transcript:BL96776_cuf7 (mRNA) - B. lanceolatum

Overview
Nametranscript:BL96776_cuf7
Unique Nametranscript:BL96776_cuf7
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

protein sequence of transcript:BL96776_cuf7

>transcript:BL96776_cuf7-protein ID=transcript:BL96776_cuf7-protein|Name=transcript:BL96776_cuf7|organism=Branchiostoma lanceolatum|type=polypeptide|length=114bp
EVLLTSQVDYDTMGAIKMVTLTVQAADGGSGSDQRSANATVEVTVNDVND
NQPVCTPSLYSRTLTEDATDGTVIASLNCSDVDTSTTLSYSITAGNSGPS
FEVSSTGVVTLIAG
Run BLAST on NCBI

mRNA from alignment at Sc0000124:481809..482928-

Legend: five_prime_UTRexonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>transcript:BL96776_cuf7 ID=transcript:BL96776_cuf7|Name=transcript:BL96776_cuf7|organism=Branchiostoma lanceolatum|type=mRNA|length=1120bp|location=Sequence derived from alignment at Sc0000124:481809..482928- (Branchiostoma lanceolatum)
GGGAGGTCCTGCTGACGTCACAGGTGGACTACGACACCATGGGGGCCATC AAGGTGATCATTGTGGTTGCATGCCAATTAAAAAAGCATTTTCTTTACAT AAGCAGGCAGCCAGGTATCCATCCTATTCGAATTATAGCTCCGGCTGGCT CGATCCTCCTGTCGTTTCCCTTTCCGAATTGTCTGGCATCCGTTAATGAA GAAACGATTGGCGCTTGGGTGTTTGCCTGAAATATAGGTGGAGGTTCGTT CTGATTGGCTCCAAGTCACATTATCCTCGTAACGGCATGACAAATGAAGG GAAACGATCAGAAGAGCGAACAGGAGCTAGAATAGGATGGATACCAGGCT AACAACCAAGTTGTGTGTAACAAAAAAGGTACTATTCCAAAGAGAGTGTG ATTTAATCGTCAGATGGTGACCCTAACGGTCCAGGCAGCAGACGGTGGCT CAGGCTCAGACCAGCGTAGCGCCAACGCCACGGTGGAGGTCACCGTCAAC GACGTGAACGACAACCAGCCTGTCTGCACACCGAGTCTCTACAGCAGGAC TCTTACCGAGGACGCTACAGATGGGACAGTGGTGGGTTAAAGTGTTTGAT ATCTAAGGGCATGGTCACCTTCACCGCACGACCGTCGTACGATTGCGAAT TGAGGACAATCTTGGGGTGGTCGCGCACATGTCGTACATAACGGTTGCCT TGTTACCGAAAAGGATAACTTATTTCCTTGTCTGTGGTTTGTTATGTCTC CCCCTCCTCGACAATCCTACGACAACAAAATCGTACGACGACCTACAATG AATGTGACCTACGCTGATGTAAGTCTTGACTTGTTTCTGTGAGTGTTTTG TGACATTTTGTAAGTCTTTCCAAAGCTACATTATTTTCACTGTACGCCGC GTCGTACACTTATTGGCAAGCGTACCATGGCTTCCAGTAATAGACGGCAA CACTTGAAAGTTAACACAAACATCTTTTTTCACTTTTGATTTGACAGATT GCGTCTTTAAACTGCTCGGATGTGGACACGTCGACTACGTTGTCTTACAG TATAACAGCGGGGAATTCTGGACCGTCGTTTGAAGTCAGCTCTACGGGGG TGGTTACCCTCATCGCCGGT

Coding sequence (CDS) from alignment at Sc0000124:481809..482928-

>transcript:BL96776_cuf7 ID=transcript:BL96776_cuf7|Name=transcript:BL96776_cuf7|organism=Branchiostoma lanceolatum|type=CDS|length=1026bp|location=Sequence derived from alignment at Sc0000124:481809..482928- (Branchiostoma lanceolatum)
GAGGTCCTGCTGACGTCACAGGTGGACTACGACACCATGGGGGCCATCAA
GATGGTGACCCTAACGGTCCAGGCAGCAGACGGTGGCTCAGGCTCAGACC
AGCGTAGCGCCAACGCCACGGTGGAGGTCACCGTCAACGACGTGAACGAC
AACCAGCCTGTCTGCACACCGAGTCTCTACAGCAGGACTCTTACCGAGGA
CGCTACAGATGGGACAGTGATTGCGTCTTTAAACTGCTCGGATGTGGACA
CGTCGACTACGTTGTCTTACAGTATAACAGCGGGGAATTCTGGACCGTCG
TTTGAAGTCAGCTCTACGGGGGTGGTTACCCTCATCGCCGGTGAGGTCCT
GCTGACGTCACAGGTGGACTACGACACCATGGGGGCCATCAAGATGGTGA
CCCTAACGGTCCAGGCAGCAGACGGTGGCTCAGGCTCAGACCAGCGTAGC
GCCAACGCCACGGTGGAGGTCACCGTCAACGACGTGAACGACAACCAGCC
TGTCTGCACACCGAGTCTCTACAGCAGGACTCTTACCGAGGACGCTACAG
ATGGGACAGTGATTGCGTCTTTAAACTGCTCGGATGTGGACACGTCGACT
ACGTTGTCTTACAGTATAACAGCGGGGAATTCTGGACCGTCGTTTGAAGT
CAGCTCTACGGGGGTGGTTACCCTCATCGCCGGTGAGGTCCTGCTGACGT
CACAGGTGGACTACGACACCATGGGGGCCATCAAGATGGTGACCCTAACG
GTCCAGGCAGCAGACGGTGGCTCAGGCTCAGACCAGCGTAGCGCCAACGC
CACGGTGGAGGTCACCGTCAACGACGTGAACGACAACCAGCCTGTCTGCA
CACCGAGTCTCTACAGCAGGACTCTTACCGAGGACGCTACAGATGGGACA
GTGATTGCGTCTTTAAACTGCTCGGATGTGGACACGTCGACTACGTTGTC
TTACAGTATAACAGCGGGGAATTCTGGACCGTCGTTTGAAGTCAGCTCTA
CGGGGGTGGTTACCCTCATCGCCGGT
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
gene:BL96776gene:BL96776Branchiostoma lanceolatumgene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
BL96776_cuf7-E1BL96776_cuf7-E1-1564476830-327510Branchiostoma lanceolatumexon
BL96776_cuf7-E2BL96776_cuf7-E2-1564476830-327507Branchiostoma lanceolatumexon
BL96776_cuf7-E3BL96776_cuf7-E3-1564476830-327505Branchiostoma lanceolatumexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
transcript:BL96776_cuf7transcript:BL96776_cuf7-proteinBranchiostoma lanceolatumpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000124genomeSc0000124:481809..482928 -
Properties
Property NameValue
Transcript idBL96776_cuf7
Biotypeprotein_coding