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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL96815_cuf0 >transcript:BL96815_cuf0-protein ID=transcript:BL96815_cuf0-protein|Name=transcript:BL96815_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=426bp
AVSLTLVPRLVQLCAALSGDMMSVTIVALFVTSFLSGPVCGAEYDYGAYD
PARDAFRPGQFPDGFFWSTATASYQIEGGWNASGKGESIWDRFSHTPGKV
QRGDTGDVACDSYNKYQEDVQLMKNLGLRFYRFSLSWTRIFPDGTVAGGV
NQDGVDYYNNVINELIANGITPMVTLYHWDLPQALQDRYGGWVSGELVQH
FDDYATFAFQTFGDRVKYWITFNEPWVVCTAGYGSGGHAPGIQDSGNSTY
LCGHTIIKSHASAWHSYDQTFRSVQGGQVSITLSCGWTEPFDPDLPADVI
AADRDLQFQMGWFAHPIYTSQGDYPPAMKDIILQKSLAQGFQESRLPQFT
AAEIASISGTYDFFGLNHYSSGIVKDKVSTGQDPNFWTDQDLESTVAPEW
PQAASSWLYSVPWGIRRLLRYIKVKX Run BLAST on NCBI mRNA from alignment at Sc0000208:324689..326397+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL96815_cuf0 ID=transcript:BL96815_cuf0|Name=transcript:BL96815_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=1709bp|location=Sequence derived from alignment at Sc0000208:324689..326397+ (Branchiostoma lanceolatum)
GGCGGTTAGCTTAACCTTGGTGCCAAGATTAGTTCAGCTCTGTGCAGCAT
TGAGCGGGGACATGATGTCGGTTACCATAGTGGCTCTGTTTGTCACGTCT
TTTCTAAGTGGCCCAGTTTGCGGTGCTGAGTACGACTACGGTGCGTACGA
CCCAGCCAGGGATGCATTTAGACCAGGACAGTTTCCTGACGGATTTTTCT
GGAGCACGGCCACGGCGTCCTACCAGATCGAGGGCGGCTGGAACGCCAGC
GGCAAAGGCGAGTCCATCTGGGACAGGTTCTCCCACACACCTGGTAAGGT
GCAGCGAGGAGACACCGGAGACGTGGCCTGTGACAGCTACAACAAGTACC
AAGAAGACGTGCAACTCATGAAGAACCTGGGCCTAAGGTTCTACCGCTTC
TCTCTGTCATGGACCCGAATCTTTCCCGACGGTACCGTGGCGGGTGGCGT
CAATCAAGACGGAGTTGACTATTACAACAACGTCATAAATGAGCTGATCG
CAAACGGCATCACCCCGATGGTGACGCTTTACCACTGGGACCTTCCGCAG
GCCCTACAGGACAGGTACGGGGGATGGGTTAGCGGGGAACTCGTCCAACA
CTTCGACGACTACGCCACCTTCGCGTTCCAGACTTTCGGTGACAGAGTGA
AGTACTGGATCACGTTTAACGAGCCCTGGGTGGTGTGTACTGCAGGATAC
GGGTCTGGAGGCCACGCTCCCGGCATACAGGACTCAGGAAACTCCACTTA
TCTCTGTGGACACACTATCATAAAGGTAAGATCTCCTGTCCTACTTTATA
TACTTCGCAGAAGGGCAAACGTAAATTGGCGTCTTGTGACTGATGTTCCA
TCAATCTTTGTCTCCTTCAACTTACATGACAACAATAAAACGGTTGCTTT
CTTTCTCTAGTCCCACGCCAGTGCGTGGCACAGCTACGACCAGACCTTCC
GCAGTGTCCAAGGAGGACAGGTCAGCATCACGCTCAGCTGTGGTTGGACC
GAACCGTTCGACCCCGACCTGCCGGCAGATGTCATCGCTGCCGATCGCGA
