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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL96798_cuf0 >transcript:BL96798_cuf0-protein ID=transcript:BL96798_cuf0-protein|Name=transcript:BL96798_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=124bp
WSDATPTCKHRGISCSLGYFRCGHGRACILSWNRCDGVMNCTDGSDEEGC
VCLPMPEGFQLDSRLTMLPNQLAQMTFEEIQNSSAVELLDSSYSIPGEHH
LELRKFASAVIFPQCNVSEGNETH Run BLAST on NCBI mRNA from alignment at Sc0000071:383635..385601+ Legend: exonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL96798_cuf0 ID=transcript:BL96798_cuf0|Name=transcript:BL96798_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=1967bp|location=Sequence derived from alignment at Sc0000071:383635..385601+ (Branchiostoma lanceolatum)
TGGAGTGATGCTACACCAACTTGTAAACATCGAGGTAAAATTAACATCAT
TGGTCAGGGTTGAAATTTCCTGTTTAACTGTTCGTATATACAAGTGAGTT
ACTAATCCCATTCGAAGCTTTAAGACATGAATCCAACTCATGCTCAAATT
GACTTTGCCCCATCTTTAAATAGTCAACGTCCTTGCCTAACTTTCATTGT
TTGGTATATATCGAGGAATATGTGCCCAGGCGCGATTTGTCCATTTCGGA
CTGGGATGACGATGCAATAGATCACATGGCATTTGCACGCTTAAGATCAG
TAACTGTTAGACATAAGATTGTAAATGCATTGTAAATGTACGTTTTTCTT
CTACTAGATTAGAGTTCCTTCACTGCCCTGGTAGAAGAATTAGACCACAT
GCTTAAAGACTGTTTTATCAAAACACACTTTTTATATATGTGTATCAGTC
ATTATTTCATATGGCAGCTAACACTTAGTATAGGTTAGTGTTTCTATGTG
GATCGTTGCGTGATTGTTGTACGTATGCTATGATCGTTTTCTTCAGAACA
AATATCAGATTACTTCAAAATTCTAATGAACTCCATTTGTAAACTTTTTA
CATTCACATAGGAATCAGCTGCTCTCTAGGATACTTCCGCTGTGGACACG
GACGCGCATGTATCCTATCGTGGAATCGTTGTGATGGGGTCATGAACTGT
ACGGACGGGAGTGATGAGGAAGGTTGTGGTGAGTCACTGTCATGAGGTCA
TGTACCCTGGGATCCAGACNCAAGATCCAGACTATTTATCGGGCCTTTTA
GCCGGTTCCTTTTAGCCGGTTCCTTCTAGCCAATTCCTTCGGCGGCCCAG
AGCTCCAAGCCCGCCGATACCATAATTAGCGCACGGGGGAGTTCTAGCCC
GAGAGATGACCGGCCCTATTCCCCCCGGACTACAACTCCCCGGAGCGTTG
ATTAAATCGGGCGGGCTGACTCTCTTGGGCCACCGAAGGAAATCGTTAGC
GGCCCTGTCCCAGCCTGGGCTCCCAGGGTAGAGGTCATGCTGTGCATACA
CTTTGCAGTTGCTCGTAGAGTTGTAGTCCACGTAGACATGATATCCTTCC
AACTTAAATAGCACTGATCGCTTAACACTAGGTTATTTCTTATCAAAAAG
GGCAGTGTTGGATCATCGTGAAAGAAATAAAGATTGTACTAGATTGATAA
ACCCGCGTTATTTGTAAAGACTAGTGTTATGACAATGTTGAGGCAATTGT
GAATCCATGATTTCATAAAGTACACTGCACGGTCAAGCTTGTTTGAAGTG
ACCACTCAGAGGGACTAGAAGAAAGTGGGCAAATTATACAGGTGGTCCCT
ATAAATAAGCTTGACTGTACATTGTATTCATGAATTCATAATTGTTTCAA
CACAAGCCAAGAAAGAAATAAAAGTTCTGTAACATTTGTGTCATTATTGT
