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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL96853_cuf1 >transcript:BL96853_cuf1-protein ID=transcript:BL96853_cuf1-protein|Name=transcript:BL96853_cuf1|organism=Branchiostoma lanceolatum|type=polypeptide|length=186bp
DNMYAIGGHRRNPAGWHEDINVVEMYQTSANQWTKLTSMDQPRSFAGSCV
VNNAVYVVGGVSKQSQSCMRTVQRYFPEEDRWERLPDLPTPTNGTVCATL
ALSWRVVNQSQAIYPPSRTPSYASVKDSSKNSFSLTINEQNNLHNSSSTP
SPGSETNKRSLASVAKQSTMKEQGTDRTSVEMGELI Run BLAST on NCBI mRNA from alignment at Sc0000007:6373829..6376211- Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL96853_cuf1 ID=transcript:BL96853_cuf1|Name=transcript:BL96853_cuf1|organism=Branchiostoma lanceolatum|type=mRNA|length=2383bp|location=Sequence derived from alignment at Sc0000007:6373829..6376211- (Branchiostoma lanceolatum)
GACAACATGTACGCCATCGGAGGTACGTCTTGTCCGCGGATGCTACATAA
ACAGCAAATCGTATTTCCCACCATATTTTAAGCTACAATAATCATAACTA
TTGTCTCCTACTATCCATAGTATGTTTTCGACAGCGTCTTTGGCGTAGTG
GTTAAGTTTGTTTGTTTGTGGTATAACTGCATAAATACATAAGCTAATGA
GGGGTTATTATGATATTTAGTATGTGGTCATGTGTCAATGAAACAAAGGA
CAAGTTTTTCTAGCCGTCTCCTAGCGGCTTTCCATAGTACTTAAGTAGAA
CCTAAGGTTTTGGTAAATTATGTTCTGAACGTGCCATGGACTTGATTTTT
AAGCAACAAGCAGCTTTTCGACGTCAGGAAGACTGAGTTATATGTTAATA
TGAGATCTATGTCGCTTGCCTTGGACCTACAGTTGTGTCTCAGAAACTTT
TAATCCATCTCTTCCTGTATTAAGAACACCGCAGAAATGCGGCAGGGTGA
CATGAGGATATAAACGTGGTTGAGATGTAACGGACTAGCGATTTTCCAGG
GAACTGCATGTGTATTTTTGTCGGTAATTATTTTGTTAATCAATCTCTTT
CTTTATTTAGGACATCGCAGAAACCCGGCAGGCTGGCTCGAGGATATAAA
CGTGGCTGAGATGTATCAAACCAGCGACTTTCCAGGGAACTGCAGGTGTG
TTTTTATCGACAGCTCTGAGTTAATTTTTCTCTTTCCTTATCTACAGGAC
ACCGCAGAAACCCGGCAGGCTGGCACGAGGATATAAACGTGGTTGAGATG
TACCAGACGAGCGCGAACCAGTGGACAAAGCTGACGTCCATGGACCAGCC
CAGGAGCTTCGCCGGCAGCTGTGTGGTGAATAACGCCGTCTATGTGGTCG
GCGGCGTGTCCAAACAGTCACAGGTGAGGTCACGTTTAAAGTAAGAAAAC
TATATCTTTTTTTGATTTTTGGTCTTCATGTTAAAATTATAAAGCATGAG
AGTCTGTGAAATACTTACAGAAAGTGACGTTCACAAAATATGTAGAAATT
TAAGATATGCCTGATTCTTCGTCATGCAAATAATGCCACAATGGAGCCCA
GTATCCAGTAACTCGCACCACCTGAATAAAAATCATCATCATTTGCATTC
TATATTACTTCTGCACGTACATTGCCCCTAATACAGAGCTGCATGCGAAC
