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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL96806_cuf13 >transcript:BL96806_cuf13-protein ID=transcript:BL96806_cuf13-protein|Name=transcript:BL96806_cuf13|organism=Branchiostoma lanceolatum|type=polypeptide|length=268bp
PTPTGSRQGTPRAGSREGSARASPEGEKPGSRQGSAGKERTGSAGKERPS
SAGKDRPSSGKDRPPSAGKDRPSSGTARPSSGKSRKSSAASQKSARAGSA
GKPPSGKASPVAPGDQSVEDTKPTTMGGRYTPASRKSETTEEPIPIDALN
MVWSFGLNKRVPAINMTDEQRRLVLYTCAHTAVLYDYSNNTQKLLQGHCN
MISSTCVSEDRRWIATADSGQNSMVIVWDSYSCIPVQTLFDPHVGGVTTM
AMTPDAKYLVTVSAAQTQ Run BLAST on NCBI mRNA from alignment at Sc0000090:467596..470802- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL96806_cuf13 ID=transcript:BL96806_cuf13|Name=transcript:BL96806_cuf13|organism=Branchiostoma lanceolatum|type=mRNA|length=3207bp|location=Sequence derived from alignment at Sc0000090:467596..470802- (Branchiostoma lanceolatum)
CCCACCCCCACGGGAAGCCGACAGGGCACCCCACGGGCGGGGAGTAGGGA
GGGCAGTGCACGGGCCAGTCCGGAAGGCGAGAAACCTGGCAGTCGACAAG
GCAGCGCAGGGAAGGAGCGGACAGGAAGTGCGGGAAAGGAAAGGCCAAGC
AGTGCAGGTACATGTTTCTTTGATTTTGTTTGTCAAAGTTTCTCTTTTTT
CAAATTTCTCATAAAATTGACTTGTCATGCTTTGTCTTTCACAATATCAT
GGTGGTTGAATATATTTTGCTCCATGTGAAACTAATTGATCTTACTACTA
TACATGTATGTAATAAGTGTATGGTACATTTGAATCGTGATTCGTTAGAC
CTTCTTTTGAAAACTTTTTGAACATTGAGAAAAAGGAGAGAAACATTTGC
TTTGCGTACTATGTTTTGTTTACTGATCTTAGATCTTGACTAAATGGTCT
GTTTTAAAGCCATTTTCATGGACCAGTAAGGATTACTTGAAAGAGAAAAA
AATCAAACAATCTGTTTGCCTTCTTCCCTAGGAAAAGACAGACCCTCCAG
TGGCAAGGATCGGCCCCCCAGCGCCGGTAAAGACAGACCCAGCTCTGGTA
CAGCGAGGCCCTCTAGCGGGAAGAGCAGGAAGTCCAGCGCAGCGTCACAG
AAGAGCGCCCGTGCTGGGAGTGCTGGGGTGAGACTAAAATGCTCTATGAT
TGTCTTTGAAACGTTTTTGAAAATAGGAGAGCCAAAGAAAGCTTAGCCTG
ATTTCAATCAAGCCTCCTGTGACCGCTCGCAGCCCTGTAACTGCCTCGCT
GCCTAGGAGGAGACAGATACCCCCGGACAGCTCAAGTTTGCCTTATACAG
ACTAAACTTTCACTGTAACTTTATGTTCACTGTTTTTACGGTCACCTCTG
TACCGTGAACTTATCATCACCGTGAAAAAACCTGTTGTAACTATCTATGA
TTCCTTCACACATATGTAAATCACTTGCCGCCATAGTGAAGTTGGAGTTC
AGTGAAAATGTCCATTTTCCAATACACTGTGAAATTTTGCTACCGTGAAG
ATAAAGTGAATTACAGTATCCTAAGGCCACTAGATAATAAAAATGGCATA
TATCAGGGTGATTAGTAGACCTTTAAATTCACAAATTTTGTGGCTGTCTT
