGGGTCGGTTTGCTGATTTTGTGGGCATAAATGAGGCTGCATAA ATACTTAGCACGTATAGCACTTATCTGCCTGCTCTGCATATAAAATTACA AGACAAGTGAAGAAATACAGTATATACCAGAAAAAACAAACTAAACTGTT GTTGTCTACAAGACTACAATGCACTGTTGATTACATTGCCAATAAACGTT AACATGACAAAAGATTTTTTGGGTACATGTACAAAACCTTTGTTGTACTT ATAATGAATGATTACATAGAGNTAGAGCGCAAATGAACATTTCTGATTTG TGCTAGCATTTTATGACAATTCTGCATGGTTTTCACCCAGCGGCAGAAAA AATTGCCATAACTTACCCCGTAGTGAGACGTCACAACCTGATTTATTATA GCCCCAAACCCGAAAAATCTCCATAAAGAGCCCCCATTCACGGCTCGCGT TATATGTATCCCAATTAAACGACGCTTGTTTTTGCATCAGTAGATGTTCC TCTCTCCAGCAACAGTAAAACCATTCTCCAAAGCCACTGCCCAGGGCAGA TAATGCCCCTTGAAAATGACTAAAATTCAAAGAGATGAAAATTCTGCTTT CATTGGTTCTGGTAACCCCCTAGTACACCCTCATAACTTCAATGCTTCAC CTTCAACTTTTGGTAGGTAAAACTAGTGAACCCATGCTATATGGAAATAT AAAATTTATAATCGTATCTTAATCAGAATTGTCAGGGTAGCCATTGCAAT TTCAGTAATTTTCAGCCATAAATTGTTGGATTTTTTAGGGTCTCCTAGGG GGGTCCGTGAACGCCATAACGAAAAATAGCTGGAGGGTTTTAATTATATG GCTGTTCATAGTTCAACATACCTATCACACATACAAAGTATGAGCCGATT TGGCCGACCCCCATCTTCCCACCTCTGCCTGGTTTTGCCTGGTTTTCTCG TGCAATGACTCTTAAGACCACCATCAACACTCCATTTTGCCTTAGTGCGA ATAAAAACCACATGAACTTAAATGTATGTAGTATCTCACTCAGATATCTA GTTCGTTTCTCTATAAACAGCTCCCAGGTATATAGACCCATCCCATAGCC CCGCCCACATTCGTGAAAATATAGAAATGCAAAAGAAAAACATAAAAAAT GCAAATAATTGAAGGACTCGTAGCCACTCTCTTATCAGTCAAACCAGTAT CTGTCATTCTCTCATTGCTCAAATTGCTAATTGCTATTCCCTCATTGGCC AAACTGAAACTGCCATTCTCTCATTGGTTGAACTGATAATTTCCATTCTC TCATTGGCTGAACTGATAATTGCCATTCTCTCATTGGTTGAACTGATAAT TGTGATGGACGGTCAGGATCGGAATATTGGACAGTGAGCCATAAGAAGAG CAAACTGGAGCTATAATAGGATGGATGGTTTAGTTTATTCAAAAATTTCT CTATCATGCAGTTAATATAAAAATAAGCACTTTACTAAAAAGAAGAAAAA AAATCTAAGACAGTTTGTACAGTTTCATATCAACCACATTAGTAACATAT CTCGAGAACTATTATATTTTCGTTTAACAACCTACTTTTTACTAGGATGT AAAAAAAGGCAAACATTGTGTCAAGATATCATTTGGGCTCATGCAATTTC TTCATAACATTTTAACCTTTGTCCTGCTGTGAAACCTGAGAACAAACTGT GTCAAAACGCTTCCTCAGCACTCTGAAGGTTAAAGAATTTTGAACCTCAG TGATATATATGGCATCTCACGTTTATATATATCGAAACAACTACTATTAA TATATTGTTAAGCAGCTACATGTATAAATGATTTATCTAACATTTATTAT GCAAACCGCTTTGGAAAGGCAACAAAATATGTTTCAAGATACTCTTAGTA AGAAATCTGTTCTAAGATTGTAATATCTATTGTGTTCATTTTTGCCTTAT GATGTATAGTCTATTTTGTACATTTATGTATCAAACAGAATACAAAAGTC