TGTCCAGCGGTACTTCCCTGAAGAGGATCGCTGGGAGAGGCTGCCGGACC
TTCCTACTCCCACCAACGGCACTGTGTGCGCCACCTTGGCACTCTCATGG
AGGGTGAGTGTACACCGACACCTAACGACTTTAATTGGTACTGCAACAGA
ACTTCTGATTTTGGTGTCTACTGTTCTGAACACTCTATGGCTGCTATTTA
AGTGGCAGGTAGCTTATGACAACATACAAGAACTTCGTCTTAAAATAACT
TATTTTCATTAAGTATGACATTCCCAGCGATATCCATGTGTCCAACAGTG
AGTGAGCACCTTACCCCTCAGCGACTTTCATTGGCACTGCAACGAACTTT
CGGTTTTGGTATCTGATGTTTGATTTGTCACAATAGAGTGAGTGGAGTTT
TCCATCTAAGTCTGAATTTTCTTGCTAATGTTTTACATTCGTGACATTCC
CAGCGATACCCATGTGTCCACTAGTGACTGAAGACCTTATAAAACTATCA
TAGCAACATTCATTGGTACTGCAACAGAACCTCCAGTTTTGGTATCTCAT
GTTCTGAATATAGTTATAGTCCCGAATTTTCATCTATTAAAGTCTGAATT
TTCATGCTAACTTGTTACATTCGTGACATTCTAGGCGATACCCATGTGTC
CACTAGTGACTGAAGTCCTTATAACACCATTATTATTATAGCAACATTCA
TCGGTACTGCAACAGAACCTCCAGTTTTGGTATTTCATATTCTGCACATA
CTTAGTCTAAGTCTGAATTTTCCTGCTAATGTGTTACATTCGTGACGTTC
CCAGCGATCTCCATGTATCCACCAGGTAGTGAACCAAAGCCAGGCTATCT
ACCCACCGTCTCGGACTCCAAGTTACGCTAGCGTCAAGGACAGCAGCAAG
AACAGCTTCTCGCTCACCATCAACGAACAGAACAACCTGCACAACAGCAG
CAGCACCCCGTCACCTGGGAGCGAGACTAACAAGCGTTCTCTAGCCTCGG
TCGCCAAGCAAAGTACCATGAAGGAACAGGGAACGGACAGGACCAGTGTC
GAGATGGGGGAGCTTATCTAGAACTCAGCTGCATTGATAAATCTAAACGC
TAGTTCCGTACACAACGTAAAGCCTTTACCACCAAGCTTTTAACCAGTGC
TCATGCAGAGACGGGGGCTGATACTGACTGCCG Coding sequence (CDS) from alignment at Sc0000007:6373829..6376211- >transcript:BL96853_cuf1 ID=transcript:BL96853_cuf1|Name=transcript:BL96853_cuf1|organism=Branchiostoma lanceolatum|type=CDS|length=2244bp|location=Sequence derived from alignment at Sc0000007:6373829..6376211- (Branchiostoma lanceolatum)
GACAACATGTACGCCATCGGAGGACACCGCAGAAACCCGGCAGGCTGGCA
CGAGGATATAAACGTGGTTGAGATGTACCAGACGAGCGCGAACCAGTGGA
CAAAGCTGACGTCCATGGACCAGCCCAGGAGCTTCGCCGGCAGCTGTGTG
GTGAATAACGCCGTCTATGTGGTCGGCGGCGTGTCCAAACAGTCACAGAG
CTGCATGCGAACTGTCCAGCGGTACTTCCCTGAAGAGGATCGCTGGGAGA
GGCTGCCGGACCTTCCTACTCCCACCAACGGCACTGTGTGCGCCACCTTG
GCACTCTCATGGAGGGTAGTGAACCAAAGCCAGGCTATCTACCCACCGTC
TCGGACTCCAAGTTACGCTAGCGTCAAGGACAGCAGCAAGAACAGCTTCT
CGCTCACCATCAACGAACAGAACAACCTGCACAACAGCAGCAGCACCCCG
TCACCTGGGAGCGAGACTAACAAGCGTTCTCTAGCCTCGGTCGCCAAGCA
