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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL96775_cuf4 >transcript:BL96775_cuf4-protein ID=transcript:BL96775_cuf4-protein|Name=transcript:BL96775_cuf4|organism=Branchiostoma lanceolatum|type=polypeptide|length=210bp
VISAGNDVGLFSVSSEGLISLAYGLDYETSTTHVLTVVATDGGTSPQLSG TATVYVQVTSVNEHDPVFDPASPANASVDENAPVGTTVATVSATDDDAGA DGELTYTITDTNPASFAGNFAIDSSSGVIKMASPMDFDTMGSDKVVTLTV QAVDGASGADQRTANTTVNVIVNDVNDNRPTCVEGLVSVVMDEDATNGTV VASMNCSDVD Run BLAST on NCBI mRNA from alignment at Sc0000124:478071..479498- Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL96775_cuf4 ID=transcript:BL96775_cuf4|Name=transcript:BL96775_cuf4|organism=Branchiostoma lanceolatum|type=mRNA|length=1428bp|location=Sequence derived from alignment at Sc0000124:478071..479498- (Branchiostoma lanceolatum) ACGTCATATCCGCCGGAAATGACGTCGGCCTGTTCAGCGTGTCGTCTGAA
GGTTTAATCTCCCTTGCCTACGGTTTAGACTACGAGACGTCCACGACTCA
CGTCCTGACGGTGGTGGCGACCGACGGGGGGACGTCACCGCAGCTGAGCG
GCACGGCGACGGTCTACGTCCAAGTGACGTCAGTGAACGAGCATGACCCA
GTCTTTGACCCGGCGTCCCCGGCAAACGCGTCCGTAAGTGTTCATCAAAA
TTTGATCTTTTCAGGATTTTGCTGATTAAACTGGTTCACAAAAACTGTAT
TTATATCACAGATTTATTGTCGACAACTTTACCACTTCTTGACCTCCTTA
CTCTGTAACGAAGATGAAAATTACAATCAGAATGCGCATACCTAACACAT
TATCTAAAATGTATTCCATAGGTCGACGAGAACGCTCCTGTAGGTACAAC
AGTCGCCACCGTGTCAGCAACGGACGACGACGCCGGCGCCGATGGCGAAC
TGACGTACACAATCACCGGTGGGTGTCCCATCTCAGCTAATTCTTTAGTC
ACAGGGACAGACCTGGATTCTGTTTGAACGCTACTGTTTTCGGGTTAACG
TTTCTTGAAGGAACGCTATGTGTGCAAAACAGAAGTCTTCAACTGGTTTG
ATTTTCTACCCCAGACACGAATCCAGCCAGTTTTGCCGGGAATTTTGCCA
TAGATTCCAGCAGTGGTGTCATCAAGATGGCTTCACCAATGGACTTCGAC
ACAATGGGGTCCGACAAGGTTAAGTGCGATTTTCTTTGATATATTCTGTA
TTTTCACTACTTTGTTTAAAGAAATAGATTTAACCACTTTCAAACTAGGA
ACTCTTCTAGTAGTATAGAGGATTTTGTTTGCTATATCGGTCTAGGGACT
GGTCAATGACAGTTTTGTTGTTCCTTTCCGTAAGGTGGTGACCCTGACAG
TGCAGGCGGTGGACGGAGCCTCGGGTGCCGACCAGCGCACCGCCAACACT
ACGGTGAACGTCATCGTCAACGACGTGAACGACAACAGGCCTACCTGCGT
GGAGGGACTTGTCAGCGTCGTCATGGATGAGGACGCTACCAACGGGACAG
TGGTCAGTACAAAAAAACTGCAAGGTATCTACAGTACTGTTAAGGGCAGG