AGTCATAACAACAATGTGTTGTTTATTTACATGTTTTAACATGGGCAAGA TATACAGTTATTTAGCTAGTCCAAATGAATGAGGAAGAAAAATCCCAAAT ACTTAAGTCATAAAAACTTAACACTCTCTTCCATAAGTTTTAGAGAAAAA TGGGGATATCTATGGAAAAATTCACACAAAAATTGACTTCACAATAAAAG CAAATTCAACATGTTCTGCATGACTTTACATCGGATCACTAAAATTACCT TTGTTCGCAAAATCAAAGACACAAACATATTACAATTTCAAAAAGAGAAT TCATATGAAAATGTAAGTTGTTATCATAATTATAATCCTCAAAGATTATT TTAATGAAAATCAGGATTCTAATTCTAAAAATTAGAATTACTTCAGAGAA ATCAATTCTTTAGCCTGTACATTAACTCCTAGAAAATTGAATAAACACAC ACAGTGTATTTTGATGGCCAACGTATTTGCCAAAATCAGCAAAAATAGTT ATCTTTTTAGAACTAATCTGTAATAGAGAAGCTACAGTTCAGATGGTTTA TCTTTATATTACAGTTGCAATTAAACTTCATAAACGATATTCTCTTTGGG ATGAAAAAAAC

Coding sequence (CDS) from alignment at Sc0000007:5490596..5503306+

>transcript:BL96858_cuf3 ID=transcript:BL96858_cuf3|Name=transcript:BL96858_cuf3|organism=Branchiostoma lanceolatum|type=CDS|length=6027bp|location=Sequence derived from alignment at Sc0000007:5490596..5503306+ (Branchiostoma lanceolatum)
GCTCCTCAAACGACAATGGCAAAAACTACTTCACCCTTAACCACAGAATC
ACTGACGACCAAGCTGTTGACCACAATGATGCCAACGAAGGCAATGACTA
CACAAGAACCACCAAAACCCAAAGTCTTTAACGGAGTCTTTCGCATCACT
GAAGGAGTCAACTTCACAGACAATCTCAGTAACAAGACATCTCCTGCCTT
CATGAATCTGGAAAACACTATCAAGCCCCTGCTGGAGAATGTGTACAGGA
CTCGGTACGGTAGTCAGTTTGATGAGGTGGTCATCAACGAATTCAGGAGC
GGTAGCGTGGTGGTTGACTATGACGTTGTCCTAGCGCCTAGCGCCACGGA
CGTAACAGCAGCAGAAGTGCAGGACACGTTCATTCAGGCCCTTAACAACG
GCACACAACTTGGTGACTTTGAAATAGACCCTGCATCTGTAGAAATCACA
GAAGCTACCACTATCCCGCCAACAACAGCCCCGCAGGAGTTTGTGCTACC
ACAGTGGGCCATTATAGTCATCATTGTTGGCGTGGTGGTGGTGTTCTTAC
TCTTAGTCATCATCTTCGCGCTGTGTGTAAGAAGATCGCGGAGAAACAGC
ATGAAGGGGAACATGTATGCTATCAACGAGGACGGCAGGAAAGAGTCTCT
ACTCTGGATGCACAAGAAAGACGCCAACGGTTTCCATGGCTCTGTTGTGG
GCGAAGGGAGGCATGATGGGAAGACTACCGCTCAAGAGATGAGGGAGATG
AGAAGCCACCCTTCTGAGCTGCCATTGAATGGTACCACCCCAATCAACGG
CTATGGCGAGCTCAATTACGGTTACGTTTTGAATGCAGAGGACAACGACA
CATATCTCTGAGCTCCTCAAACGACAATGGCAAAAACTACTTCACCCTTA
ACCACAGAATCACTGACGACCAAGCTGTTGACCACAATGATGCCAACGAA
GGCAATGACTACACAAGAACCACCAAAACCCAAAGTCTTTAACGGAGTCT
TTCGCATCACTGAAGGAGTCAACTTCACAGACAATCTCAGTAACAAGACA