TCTCCAGTTCCAAATGGGCTGGTTCGCCCACCCGATCTACACTTCACAGG
GCGACTATCCTCCCGCCATGAAGGATATCGTGAGTCATGCAATAATGATA
CATGTATACTCTCTATGCTTTCTATCTTATCTATGCACTTTTGATAAACA
TACAGGTATCTGGTACATGGTAATAACTCCGCTGTTCTGGTCTCACAGTT
CCATACCGTACGTTCCAGATCTTACAGAAGAGTCTGGCGCAGGGTTTCCA
GGAGTCCCGTCTGCCGCAGTTCACGGCTGCCGAGATCGCTTCCATCAGTG
GGACCTACGATTTCTTCGGGCTGAACCATTATTCATCTGGGATAGTGAAG
GATAAGGTCTCGACCGGACAGGTCAGTCTTTCAAGTTTGAGATTCAGCAC
TTATAGATACTTTTTAACGCCACCTGCTATTTTCAAGACACAACCTTTTG
GCGACGCCTCAGGGACGTATTTTGGTGCAAATGTTTTTCTCCCAGAAAAT
AAATCGTTTTTCTCTTTCACCTCAGGACCCTAATTTCTGGACCGACCAGG
ACCTGGAGTCGACCGTCGCGCCCGAGTGGCCCCAGGCGGCTTCCAGCTGG
CTCTACTCCGTACCGTGGGGGATCCGCAGGCTGCTCCGCTACATCAAGGT
AAAGCANNN Coding sequence (CDS) from alignment at Sc0000208:324689..326397+ >transcript:BL96815_cuf0 ID=transcript:BL96815_cuf0|Name=transcript:BL96815_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=5112bp|location=Sequence derived from alignment at Sc0000208:324689..326397+ (Branchiostoma lanceolatum)
GCGGTTAGCTTAACCTTGGTGCCAAGATTAGTTCAGCTCTGTGCAGCATT
GAGCGGGGACATGATGTCGGTTACCATAGTGGCTCTGTTTGTCACGTCTT
TTCTAAGTGGCCCAGTTTGCGGTGCTGAGTACGACTACGGTGCGTACGAC
CCAGCCAGGGATGCATTTAGACCAGGACAGTTTCCTGACGGATTTTTCTG
GAGCACGGCCACGGCGTCCTACCAGATCGAGGGCGGCTGGAACGCCAGCG
GCAAAGGCGAGTCCATCTGGGACAGGTTCTCCCACACACCTGGTAAGGTG
CAGCGAGGAGACACCGGAGACGTGGCCTGTGACAGCTACAACAAGTACCA
AGAAGACGTGCAACTCATGAAGAACCTGGGCCTAAGGTTCTACCGCTTCT
CTCTGTCATGGACCCGAATCTTTCCCGACGGTACCGTGGCGGGTGGCGTC
AATCAAGACGGAGTTGACTATTACAACAACGTCATAAATGAGCTGATCGC
AAACGGCATCACCCCGATGGTGACGCTTTACCACTGGGACCTTCCGCAGG
CCCTACAGGACAGGTACGGGGGATGGGTTAGCGGGGAACTCGTCCAACAC
TTCGACGACTACGCCACCTTCGCGTTCCAGACTTTCGGTGACAGAGTGAA
GTACTGGATCACGTTTAACGAGCCCTGGGTGGTGTGTACTGCAGGATACG
GGTCTGGAGGCCACGCTCCCGGCATACAGGACTCAGGAAACTCCACTTAT
CTCTGTGGACACACTATCATAAAGTCCCACGCCAGTGCGTGGCACAGCTA
CGACCAGACCTTCCGCAGTGTCCAAGGAGGACAGGTCAGCATCACGCTCA
GCTGTGGTTGGACCGAACCGTTCGACCCCGACCTGCCGGCAGATGTCATC
GCTGCCGATCGCGATCTCCAGTTCCAAATGGGCTGGTTCGCCCACCCGAT
CTACACTTCACAGGGCGACTATCCTCCCGCCATGAAGGATATCATCTTAC
AGAAGAGTCTGGCGCAGGGTTTCCAGGAGTCCCGTCTGCCGCAGTTCACG
GCTGCCGAGATCGCTTCCATCAGTGGGACCTACGATTTCTTCGGGCTGAA
CCATTATTCATCTGGGATAGTGAAGGATAAGGTCTCGACCGGACAGGACC
