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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL96778_cuf9 >transcript:BL96778_cuf9-protein ID=transcript:BL96778_cuf9-protein|Name=transcript:BL96778_cuf9|organism=Branchiostoma lanceolatum|type=polypeptide|length=236bp
DGDDGDTISYSLSGTNNDHFAVDSSTGAVTTARVLERDGADGVSAYTLVL TATDTADNTGTATLSVTVNDVNDNSATCDPDVYYSTVEENTAAAAPVALL SCTDPDDGVNSDLAFSIVSGDDTAAKFDIDADTGQITTSSTAVDYDTDAM ETAGFRYVLYVSVTDQAADVSDRLTSTATVVVAVTSTNDNAPTFTSFASS VAVDEDASVGTTILSELSATDADKGADGVVSFSMIA Run BLAST on NCBI mRNA from alignment at Sc0000124:485017..486596- Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL96778_cuf9 ID=transcript:BL96778_cuf9|Name=transcript:BL96778_cuf9|organism=Branchiostoma lanceolatum|type=mRNA|length=1580bp|location=Sequence derived from alignment at Sc0000124:485017..486596- (Branchiostoma lanceolatum) CAGATGGAGACGACGGGGACACCATCTCATATTCCCTCTCAGGTGAGGCG
TTTTAAGCCACGGTTACACATACATCTAGCCGAATATGGCTTCTGACCAC
CAGCTAACCAAGGTTATTGGTAGGTAGGGAAAAGTCTGACCAGCTTTAGA
TTAAACAAATCTAACTCCTAAACACACCCTGACATTTCTAAAACATTTTG
TCCTCTTCTCACCAATGCAGGGACGAACAATGACCACTTCGCCGTTGACA
GCAGCACGGGTGCCGTGACCACCGCCAGGGTGCTGGAGCGGGACGGGGCG
GACGGCGTGTCGGCCTACACGCTCGTTCTCACCGCCACGGACACCGCCGA
TAACACGGGCACCGCCACGCTCTCCGTCACGGTCAACGACGTGAACGATA
ACAGCGCCACTTGCGATCCTGACGTGTACTACAGCACAGTGGAGGAGAAT
ACTGCAGCAGGTTGGGAACGCACTGATCTCCAAGTAGATGTGTAGATGAT
GTGTAGATGGTGTCGGGTTGTTTGGGGCATCTTTCTGTTCCCTCCTGCCT
TCTTGAATGACACCTAAGACACTTGGCTAAAAGAAGAAGGTCGCAATTAC
ATAAAGATGCCCGTATCGCCACTCGTCCCGCCTCAAGGCAGAGGCAGACG
AGGACGCCAGACTACCACATATTTGAACAGCCAACAGCTTCTGGAAGACT
ACAATGGCCAACTGAAACCAAAACAGATTTCTGACCTTAAGCTATTGTCG
ACAAAAGAAACGAACTGAAAGAAACTTAGTCACCTGCGTTATAGTCGATA
GATCAGGATGATGATTTGCCCCGATGTAAAGATAGCATCAAATCAAAATT
AAATCAAACTTTATTGTAAACGAACTGAGATAAGAATGTGTTTATTGTCT
GTCCATAGCTGCGCCCGTTGCCCTGCTGAGCTGTACCGATCCAGACGACG
GTGTGAACTCTGACCTCGCCTTCTCCATCGTCAGCGGCGACGACACTGCC
GCAAAATTCGACATCGACGCGGACACGGGACAGATTACGACATCGTCCAC
TGCGGTGGATTACGACACCGACGCCATGGAGACGGCCGGTTTTCGGTACG
TTCTGTACGTGAGCGTCACCGACCAGGCCGCGGATGTCTCCGACAGGCTC
ACCAGCACCGCGACGGTGGTCGTTGCGGTAAGGACATTCGTATTTTCACC
AAGTCATTGCACAATTTTAACATCTGCTAGAAATAGTGTATGGCTTTTAT
TGATCTATCTAGTCTATGAATATCACATGGAGGACGCGAGGAAGTAGCCT
GTTCGCTCCTCTGATCGCTTCCCTTGTCAAATATATATTACCAACAGGGA
AACACTACAAACCTTCGTGTATCAACATTCCTAAGGGATGGTTACTAAAA
GTGCACGCTATATGTTTTCAGGTAACGTCAACAAACGACAACGCGCCGAC
CTTCACAAGTTTCGCGTCGTCAGTGGCGGTTGACGAGGACGCGTCCGTCG
GCACCACGATCCTGTCCGAGCTGAGCGCGACGGATGCCGACAAGGGCGCG
GACGGAGTCGTCAGTTTCTCCATGATAGCC Coding sequence (CDS) from alignment at Sc0000124:485017..486596- >transcript:BL96778_cuf9 ID=transcript:BL96778_cuf9|Name=transcript:BL96778_cuf9|organism=Branchiostoma lanceolatum|type=CDS|length=2832bp|location=Sequence derived from alignment at Sc0000124:485017..486596- (Branchiostoma lanceolatum) GATGGAGACGACGGGGACACCATCTCATATTCCCTCTCAGGGACGAACAA TGACCACTTCGCCGTTGACAGCAGCACGGGTGCCGTGACCACCGCCAGGG TGCTGGAGCGGGACGGGGCGGACGGCGTGTCGGCCTACACGCTCGTTCTC ACCGCCACGGACACCGCCGATAACACGGGCACCGCCACGCTCTCCGTCAC