TCTCCTGCCTTCATGAATCTGGAAAACACTATCAAGCCCCTGCTGGAGAA
TGTGTACAGGACTCGGTACGGTAGTCAGTTTGATGAGGTGGTCATCAACG
AATTCAGGAGCGGTAGCGTGGTGGTTGACTATGACGTTGTCCTAGCGCCT
AGCGCCACGGACGTAACAGCAGCAGAAGTGCAGGACACGTTCATTCAGGC
CCTTAACAACGGCACACAACTTGGTGACTTTGAAATAGACCCTGCATCTG
TAGAAATCACAGAAGCTACCACTATCCCGCCAACAACAGCCCCGCAGGAG
TTTGTGCTACCACAGTGGGCCATTATAGTCATCATTGTTGGCGTGGTGGT
GGTGTTCTTACTCTTAGTCATCATCTTCGCGCTGTGTGTAAGAAGATCGC
GGAGAAACAGCATGAAGGGGAACATGTATGCTATCAACGAGGACGGCAGG
AAAGAGTCTCTACTCTGGATGCACAAGAAAGACGCCAACGGTTTCCATGG
CTCTGTTGTGGGCGAAGGGAGGCATGATGGGAAGACTACCGCTCAAGAGA
TGAGGGAGATGAGAAGCCACCCTTCTGAGCTGCCATTGAATGGTACCACC
CCAATCAACGGCTATGGCGAGCTCAATTACGGTTACGTTTTGAATGCAGA
GGACAACGACACATATCTCTGAGCTCCTCAAACGACAATGGCAAAAACTA
CTTCACCCTTAACCACAGAATCACTGACGACCAAGCTGTTGACCACAATG
ATGCCAACGAAGGCAATGACTACACAAGAACCACCAAAACCCAAAGTCTT
TAACGGAGTCTTTCGCATCACTGAAGGAGTCAACTTCACAGACAATCTCA
GTAACAAGACATCTCCTGCCTTCATGAATCTGGAAAACACTATCAAGCCC
CTGCTGGAGAATGTGTACAGGACTCGGTACGGTAGTCAGTTTGATGAGGT
GGTCATCAACGAATTCAGGAGCGGTAGCGTGGTGGTTGACTATGACGTTG
TCCTAGCGCCTAGCGCCACGGACGTAACAGCAGCAGAAGTGCAGGACACG
TTCATTCAGGCCCTTAACAACGGCACACAACTTGGTGACTTTGAAATAGA
CCCTGCATCTGTAGAAATCACAGAAGCTACCACTATCCCGCCAACAACAG
CCCCGCAGGAGTTTGTGCTACCACAGTGGGCCATTATAGTCATCATTGTT
GGCGTGGTGGTGGTGTTCTTACTCTTAGTCATCATCTTCGCGCTGTGTGT
AAGAAGATCGCGGAGAAACAGCATGAAGGGGAACATGTATGCTATCAACG
AGGACGGCAGGAAAGAGTCTCTACTCTGGATGCACAAGAAAGACGCCAAC
GGTTTCCATGGCTCTGTTGTGGGCGAAGGGAGGCATGATGGGAAGACTAC
CGCTCAAGAGATGAGGGAGATGAGAAGCCACCCTTCTGAGCTGCCATTGA
ATGGTACCACCCCAATCAACGGCTATGGCGAGCTCAATTACGGTTACGTT
TTGAATGCAGAGGACAACGACACATATCTCTGAGCTCCTCAAACGACAAT
GGCAAAAACTACTTCACCCTTAACCACAGAATCACTGACGACCAAGCTGT
TGACCACAATGATGCCAACGAAGGCAATGACTACACAAGAACCACCAAAA
CCCAAAGTCTTTAACGGAGTCTTTCGCATCACTGAAGGAGTCAACTTCAC
AGACAATCTCAGTAACAAGACATCTCCTGCCTTCATGAATCTGGAAAACA
CTATCAAGCCCCTGCTGGAGAATGTGTACAGGACTCGGTACGGTAGTCAG
TTTGATGAGGTGGTCATCAACGAATTCAGGAGCGGTAGCGTGGTGGTTGA
CTATGACGTTGTCCTAGCGCCTAGCGCCACGGACGTAACAGCAGCAGAAG
TGCAGGACACGTTCATTCAGGCCCTTAACAACGGCACACAACTTGGTGAC
TTTGAAATAGACCCTGCATCTGTAGAAATCACAGAAGCTACCACTATCCC