AATAACTTAATTAGGACACCTAGCGGAATTATGATAGTTGCTGTTAAGTA
GGGTTTGTATAAGAAAAAATGAAGAAAATGAAACTACAGTAATAGTGCTT
TAACTAAAGACTCTCTCCTTTTTTTTACTGTTCCTCCCACAGAAACCTCC
CAGTGGAAAGGCCAGCCCGGTTGCCCCCGGTGACCAGAGTGTGGAAGATA
CCAAACCTACCACCATGGGGGGGAGGTACACCCCGGCCTCTCGCAAGTCT
GAAACAACGGAAGAGCCCATCCCCATTGATGCATTGGTATGTTCCACTAT
GCCATAGTTGTTGCTGTGCAAAATGTGAATGCACAATGTACAAGTTTAAA
TACAGTTAAACCTGAAGGTACATGTCTATGGTGACCACTCAATTATGGAC
TTACAGAAAATGGCTCCAGTAAACAGATGACCACTATAGACAGGATTCTT
AGCTCAATTGGAAAAATAGTCAAAGGGACCACCAAAAAGTCGCCACAATG
GCTAGGTGGTCCTAGTACAGGTTTGACTGTATATCAATGGCCAGGTGGTC
CTTATGTAGATGTGGTCACTAGTACAGGTTTGACCATACATCAATGGCTA
GGTGGTCTTTATAGAGAGATGGTTAGTACAGGTTTGACTGTATGCCTTTA
TTCCTAATCAAACTTGTGGATTGGTTTTGAATTACTGTTGATGTTTGGAC
AGCTCACCCAAACTGGTGATATATCCTGTCCTCAAGCATGGCATGTTTAT
TATTATGGATAATTATAGTATAATTATATTTAAGTGAACAACTCCCTAGG
GACCATTTAATGCACTTTGCATATTTGCCACCCCCTGCTATGCACTCATT
AAAAATATGAACTTGATTTGGTAAAGCACTTTGGAGTTATTTGCCCCGAG
TCGGGAATTAAATTGTTTTTCTGGAATTAAATTGCGGTTTGTTACATTTG
AATTCTTCCCCAGAACATGGTGTGGTCGTTTGGTCTGAACAAGCGCGTTC
CTGCCATCAACATGACGGACGAGCAGCGCCGGCTGGTTCTGTACACGTGT
GCGCACACCGCCGTGCTGTACGACTACAGCAACAACACACAGAAACTGCT
GCAGGGACATGTGAGTATGCTTTTTCATAAGACAAACTTTCTTGAGAATC
AGAAAAATATGAAAAGTCATGACACTGTATTAATCAATAGACTTATTCGT
TTTAAAAGACGGTTTAGGCAGAAAAATCAGAGTCTAGACATTTCTTCCCC
CAGTGTAACATGATCTCCAGTCCTGTGTAACATGATACCCATGTTCCCCA
GTGTAACATGATCTCCAGTACCTGTGTAACATGATACCCATGTTCCCCCA
GTGTAACATGATCTCCAGTACCTGTGTAACATGATACCCATGTTCTCCCA
GTGTAACATGATCTCCAGCACCTGTGTAACATGATACCCATGTTCCCCCA
GTGTAACATGATCTCCAGCACCTGTGTGACATGATACCCATGTTCCCCCA
GTGTAGCATGATCTCCAGCACCTGTGTGTGTAATATGATACCCATGTTTC
CCCAGTGTAACATGATCTCCAGCACCTGTGTGAGTGAGGACAGACGTTGG
ATCGCCACAGCAGACAGTGGACAGAACAGCATGGTCATCGTGTGGGACTC
CTACTCATGGTAACTTGATATCATCTTCTGATATGTAACTTGATATCAGC
ATTTGTATCAAGGGTATCAGAAACTCATAGGGATGATGTTAAGATGACAC
TAACAATTTAAAAATTACTTGTCTTACAAACTGTACCATAAAACAAAGAA
GATGTTGAACATTTCTAGAGCTGTTTTCTTCAAGTTAGACTCTGACCCTC
GCTAAGAAAATATCGCTTCAGTCCAAGATGTCTTTCCTTTAGTGACGATT
GTTTTGTTATCAAAGATGAACTGAAGATACTATTTTGATTTATTCACCCA
GCATCCCAGTGCAGACCCTGTTTGACCCCCATGTCGGGGGCGTGACTACC
ATGGCGATGACCCCTGATGCTAAGTACCTGGTGACGGTTAGCGCCGCCCA