GGTCAACGACGTGAACGATAACAGCGCCACTTGCGATCCTGACGTGTACT ACAGCACAGTGGAGGAGAATACTGCAGCAGCTGCGCCCGTTGCCCTGCTG AGCTGTACCGATCCAGACGACGGTGTGAACTCTGACCTCGCCTTCTCCAT CGTCAGCGGCGACGACACTGCCGCAAAATTCGACATCGACGCGGACACGG GACAGATTACGACATCGTCCACTGCGGTGGATTACGACACCGACGCCATG GAGACGGCCGGTTTTCGGTACGTTCTGTACGTGAGCGTCACCGACCAGGC CGCGGATGTCTCCGACAGGCTCACCAGCACCGCGACGGTGGTCGTTGCGG TAACGTCAACAAACGACAACGCGCCGACCTTCACAAGTTTCGCGTCGTCA GTGGCGGTTGACGAGGACGCGTCCGTCGGCACCACGATCCTGTCCGAGCT GAGCGCGACGGATGCCGACAAGGGCGCGGACGGAGTCGTCAGTTTCTCCA TGATAGCCGATGGAGACGACGGGGACACCATCTCATATTCCCTCTCAGGG ACGAACAATGACCACTTCGCCGTTGACAGCAGCACGGGTGCCGTGACCAC CGCCAGGGTGCTGGAGCGGGACGGGGCGGACGGCGTGTCGGCCTACACGC TCGTTCTCACCGCCACGGACACCGCCGATAACACGGGCACCGCCACGCTC TCCGTCACGGTCAACGACGTGAACGATAACAGCGCCACTTGCGATCCTGA CGTGTACTACAGCACAGTGGAGGAGAATACTGCAGCAGCTGCGCCCGTTG CCCTGCTGAGCTGTACCGATCCAGACGACGGTGTGAACTCTGACCTCGCC TTCTCCATCGTCAGCGGCGACGACACTGCCGCAAAATTCGACATCGACGC GGACACGGGACAGATTACGACATCGTCCACTGCGGTGGATTACGACACCG ACGCCATGGAGACGGCCGGTTTTCGGTACGTTCTGTACGTGAGCGTCACC GACCAGGCCGCGGATGTCTCCGACAGGCTCACCAGCACCGCGACGGTGGT CGTTGCGGTAACGTCAACAAACGACAACGCGCCGACCTTCACAAGTTTCG CGTCGTCAGTGGCGGTTGACGAGGACGCGTCCGTCGGCACCACGATCCTG TCCGAGCTGAGCGCGACGGATGCCGACAAGGGCGCGGACGGAGTCGTCAG TTTCTCCATGATAGCCGATGGAGACGACGGGGACACCATCTCATATTCCC TCTCAGGGACGAACAATGACCACTTCGCCGTTGACAGCAGCACGGGTGCC GTGACCACCGCCAGGGTGCTGGAGCGGGACGGGGCGGACGGCGTGTCGGC CTACACGCTCGTTCTCACCGCCACGGACACCGCCGATAACACGGGCACCG CCACGCTCTCCGTCACGGTCAACGACGTGAACGATAACAGCGCCACTTGC GATCCTGACGTGTACTACAGCACAGTGGAGGAGAATACTGCAGCAGCTGC GCCCGTTGCCCTGCTGAGCTGTACCGATCCAGACGACGGTGTGAACTCTG ACCTCGCCTTCTCCATCGTCAGCGGCGACGACACTGCCGCAAAATTCGAC ATCGACGCGGACACGGGACAGATTACGACATCGTCCACTGCGGTGGATTA CGACACCGACGCCATGGAGACGGCCGGTTTTCGGTACGTTCTGTACGTGA GCGTCACCGACCAGGCCGCGGATGTCTCCGACAGGCTCACCAGCACCGCG ACGGTGGTCGTTGCGGTAACGTCAACAAACGACAACGCGCCGACCTTCAC AAGTTTCGCGTCGTCAGTGGCGGTTGACGAGGACGCGTCCGTCGGCACCA CGATCCTGTCCGAGCTGAGCGCGACGGATGCCGACAAGGGCGCGGACGGA GTCGTCAGTTTCTCCATGATAGCCGATGGAGACGACGGGGACACCATCTC ATATTCCCTCTCAGGGACGAACAATGACCACTTCGCCGTTGACAGCAGCA CGGGTGCCGTGACCACCGCCAGGGTGCTGGAGCGGGACGGGGCGGACGGC GTGTCGGCCTACACGCTCGTTCTCACCGCCACGGACACCGCCGATAACAC GGGCACCGCCACGCTCTCCGTCACGGTCAACGACGTGAACGATAACAGCG CCACTTGCGATCCTGACGTGTACTACAGCACAGTGGAGGAGAATACTGCA GCAGCTGCGCCCGTTGCCCTGCTGAGCTGTACCGATCCAGACGACGGTGT GAACTCTGACCTCGCCTTCTCCATCGTCAGCGGCGACGACACTGCCGCAA AATTCGACATCGACGCGGACACGGGACAGATTACGACATCGTCCACTGCG GTGGATTACGACACCGACGCCATGGAGACGGCCGGTTTTCGGTACGTTCT GTACGTGAGCGTCACCGACCAGGCCGCGGATGTCTCCGACAGGCTCACCA GCACCGCGACGGTGGTCGTTGCGGTAACGTCAACAAACGACAACGCGCCG ACCTTCACAAGTTTCGCGTCGTCAGTGGCGGTTGACGAGGACGCGTCCGT CGGCACCACGATCCTGTCCGAGCTGAGCGCGACGGATGCCGACAAGGGCG CGGACGGAGTCGTCAGTTTCTCCATGATAGCC
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
Sc0000124 | genome | Sc0000124:485017..486596 - |
Properties
Property Name | Value |
Transcript id | BL96778_cuf9 |
Biotype | protein_coding |
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