TGTTAGGCACAATGATATGCCCGCGATATGGTATGAACGCGATCTTAAAT
GAAAAAGAAAATCGTTGACGATGCCCGAATGTGGTAGCCTGAGTGTCATC
CTGTTTCAAGTACCAGGCTCTGCCTTGTTTGGTGAAGGAAGAGCCTGGAA
CTGAAACAGGATGACACTCAGGCTACGAATATGGAAGGTAATATAAGAAA
TTATTTCTTTAATTCAAAATCTAAAGACTTATATCCACCTATATGTAGGT
TGCCTCCATGAACTGCAGCGACGTGGAC Coding sequence (CDS) from alignment at Sc0000124:478071..479498- >transcript:BL96775_cuf4 ID=transcript:BL96775_cuf4|Name=transcript:BL96775_cuf4|organism=Branchiostoma lanceolatum|type=CDS|length=3150bp|location=Sequence derived from alignment at Sc0000124:478071..479498- (Branchiostoma lanceolatum) GTCATATCCGCCGGAAATGACGTCGGCCTGTTCAGCGTGTCGTCTGAAGG TTTAATCTCCCTTGCCTACGGTTTAGACTACGAGACGTCCACGACTCACG TCCTGACGGTGGTGGCGACCGACGGGGGGACGTCACCGCAGCTGAGCGGC ACGGCGACGGTCTACGTCCAAGTGACGTCAGTGAACGAGCATGACCCAGT CTTTGACCCGGCGTCCCCGGCAAACGCGTCCGTCGACGAGAACGCTCCTG TAGGTACAACAGTCGCCACCGTGTCAGCAACGGACGACGACGCCGGCGCC GATGGCGAACTGACGTACACAATCACCGACACGAATCCAGCCAGTTTTGC CGGGAATTTTGCCATAGATTCCAGCAGTGGTGTCATCAAGATGGCTTCAC CAATGGACTTCGACACAATGGGGTCCGACAAGGTGGTGACCCTGACAGTG CAGGCGGTGGACGGAGCCTCGGGTGCCGACCAGCGCACCGCCAACACTAC GGTGAACGTCATCGTCAACGACGTGAACGACAACAGGCCTACCTGCGTGG AGGGACTTGTCAGCGTCGTCATGGATGAGGACGCTACCAACGGGACAGTG GTTGCCTCCATGAACTGCAGCGACGTGGACGTCATATCCGCCGGAAATGA CGTCGGCCTGTTCAGCGTGTCGTCTGAAGGTTTAATCTCCCTTGCCTACG GTTTAGACTACGAGACGTCCACGACTCACGTCCTGACGGTGGTGGCGACC GACGGGGGGACGTCACCGCAGCTGAGCGGCACGGCGACGGTCTACGTCCA AGTGACGTCAGTGAACGAGCATGACCCAGTCTTTGACCCGGCGTCCCCGG CAAACGCGTCCGTCGACGAGAACGCTCCTGTAGGTACAACAGTCGCCACC GTGTCAGCAACGGACGACGACGCCGGCGCCGATGGCGAACTGACGTACAC AATCACCGACACGAATCCAGCCAGTTTTGCCGGGAATTTTGCCATAGATT CCAGCAGTGGTGTCATCAAGATGGCTTCACCAATGGACTTCGACACAATG GGGTCCGACAAGGTGGTGACCCTGACAGTGCAGGCGGTGGACGGAGCCTC GGGTGCCGACCAGCGCACCGCCAACACTACGGTGAACGTCATCGTCAACG ACGTGAACGACAACAGGCCTACCTGCGTGGAGGGACTTGTCAGCGTCGTC ATGGATGAGGACGCTACCAACGGGACAGTGGTTGCCTCCATGAACTGCAG CGACGTGGACGTCATATCCGCCGGAAATGACGTCGGCCTGTTCAGCGTGT CGTCTGAAGGTTTAATCTCCCTTGCCTACGGTTTAGACTACGAGACGTCC ACGACTCACGTCCTGACGGTGGTGGCGACCGACGGGGGGACGTCACCGCA