AACACAG Coding sequence (CDS) from alignment at Sc0000090:467596..470802- >transcript:BL96806_cuf13 ID=transcript:BL96806_cuf13|Name=transcript:BL96806_cuf13|organism=Branchiostoma lanceolatum|type=CDS|length=5628bp|location=Sequence derived from alignment at Sc0000090:467596..470802- (Branchiostoma lanceolatum)
CCCACCCCCACGGGAAGCCGACAGGGCACCCCACGGGCGGGGAGTAGGGA
GGGCAGTGCACGGGCCAGTCCGGAAGGCGAGAAACCTGGCAGTCGACAAG
GCAGCGCAGGGAAGGAGCGGACAGGAAGTGCGGGAAAGGAAAGGCCAAGC
AGTGCAGGAAAAGACAGACCCTCCAGTGGCAAGGATCGGCCCCCCAGCGC
CGGTAAAGACAGACCCAGCTCTGGTACAGCGAGGCCCTCTAGCGGGAAGA
GCAGGAAGTCCAGCGCAGCGTCACAGAAGAGCGCCCGTGCTGGGAGTGCT
GGGAAACCTCCCAGTGGAAAGGCCAGCCCGGTTGCCCCCGGTGACCAGAG
TGTGGAAGATACCAAACCTACCACCATGGGGGGGAGGTACACCCCGGCCT
CTCGCAAGTCTGAAACAACGGAAGAGCCCATCCCCATTGATGCATTGAAC
ATGGTGTGGTCGTTTGGTCTGAACAAGCGCGTTCCTGCCATCAACATGAC
GGACGAGCAGCGCCGGCTGGTTCTGTACACGTGTGCGCACACCGCCGTGC
TGTACGACTACAGCAACAACACACAGAAACTGCTGCAGGGACATTGTAAC
ATGATCTCCAGCACCTGTGTGAGTGAGGACAGACGTTGGATCGCCACAGC
AGACAGTGGACAGAACAGCATGGTCATCGTGTGGGACTCCTACTCATGCA
TCCCAGTGCAGACCCTGTTTGACCCCCATGTCGGGGGCGTGACTACCATG
GCGATGACCCCTGATGCTAAGTACCTGGTGACGGTTAGCGCCGCCCAAAC
ACAGCCCACCCCCACGGGAAGCCGACAGGGCACCCCACGGGCGGGGAGTA
GGGAGGGCAGTGCACGGGCCAGTCCGGAAGGCGAGAAACCTGGCAGTCGA
CAAGGCAGCGCAGGGAAGGAGCGGACAGGAAGTGCGGGAAAGGAAAGGCC
AAGCAGTGCAGGAAAAGACAGACCCTCCAGTGGCAAGGATCGGCCCCCCA
GCGCCGGTAAAGACAGACCCAGCTCTGGTACAGCGAGGCCCTCTAGCGGG
AAGAGCAGGAAGTCCAGCGCAGCGTCACAGAAGAGCGCCCGTGCTGGGAG
TGCTGGGAAACCTCCCAGTGGAAAGGCCAGCCCGGTTGCCCCCGGTGACC
AGAGTGTGGAAGATACCAAACCTACCACCATGGGGGGGAGGTACACCCCG
GCCTCTCGCAAGTCTGAAACAACGGAAGAGCCCATCCCCATTGATGCATT
GAACATGGTGTGGTCGTTTGGTCTGAACAAGCGCGTTCCTGCCATCAACA
TGACGGACGAGCAGCGCCGGCTGGTTCTGTACACGTGTGCGCACACCGCC
GTGCTGTACGACTACAGCAACAACACACAGAAACTGCTGCAGGGACATTG
TAACATGATCTCCAGCACCTGTGTGAGTGAGGACAGACGTTGGATCGCCA
CAGCAGACAGTGGACAGAACAGCATGGTCATCGTGTGGGACTCCTACTCA
TGCATCCCAGTGCAGACCCTGTTTGACCCCCATGTCGGGGGCGTGACTAC
CATGGCGATGACCCCTGATGCTAAGTACCTGGTGACGGTTAGCGCCGCCC
AAACACAGCCCACCCCCACGGGAAGCCGACAGGGCACCCCACGGGCGGGG
AGTAGGGAGGGCAGTGCACGGGCCAGTCCGGAAGGCGAGAAACCTGGCAG
TCGACAAGGCAGCGCAGGGAAGGAGCGGACAGGAAGTGCGGGAAAGGAAA