GCCAACAACAGCCCCGCAGGAGTTTGTGCTACCACAGTGGGCCATTATAG
TCATCATTGTTGGCGTGGTGGTGGTGTTCTTACTCTTAGTCATCATCTTC
GCGCTGTGTGTAAGAAGATCGCGGAGAAACAGCATGAAGGGGAACATGTA
TGCTATCAACGAGGACGGCAGGAAAGAGTCTCTACTCTGGATGCACAAGA
AAGACGCCAACGGTTTCCATGGCTCTGTTGTGGGCGAAGGGAGGCATGAT
GGGAAGACTACCGCTCAAGAGATGAGGGAGATGAGAAGCCACCCTTCTGA
GCTGCCATTGAATGGTACCACCCCAATCAACGGCTATGGCGAGCTCAATT
ACGGTTACGTTTTGAATGCAGAGGACAACGACACATATCTCTGAGCTCCT
CAAACGACAATGGCAAAAACTACTTCACCCTTAACCACAGAATCACTGAC
GACCAAGCTGTTGACCACAATGATGCCAACGAAGGCAATGACTACACAAG
AACCACCAAAACCCAAAGTCTTTAACGGAGTCTTTCGCATCACTGAAGGA
GTCAACTTCACAGACAATCTCAGTAACAAGACATCTCCTGCCTTCATGAA
TCTGGAAAACACTATCAAGCCCCTGCTGGAGAATGTGTACAGGACTCGGT
ACGGTAGTCAGTTTGATGAGGTGGTCATCAACGAATTCAGGAGCGGTAGC
GTGGTGGTTGACTATGACGTTGTCCTAGCGCCTAGCGCCACGGACGTAAC
AGCAGCAGAAGTGCAGGACACGTTCATTCAGGCCCTTAACAACGGCACAC
AACTTGGTGACTTTGAAATAGACCCTGCATCTGTAGAAATCACAGAAGCT
ACCACTATCCCGCCAACAACAGCCCCGCAGGAGTTTGTGCTACCACAGTG
GGCCATTATAGTCATCATTGTTGGCGTGGTGGTGGTGTTCTTACTCTTAG
TCATCATCTTCGCGCTGTGTGTAAGAAGATCGCGGAGAAACAGCATGAAG
GGGAACATGTATGCTATCAACGAGGACGGCAGGAAAGAGTCTCTACTCTG
GATGCACAAGAAAGACGCCAACGGTTTCCATGGCTCTGTTGTGGGCGAAG
GGAGGCATGATGGGAAGACTACCGCTCAAGAGATGAGGGAGATGAGAAGC
CACCCTTCTGAGCTGCCATTGAATGGTACCACCCCAATCAACGGCTATGG
CGAGCTCAATTACGGTTACGTTTTGAATGCAGAGGACAACGACACATATC
TCTGAGCTCCTCAAACGACAATGGCAAAAACTACTTCACCCTTAACCACA
GAATCACTGACGACCAAGCTGTTGACCACAATGATGCCAACGAAGGCAAT
GACTACACAAGAACCACCAAAACCCAAAGTCTTTAACGGAGTCTTTCGCA
TCACTGAAGGAGTCAACTTCACAGACAATCTCAGTAACAAGACATCTCCT
GCCTTCATGAATCTGGAAAACACTATCAAGCCCCTGCTGGAGAATGTGTA
CAGGACTCGGTACGGTAGTCAGTTTGATGAGGTGGTCATCAACGAATTCA
GGAGCGGTAGCGTGGTGGTTGACTATGACGTTGTCCTAGCGCCTAGCGCC
ACGGACGTAACAGCAGCAGAAGTGCAGGACACGTTCATTCAGGCCCTTAA
CAACGGCACACAACTTGGTGACTTTGAAATAGACCCTGCATCTGTAGAAA
TCACAGAAGCTACCACTATCCCGCCAACAACAGCCCCGCAGGAGTTTGTG
CTACCACAGTGGGCCATTATAGTCATCATTGTTGGCGTGGTGGTGGTGTT
CTTACTCTTAGTCATCATCTTCGCGCTGTGTGTAAGAAGATCGCGGAGAA
ACAGCATGAAGGGGAACATGTATGCTATCAACGAGGACGGCAGGAAAGAG
TCTCTACTCTGGATGCACAAGAAAGACGCCAACGGTTTCCATGGCTCTGT
TGTGGGCGAAGGGAGGCATGATGGGAAGACTACCGCTCAAGAGATGAGGG