CTAATTTCTGGACCGACCAGGACCTGGAGTCGACCGTCGCGCCCGAGTGG
CCCCAGGCGGCTTCCAGCTGGCTCTACTCCGTACCGTGGGGGATCCGCAG
GCTGCTCCGCTACATCAAGGTAAAGCANGCGGTTAGCTTAACCTTGGTGC
CAAGATTAGTTCAGCTCTGTGCAGCATTGAGCGGGGACATGATGTCGGTT
ACCATAGTGGCTCTGTTTGTCACGTCTTTTCTAAGTGGCCCAGTTTGCGG
TGCTGAGTACGACTACGGTGCGTACGACCCAGCCAGGGATGCATTTAGAC
CAGGACAGTTTCCTGACGGATTTTTCTGGAGCACGGCCACGGCGTCCTAC
CAGATCGAGGGCGGCTGGAACGCCAGCGGCAAAGGCGAGTCCATCTGGGA
CAGGTTCTCCCACACACCTGGTAAGGTGCAGCGAGGAGACACCGGAGACG
TGGCCTGTGACAGCTACAACAAGTACCAAGAAGACGTGCAACTCATGAAG
AACCTGGGCCTAAGGTTCTACCGCTTCTCTCTGTCATGGACCCGAATCTT
TCCCGACGGTACCGTGGCGGGTGGCGTCAATCAAGACGGAGTTGACTATT
ACAACAACGTCATAAATGAGCTGATCGCAAACGGCATCACCCCGATGGTG
ACGCTTTACCACTGGGACCTTCCGCAGGCCCTACAGGACAGGTACGGGGG
ATGGGTTAGCGGGGAACTCGTCCAACACTTCGACGACTACGCCACCTTCG
CGTTCCAGACTTTCGGTGACAGAGTGAAGTACTGGATCACGTTTAACGAG
CCCTGGGTGGTGTGTACTGCAGGATACGGGTCTGGAGGCCACGCTCCCGG
CATACAGGACTCAGGAAACTCCACTTATCTCTGTGGACACACTATCATAA
AGTCCCACGCCAGTGCGTGGCACAGCTACGACCAGACCTTCCGCAGTGTC
CAAGGAGGACAGGTCAGCATCACGCTCAGCTGTGGTTGGACCGAACCGTT
CGACCCCGACCTGCCGGCAGATGTCATCGCTGCCGATCGCGATCTCCAGT
TCCAAATGGGCTGGTTCGCCCACCCGATCTACACTTCACAGGGCGACTAT
CCTCCCGCCATGAAGGATATCATCTTACAGAAGAGTCTGGCGCAGGGTTT
CCAGGAGTCCCGTCTGCCGCAGTTCACGGCTGCCGAGATCGCTTCCATCA
GTGGGACCTACGATTTCTTCGGGCTGAACCATTATTCATCTGGGATAGTG
AAGGATAAGGTCTCGACCGGACAGGACCCTAATTTCTGGACCGACCAGGA
CCTGGAGTCGACCGTCGCGCCCGAGTGGCCCCAGGCGGCTTCCAGCTGGC
TCTACTCCGTACCGTGGGGGATCCGCAGGCTGCTCCGCTACATCAAGGTA
AAGCANGCGGTTAGCTTAACCTTGGTGCCAAGATTAGTTCAGCTCTGTGC
AGCATTGAGCGGGGACATGATGTCGGTTACCATAGTGGCTCTGTTTGTCA
CGTCTTTTCTAAGTGGCCCAGTTTGCGGTGCTGAGTACGACTACGGTGCG
TACGACCCAGCCAGGGATGCATTTAGACCAGGACAGTTTCCTGACGGATT
TTTCTGGAGCACGGCCACGGCGTCCTACCAGATCGAGGGCGGCTGGAACG
CCAGCGGCAAAGGCGAGTCCATCTGGGACAGGTTCTCCCACACACCTGGT
AAGGTGCAGCGAGGAGACACCGGAGACGTGGCCTGTGACAGCTACAACAA
GTACCAAGAAGACGTGCAACTCATGAAGAACCTGGGCCTAAGGTTCTACC
GCTTCTCTCTGTCATGGACCCGAATCTTTCCCGACGGTACCGTGGCGGGT
GGCGTCAATCAAGACGGAGTTGACTATTACAACAACGTCATAAATGAGCT
GATCGCAAACGGCATCACCCCGATGGTGACGCTTTACCACTGGGACCTTC
CGCAGGCCCTACAGGACAGGTACGGGGGATGGGTTAGCGGGGAACTCGTC
CAACACTTCGACGACTACGCCACCTTCGCGTTCCAGACTTTCGGTGACAG
AGTGAAGTACTGGATCACGTTTAACGAGCCCTGGGTGGTGTGTACTGCAG