GGCCAAGCAGTGCAGGAAAAGACAGACCCTCCAGTGGCAAGGATCGGCCC
CCCAGCGCCGGTAAAGACAGACCCAGCTCTGGTACAGCGAGGCCCTCTAG
CGGGAAGAGCAGGAAGTCCAGCGCAGCGTCACAGAAGAGCGCCCGTGCTG
GGAGTGCTGGGAAACCTCCCAGTGGAAAGGCCAGCCCGGTTGCCCCCGGT
GACCAGAGTGTGGAAGATACCAAACCTACCACCATGGGGGGGAGGTACAC
CCCGGCCTCTCGCAAGTCTGAAACAACGGAAGAGCCCATCCCCATTGATG
CATTGAACATGGTGTGGTCGTTTGGTCTGAACAAGCGCGTTCCTGCCATC
AACATGACGGACGAGCAGCGCCGGCTGGTTCTGTACACGTGTGCGCACAC
CGCCGTGCTGTACGACTACAGCAACAACACACAGAAACTGCTGCAGGGAC
ATTGTAACATGATCTCCAGCACCTGTGTGAGTGAGGACAGACGTTGGATC
GCCACAGCAGACAGTGGACAGAACAGCATGGTCATCGTGTGGGACTCCTA
CTCATGCATCCCAGTGCAGACCCTGTTTGACCCCCATGTCGGGGGCGTGA
CTACCATGGCGATGACCCCTGATGCTAAGTACCTGGTGACGGTTAGCGCC
GCCCAAACACAGCCCACCCCCACGGGAAGCCGACAGGGCACCCCACGGGC
GGGGAGTAGGGAGGGCAGTGCACGGGCCAGTCCGGAAGGCGAGAAACCTG
GCAGTCGACAAGGCAGCGCAGGGAAGGAGCGGACAGGAAGTGCGGGAAAG
GAAAGGCCAAGCAGTGCAGGAAAAGACAGACCCTCCAGTGGCAAGGATCG
GCCCCCCAGCGCCGGTAAAGACAGACCCAGCTCTGGTACAGCGAGGCCCT
CTAGCGGGAAGAGCAGGAAGTCCAGCGCAGCGTCACAGAAGAGCGCCCGT
GCTGGGAGTGCTGGGAAACCTCCCAGTGGAAAGGCCAGCCCGGTTGCCCC
CGGTGACCAGAGTGTGGAAGATACCAAACCTACCACCATGGGGGGGAGGT
ACACCCCGGCCTCTCGCAAGTCTGAAACAACGGAAGAGCCCATCCCCATT
GATGCATTGAACATGGTGTGGTCGTTTGGTCTGAACAAGCGCGTTCCTGC
CATCAACATGACGGACGAGCAGCGCCGGCTGGTTCTGTACACGTGTGCGC
ACACCGCCGTGCTGTACGACTACAGCAACAACACACAGAAACTGCTGCAG
GGACATTGTAACATGATCTCCAGCACCTGTGTGAGTGAGGACAGACGTTG
GATCGCCACAGCAGACAGTGGACAGAACAGCATGGTCATCGTGTGGGACT
CCTACTCATGCATCCCAGTGCAGACCCTGTTTGACCCCCATGTCGGGGGC
GTGACTACCATGGCGATGACCCCTGATGCTAAGTACCTGGTGACGGTTAG
CGCCGCCCAAACACAGCCCACCCCCACGGGAAGCCGACAGGGCACCCCAC
GGGCGGGGAGTAGGGAGGGCAGTGCACGGGCCAGTCCGGAAGGCGAGAAA
CCTGGCAGTCGACAAGGCAGCGCAGGGAAGGAGCGGACAGGAAGTGCGGG
AAAGGAAAGGCCAAGCAGTGCAGGAAAAGACAGACCCTCCAGTGGCAAGG
ATCGGCCCCCCAGCGCCGGTAAAGACAGACCCAGCTCTGGTACAGCGAGG
CCCTCTAGCGGGAAGAGCAGGAAGTCCAGCGCAGCGTCACAGAAGAGCGC
CCGTGCTGGGAGTGCTGGGAAACCTCCCAGTGGAAAGGCCAGCCCGGTTG
CCCCCGGTGACCAGAGTGTGGAAGATACCAAACCTACCACCATGGGGGGG
AGGTACACCCCGGCCTCTCGCAAGTCTGAAACAACGGAAGAGCCCATCCC
CATTGATGCATTGAACATGGTGTGGTCGTTTGGTCTGAACAAGCGCGTTC
CTGCCATCAACATGACGGACGAGCAGCGCCGGCTGGTTCTGTACACGTGT
GCGCACACCGCCGTGCTGTACGACTACAGCAACAACACACAGAAACTGCT