GCTGAGCGGCACGGCGACGGTCTACGTCCAAGTGACGTCAGTGAACGAGC ATGACCCAGTCTTTGACCCGGCGTCCCCGGCAAACGCGTCCGTCGACGAG AACGCTCCTGTAGGTACAACAGTCGCCACCGTGTCAGCAACGGACGACGA CGCCGGCGCCGATGGCGAACTGACGTACACAATCACCGACACGAATCCAG CCAGTTTTGCCGGGAATTTTGCCATAGATTCCAGCAGTGGTGTCATCAAG ATGGCTTCACCAATGGACTTCGACACAATGGGGTCCGACAAGGTGGTGAC CCTGACAGTGCAGGCGGTGGACGGAGCCTCGGGTGCCGACCAGCGCACCG CCAACACTACGGTGAACGTCATCGTCAACGACGTGAACGACAACAGGCCT ACCTGCGTGGAGGGACTTGTCAGCGTCGTCATGGATGAGGACGCTACCAA CGGGACAGTGGTTGCCTCCATGAACTGCAGCGACGTGGACGTCATATCCG CCGGAAATGACGTCGGCCTGTTCAGCGTGTCGTCTGAAGGTTTAATCTCC CTTGCCTACGGTTTAGACTACGAGACGTCCACGACTCACGTCCTGACGGT GGTGGCGACCGACGGGGGGACGTCACCGCAGCTGAGCGGCACGGCGACGG TCTACGTCCAAGTGACGTCAGTGAACGAGCATGACCCAGTCTTTGACCCG GCGTCCCCGGCAAACGCGTCCGTCGACGAGAACGCTCCTGTAGGTACAAC AGTCGCCACCGTGTCAGCAACGGACGACGACGCCGGCGCCGATGGCGAAC TGACGTACACAATCACCGACACGAATCCAGCCAGTTTTGCCGGGAATTTT GCCATAGATTCCAGCAGTGGTGTCATCAAGATGGCTTCACCAATGGACTT CGACACAATGGGGTCCGACAAGGTGGTGACCCTGACAGTGCAGGCGGTGG ACGGAGCCTCGGGTGCCGACCAGCGCACCGCCAACACTACGGTGAACGTC ATCGTCAACGACGTGAACGACAACAGGCCTACCTGCGTGGAGGGACTTGT CAGCGTCGTCATGGATGAGGACGCTACCAACGGGACAGTGGTTGCCTCCA TGAACTGCAGCGACGTGGACGTCATATCCGCCGGAAATGACGTCGGCCTG TTCAGCGTGTCGTCTGAAGGTTTAATCTCCCTTGCCTACGGTTTAGACTA CGAGACGTCCACGACTCACGTCCTGACGGTGGTGGCGACCGACGGGGGGA CGTCACCGCAGCTGAGCGGCACGGCGACGGTCTACGTCCAAGTGACGTCA GTGAACGAGCATGACCCAGTCTTTGACCCGGCGTCCCCGGCAAACGCGTC CGTCGACGAGAACGCTCCTGTAGGTACAACAGTCGCCACCGTGTCAGCAA CGGACGACGACGCCGGCGCCGATGGCGAACTGACGTACACAATCACCGAC ACGAATCCAGCCAGTTTTGCCGGGAATTTTGCCATAGATTCCAGCAGTGG TGTCATCAAGATGGCTTCACCAATGGACTTCGACACAATGGGGTCCGACA AGGTGGTGACCCTGACAGTGCAGGCGGTGGACGGAGCCTCGGGTGCCGAC CAGCGCACCGCCAACACTACGGTGAACGTCATCGTCAACGACGTGAACGA CAACAGGCCTACCTGCGTGGAGGGACTTGTCAGCGTCGTCATGGATGAGG ACGCTACCAACGGGACAGTGGTTGCCTCCATGAACTGCAGCGACGTGGAC
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
Sc0000124 | genome | Sc0000124:478071..479498 - |
Properties
Property Name | Value |
Transcript id | BL96775_cuf4 |
Biotype | protein_coding |
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