GATACGGGTCTGGAGGCCACGCTCCCGGCATACAGGACTCAGGAAACTCC
ACTTATCTCTGTGGACACACTATCATAAAGTCCCACGCCAGTGCGTGGCA
CAGCTACGACCAGACCTTCCGCAGTGTCCAAGGAGGACAGGTCAGCATCA
CGCTCAGCTGTGGTTGGACCGAACCGTTCGACCCCGACCTGCCGGCAGAT
GTCATCGCTGCCGATCGCGATCTCCAGTTCCAAATGGGCTGGTTCGCCCA
CCCGATCTACACTTCACAGGGCGACTATCCTCCCGCCATGAAGGATATCA
TCTTACAGAAGAGTCTGGCGCAGGGTTTCCAGGAGTCCCGTCTGCCGCAG
TTCACGGCTGCCGAGATCGCTTCCATCAGTGGGACCTACGATTTCTTCGG
GCTGAACCATTATTCATCTGGGATAGTGAAGGATAAGGTCTCGACCGGAC
AGGACCCTAATTTCTGGACCGACCAGGACCTGGAGTCGACCGTCGCGCCC
GAGTGGCCCCAGGCGGCTTCCAGCTGGCTCTACTCCGTACCGTGGGGGAT
CCGCAGGCTGCTCCGCTACATCAAGGTAAAGCANGCGGTTAGCTTAACCT
TGGTGCCAAGATTAGTTCAGCTCTGTGCAGCATTGAGCGGGGACATGATG
TCGGTTACCATAGTGGCTCTGTTTGTCACGTCTTTTCTAAGTGGCCCAGT
TTGCGGTGCTGAGTACGACTACGGTGCGTACGACCCAGCCAGGGATGCAT
TTAGACCAGGACAGTTTCCTGACGGATTTTTCTGGAGCACGGCCACGGCG
TCCTACCAGATCGAGGGCGGCTGGAACGCCAGCGGCAAAGGCGAGTCCAT
CTGGGACAGGTTCTCCCACACACCTGGTAAGGTGCAGCGAGGAGACACCG
GAGACGTGGCCTGTGACAGCTACAACAAGTACCAAGAAGACGTGCAACTC
ATGAAGAACCTGGGCCTAAGGTTCTACCGCTTCTCTCTGTCATGGACCCG
AATCTTTCCCGACGGTACCGTGGCGGGTGGCGTCAATCAAGACGGAGTTG
ACTATTACAACAACGTCATAAATGAGCTGATCGCAAACGGCATCACCCCG
ATGGTGACGCTTTACCACTGGGACCTTCCGCAGGCCCTACAGGACAGGTA
CGGGGGATGGGTTAGCGGGGAACTCGTCCAACACTTCGACGACTACGCCA
CCTTCGCGTTCCAGACTTTCGGTGACAGAGTGAAGTACTGGATCACGTTT
AACGAGCCCTGGGTGGTGTGTACTGCAGGATACGGGTCTGGAGGCCACGC
TCCCGGCATACAGGACTCAGGAAACTCCACTTATCTCTGTGGACACACTA
TCATAAAGTCCCACGCCAGTGCGTGGCACAGCTACGACCAGACCTTCCGC
AGTGTCCAAGGAGGACAGGTCAGCATCACGCTCAGCTGTGGTTGGACCGA
ACCGTTCGACCCCGACCTGCCGGCAGATGTCATCGCTGCCGATCGCGATC
TCCAGTTCCAAATGGGCTGGTTCGCCCACCCGATCTACACTTCACAGGGC
GACTATCCTCCCGCCATGAAGGATATCATCTTACAGAAGAGTCTGGCGCA
GGGTTTCCAGGAGTCCCGTCTGCCGCAGTTCACGGCTGCCGAGATCGCTT
CCATCAGTGGGACCTACGATTTCTTCGGGCTGAACCATTATTCATCTGGG
ATAGTGAAGGATAAGGTCTCGACCGGACAGGACCCTAATTTCTGGACCGA
CCAGGACCTGGAGTCGACCGTCGCGCCCGAGTGGCCCCAGGCGGCTTCCA
GCTGGCTCTACTCCGTACCGTGGGGGATCCGCAGGCTGCTCCGCTACATC
AAGGTAAAGCAN
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| Sc0000208 | genome | Sc0000208:324689..326397 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL96815_cuf0 |
| Biotype | protein_coding |
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