AAGTACCATGAAGGAACAGGGAACGGACAGGACCAGTGTCGAGATGGGGG
AGCTTATCTAGGACAACATGTACGCCATCGGAGGACACCGCAGAAACCCG
GCAGGCTGGCACGAGGATATAAACGTGGTTGAGATGTACCAGACGAGCGC
GAACCAGTGGACAAAGCTGACGTCCATGGACCAGCCCAGGAGCTTCGCCG
GCAGCTGTGTGGTGAATAACGCCGTCTATGTGGTCGGCGGCGTGTCCAAA
CAGTCACAGAGCTGCATGCGAACTGTCCAGCGGTACTTCCCTGAAGAGGA
TCGCTGGGAGAGGCTGCCGGACCTTCCTACTCCCACCAACGGCACTGTGT
GCGCCACCTTGGCACTCTCATGGAGGGTAGTGAACCAAAGCCAGGCTATC
TACCCACCGTCTCGGACTCCAAGTTACGCTAGCGTCAAGGACAGCAGCAA
GAACAGCTTCTCGCTCACCATCAACGAACAGAACAACCTGCACAACAGCA
GCAGCACCCCGTCACCTGGGAGCGAGACTAACAAGCGTTCTCTAGCCTCG
GTCGCCAAGCAAAGTACCATGAAGGAACAGGGAACGGACAGGACCAGTGT
CGAGATGGGGGAGCTTATCTAGGACAACATGTACGCCATCGGAGGACACC
GCAGAAACCCGGCAGGCTGGCACGAGGATATAAACGTGGTTGAGATGTAC
CAGACGAGCGCGAACCAGTGGACAAAGCTGACGTCCATGGACCAGCCCAG
GAGCTTCGCCGGCAGCTGTGTGGTGAATAACGCCGTCTATGTGGTCGGCG
GCGTGTCCAAACAGTCACAGAGCTGCATGCGAACTGTCCAGCGGTACTTC
CCTGAAGAGGATCGCTGGGAGAGGCTGCCGGACCTTCCTACTCCCACCAA
CGGCACTGTGTGCGCCACCTTGGCACTCTCATGGAGGGTAGTGAACCAAA
GCCAGGCTATCTACCCACCGTCTCGGACTCCAAGTTACGCTAGCGTCAAG
GACAGCAGCAAGAACAGCTTCTCGCTCACCATCAACGAACAGAACAACCT
GCACAACAGCAGCAGCACCCCGTCACCTGGGAGCGAGACTAACAAGCGTT
CTCTAGCCTCGGTCGCCAAGCAAAGTACCATGAAGGAACAGGGAACGGAC
AGGACCAGTGTCGAGATGGGGGAGCTTATCTAGGACAACATGTACGCCAT
CGGAGGACACCGCAGAAACCCGGCAGGCTGGCACGAGGATATAAACGTGG
TTGAGATGTACCAGACGAGCGCGAACCAGTGGACAAAGCTGACGTCCATG
GACCAGCCCAGGAGCTTCGCCGGCAGCTGTGTGGTGAATAACGCCGTCTA
TGTGGTCGGCGGCGTGTCCAAACAGTCACAGAGCTGCATGCGAACTGTCC
AGCGGTACTTCCCTGAAGAGGATCGCTGGGAGAGGCTGCCGGACCTTCCT
ACTCCCACCAACGGCACTGTGTGCGCCACCTTGGCACTCTCATGGAGGGT
AGTGAACCAAAGCCAGGCTATCTACCCACCGTCTCGGACTCCAAGTTACG
CTAGCGTCAAGGACAGCAGCAAGAACAGCTTCTCGCTCACCATCAACGAA
CAGAACAACCTGCACAACAGCAGCAGCACCCCGTCACCTGGGAGCGAGAC
TAACAAGCGTTCTCTAGCCTCGGTCGCCAAGCAAAGTACCATGAAGGAAC
AGGGAACGGACAGGACCAGTGTCGAGATGGGGGAGCTTATCTAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000007 | genome | Sc0000007:6373829..6376211 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL96853_cuf1 |
| Biotype | protein_coding |
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