GCAGGGACATTGTAACATGATCTCCAGCACCTGTGTGAGTGAGGACAGAC
GTTGGATCGCCACAGCAGACAGTGGACAGAACAGCATGGTCATCGTGTGG
GACTCCTACTCATGCATCCCAGTGCAGACCCTGTTTGACCCCCATGTCGG
GGGCGTGACTACCATGGCGATGACCCCTGATGCTAAGTACCTGGTGACGG
TTAGCGCCGCCCAAACACAGCCCACCCCCACGGGAAGCCGACAGGGCACC
CCACGGGCGGGGAGTAGGGAGGGCAGTGCACGGGCCAGTCCGGAAGGCGA
GAAACCTGGCAGTCGACAAGGCAGCGCAGGGAAGGAGCGGACAGGAAGTG
CGGGAAAGGAAAGGCCAAGCAGTGCAGGAAAAGACAGACCCTCCAGTGGC
AAGGATCGGCCCCCCAGCGCCGGTAAAGACAGACCCAGCTCTGGTACAGC
GAGGCCCTCTAGCGGGAAGAGCAGGAAGTCCAGCGCAGCGTCACAGAAGA
GCGCCCGTGCTGGGAGTGCTGGGAAACCTCCCAGTGGAAAGGCCAGCCCG
GTTGCCCCCGGTGACCAGAGTGTGGAAGATACCAAACCTACCACCATGGG
GGGGAGGTACACCCCGGCCTCTCGCAAGTCTGAAACAACGGAAGAGCCCA
TCCCCATTGATGCATTGAACATGGTGTGGTCGTTTGGTCTGAACAAGCGC
GTTCCTGCCATCAACATGACGGACGAGCAGCGCCGGCTGGTTCTGTACAC
GTGTGCGCACACCGCCGTGCTGTACGACTACAGCAACAACACACAGAAAC
TGCTGCAGGGACATTGTAACATGATCTCCAGCACCTGTGTGAGTGAGGAC
AGACGTTGGATCGCCACAGCAGACAGTGGACAGAACAGCATGGTCATCGT
GTGGGACTCCTACTCATGCATCCCAGTGCAGACCCTGTTTGACCCCCATG
TCGGGGGCGTGACTACCATGGCGATGACCCCTGATGCTAAGTACCTGGTG
ACGGTTAGCGCCGCCCAAACACAGCCCACCCCCACGGGAAGCCGACAGGG
CACCCCACGGGCGGGGAGTAGGGAGGGCAGTGCACGGGCCAGTCCGGAAG
GCGAGAAACCTGGCAGTCGACAAGGCAGCGCAGGGAAGGAGCGGACAGGA
AGTGCGGGAAAGGAAAGGCCAAGCAGTGCAGGAAAAGACAGACCCTCCAG
TGGCAAGGATCGGCCCCCCAGCGCCGGTAAAGACAGACCCAGCTCTGGTA
CAGCGAGGCCCTCTAGCGGGAAGAGCAGGAAGTCCAGCGCAGCGTCACAG
AAGAGCGCCCGTGCTGGGAGTGCTGGGAAACCTCCCAGTGGAAAGGCCAG
CCCGGTTGCCCCCGGTGACCAGAGTGTGGAAGATACCAAACCTACCACCA
TGGGGGGGAGGTACACCCCGGCCTCTCGCAAGTCTGAAACAACGGAAGAG
CCCATCCCCATTGATGCATTGAACATGGTGTGGTCGTTTGGTCTGAACAA
GCGCGTTCCTGCCATCAACATGACGGACGAGCAGCGCCGGCTGGTTCTGT
ACACGTGTGCGCACACCGCCGTGCTGTACGACTACAGCAACAACACACAG
AAACTGCTGCAGGGACATTGTAACATGATCTCCAGCACCTGTGTGAGTGA
GGACAGACGTTGGATCGCCACAGCAGACAGTGGACAGAACAGCATGGTCA
TCGTGTGGGACTCCTACTCATGCATCCCAGTGCAGACCCTGTTTGACCCC
CATGTCGGGGGCGTGACTACCATGGCGATGACCCCTGATGCTAAGTACCT
GGTGACGGTTAGCGCCGCCCAAACACAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000090 | genome | Sc0000090:467596..470802 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL96806_cuf13 |
| Biotype | protein_coding |
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