GTCACGAACATGATGCTACATGCTACTACAGACTTCAATCTCCAAATACA
TTTTTATTTATCATTTCGCATTTAGTTTTAAAAATTGCTGCTATGTCTAA
TCAGCAAAAGACTGAGAAAAATACTCATTTCTCTTGAATGGCTCTTGAAT
ATATATTCTCAAACAAAACAAACGCCTGATATCGTCAAATTTTTCTCCTT
TCTATGCTGCAGTTACCTACGGTTCCAAACACTTGTCTTCTTCTCAATCA
ATATCGTAAGCACAGAACTAAACTATTCTTTTTAAAACTTTTCAGTGTGC
CTGCCAATGCCTGAGGGTTTTCAACTCGACAGTAGACTGACAATGCTGCC
TAATCAGCTGGCCCAGATGACGTTTGAGGAGATCCAGAATTCCTCTGCCG
TGGAGCTTCTCGACAGCTCGTACAGCATCCCTGGAGAGCACCACCTAGAG
TTAAGGAAATTTGCCTCGGCGGTCATTTTTCCGCAATGCAATGTCTCCGA
AGGAAACGAGACTCACT Coding sequence (CDS) from alignment at Sc0000071:383635..385601+ >transcript:BL96798_cuf0 ID=transcript:BL96798_cuf0|Name=transcript:BL96798_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=1116bp|location=Sequence derived from alignment at Sc0000071:383635..385601+ (Branchiostoma lanceolatum)
TGGAGTGATGCTACACCAACTTGTAAACATCGAGGAATCAGCTGCTCTCT
AGGATACTTCCGCTGTGGACACGGACGCGCATGTATCCTATCGTGGAATC
GTTGTGATGGGGTCATGAACTGTACGGACGGGAGTGATGAGGAAGGTTGT
GTGTGCCTGCCAATGCCTGAGGGTTTTCAACTCGACAGTAGACTGACAAT
GCTGCCTAATCAGCTGGCCCAGATGACGTTTGAGGAGATCCAGAATTCCT
CTGCCGTGGAGCTTCTCGACAGCTCGTACAGCATCCCTGGAGAGCACCAC
CTAGAGTTAAGGAAATTTGCCTCGGCGGTCATTTTTCCGCAATGCAATGT
CTCCGAAGGAAACGAGACTCACTGGAGTGATGCTACACCAACTTGTAAAC
ATCGAGGAATCAGCTGCTCTCTAGGATACTTCCGCTGTGGACACGGACGC
GCATGTATCCTATCGTGGAATCGTTGTGATGGGGTCATGAACTGTACGGA
CGGGAGTGATGAGGAAGGTTGTGTGTGCCTGCCAATGCCTGAGGGTTTTC
AACTCGACAGTAGACTGACAATGCTGCCTAATCAGCTGGCCCAGATGACG
TTTGAGGAGATCCAGAATTCCTCTGCCGTGGAGCTTCTCGACAGCTCGTA
CAGCATCCCTGGAGAGCACCACCTAGAGTTAAGGAAATTTGCCTCGGCGG
TCATTTTTCCGCAATGCAATGTCTCCGAAGGAAACGAGACTCACTGGAGT
GATGCTACACCAACTTGTAAACATCGAGGAATCAGCTGCTCTCTAGGATA
CTTCCGCTGTGGACACGGACGCGCATGTATCCTATCGTGGAATCGTTGTG
ATGGGGTCATGAACTGTACGGACGGGAGTGATGAGGAAGGTTGTGTGTGC
CTGCCAATGCCTGAGGGTTTTCAACTCGACAGTAGACTGACAATGCTGCC
TAATCAGCTGGCCCAGATGACGTTTGAGGAGATCCAGAATTCCTCTGCCG
TGGAGCTTCTCGACAGCTCGTACAGCATCCCTGGAGAGCACCACCTAGAG
TTAAGGAAATTTGCCTCGGCGGTCATTTTTCCGCAATGCAATGTCTCCGA
AGGAAACGAGACTCAC
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000071 | genome | Sc0000071:383635..385601 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL96798_cuf0 |
| Biotype | protein_coding |
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