AGATGAGAAGCCACCCTTCTGAGCTGCCATTGAATGGTACCACCCCAATC
AACGGCTATGGCGAGCTCAATTACGGTTACGTTTTGAATGCAGAGGACAA
CGACACATATCTCTGAGCTCCTCAAACGACAATGGCAAAAACTACTTCAC
CCTTAACCACAGAATCACTGACGACCAAGCTGTTGACCACAATGATGCCA
ACGAAGGCAATGACTACACAAGAACCACCAAAACCCAAAGTCTTTAACGG
AGTCTTTCGCATCACTGAAGGAGTCAACTTCACAGACAATCTCAGTAACA
AGACATCTCCTGCCTTCATGAATCTGGAAAACACTATCAAGCCCCTGCTG
GAGAATGTGTACAGGACTCGGTACGGTAGTCAGTTTGATGAGGTGGTCAT
CAACGAATTCAGGAGCGGTAGCGTGGTGGTTGACTATGACGTTGTCCTAG
CGCCTAGCGCCACGGACGTAACAGCAGCAGAAGTGCAGGACACGTTCATT
CAGGCCCTTAACAACGGCACACAACTTGGTGACTTTGAAATAGACCCTGC
ATCTGTAGAAATCACAGAAGCTACCACTATCCCGCCAACAACAGCCCCGC
AGGAGTTTGTGCTACCACAGTGGGCCATTATAGTCATCATTGTTGGCGTG
GTGGTGGTGTTCTTACTCTTAGTCATCATCTTCGCGCTGTGTGTAAGAAG
ATCGCGGAGAAACAGCATGAAGGGGAACATGTATGCTATCAACGAGGACG
GCAGGAAAGAGTCTCTACTCTGGATGCACAAGAAAGACGCCAACGGTTTC
CATGGCTCTGTTGTGGGCGAAGGGAGGCATGATGGGAAGACTACCGCTCA
AGAGATGAGGGAGATGAGAAGCCACCCTTCTGAGCTGCCATTGAATGGTA
CCACCCCAATCAACGGCTATGGCGAGCTCAATTACGGTTACGTTTTGAAT
GCAGAGGACAACGACACATATCTCTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
gene:BL96858gene:BL96858Branchiostoma lanceolatumgene
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
transcript:BL96858_cuf3transcript:BL96858_cuf3-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
BL96858_cuf3-E1BL96858_cuf3-E1-1564476830-78434Branchiostoma lanceolatumexon
BL96858_cuf3-E2BL96858_cuf3-E2-1564476830-78436Branchiostoma lanceolatumexon
BL96858_cuf3-E3BL96858_cuf3-E3-1564476830-78438Branchiostoma lanceolatumexon
BL96858_cuf3-E4BL96858_cuf3-E4-1564476830-78440Branchiostoma lanceolatumexon
BL96858_cuf3-E5BL96858_cuf3-E5-1564476830-78442Branchiostoma lanceolatumexon
BL96858_cuf3-E6BL96858_cuf3-E6-1564476830-78444Branchiostoma lanceolatumexon
BL96858_cuf3-E7BL96858_cuf3-E7-1564476830-78447Branchiostoma lanceolatumexon
BL96858_cuf3-E8BL96858_cuf3-E8-1564476830-78449Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000007genomeSc0000007:5490596..5503306 +
Properties
Property NameValue
Transcript idBL96858_cuf3
Biotypeprotein_coding