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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL96775_cuf4 >transcript:BL96775_cuf4-protein ID=transcript:BL96775_cuf4-protein|Name=transcript:BL96775_cuf4|organism=Branchiostoma lanceolatum|type=polypeptide|length=210bp
VISAGNDVGLFSVSSEGLISLAYGLDYETSTTHVLTVVATDGGTSPQLSG
TATVYVQVTSVNEHDPVFDPASPANASVDENAPVGTTVATVSATDDDAGA
DGELTYTITDTNPASFAGNFAIDSSSGVIKMASPMDFDTMGSDKVVTLTV
QAVDGASGADQRTANTTVNVIVNDVNDNRPTCVEGLVSVVMDEDATNGTV
VASMNCSDVD Run BLAST on NCBI mRNA from alignment at Sc0000124:478071..479498- Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL96775_cuf4 ID=transcript:BL96775_cuf4|Name=transcript:BL96775_cuf4|organism=Branchiostoma lanceolatum|type=mRNA|length=1428bp|location=Sequence derived from alignment at Sc0000124:478071..479498- (Branchiostoma lanceolatum)
ACGTCATATCCGCCGGAAATGACGTCGGCCTGTTCAGCGTGTCGTCTGAA
GGTTTAATCTCCCTTGCCTACGGTTTAGACTACGAGACGTCCACGACTCA
CGTCCTGACGGTGGTGGCGACCGACGGGGGGACGTCACCGCAGCTGAGCG
GCACGGCGACGGTCTACGTCCAAGTGACGTCAGTGAACGAGCATGACCCA
GTCTTTGACCCGGCGTCCCCGGCAAACGCGTCCGTAAGTGTTCATCAAAA
TTTGATCTTTTCAGGATTTTGCTGATTAAACTGGTTCACAAAAACTGTAT
TTATATCACAGATTTATTGTCGACAACTTTACCACTTCTTGACCTCCTTA
CTCTGTAACGAAGATGAAAATTACAATCAGAATGCGCATACCTAACACAT
TATCTAAAATGTATTCCATAGGTCGACGAGAACGCTCCTGTAGGTACAAC
AGTCGCCACCGTGTCAGCAACGGACGACGACGCCGGCGCCGATGGCGAAC
TGACGTACACAATCACCGGTGGGTGTCCCATCTCAGCTAATTCTTTAGTC
ACAGGGACAGACCTGGATTCTGTTTGAACGCTACTGTTTTCGGGTTAACG
TTTCTTGAAGGAACGCTATGTGTGCAAAACAGAAGTCTTCAACTGGTTTG
ATTTTCTACCCCAGACACGAATCCAGCCAGTTTTGCCGGGAATTTTGCCA
TAGATTCCAGCAGTGGTGTCATCAAGATGGCTTCACCAATGGACTTCGAC
ACAATGGGGTCCGACAAGGTTAAGTGCGATTTTCTTTGATATATTCTGTA
TTTTCACTACTTTGTTTAAAGAAATAGATTTAACCACTTTCAAACTAGGA
ACTCTTCTAGTAGTATAGAGGATTTTGTTTGCTATATCGGTCTAGGGACT
GGTCAATGACAGTTTTGTTGTTCCTTTCCGTAAGGTGGTGACCCTGACAG
TGCAGGCGGTGGACGGAGCCTCGGGTGCCGACCAGCGCACCGCCAACACT
ACGGTGAACGTCATCGTCAACGACGTGAACGACAACAGGCCTACCTGCGT
GGAGGGACTTGTCAGCGTCGTCATGGATGAGGACGCTACCAACGGGACAG
TGGTCAGTACAAAAAAACTGCAAGGTATCTACAGTACTGTTAAGGGCAGG
TGTTAGGCACAATGATATGCCCGCGATATGGTATGAACGCGATCTTAAAT
GAAAAAGAAAATCGTTGACGATGCCCGAATGTGGTAGCCTGAGTGTCATC
CTGTTTCAAGTACCAGGCTCTGCCTTGTTTGGTGAAGGAAGAGCCTGGAA
CTGAAACAGGATGACACTCAGGCTACGAATATGGAAGGTAATATAAGAAA
TTATTTCTTTAATTCAAAATCTAAAGACTTATATCCACCTATATGTAGGT
TGCCTCCATGAACTGCAGCGACGTGGAC Coding sequence (CDS) from alignment at Sc0000124:478071..479498- >transcript:BL96775_cuf4 ID=transcript:BL96775_cuf4|Name=transcript:BL96775_cuf4|organism=Branchiostoma lanceolatum|type=CDS|length=3150bp|location=Sequence derived from alignment at Sc0000124:478071..479498- (Branchiostoma lanceolatum)
GTCATATCCGCCGGAAATGACGTCGGCCTGTTCAGCGTGTCGTCTGAAGG
TTTAATCTCCCTTGCCTACGGTTTAGACTACGAGACGTCCACGACTCACG
TCCTGACGGTGGTGGCGACCGACGGGGGGACGTCACCGCAGCTGAGCGGC
ACGGCGACGGTCTACGTCCAAGTGACGTCAGTGAACGAGCATGACCCAGT
CTTTGACCCGGCGTCCCCGGCAAACGCGTCCGTCGACGAGAACGCTCCTG
TAGGTACAACAGTCGCCACCGTGTCAGCAACGGACGACGACGCCGGCGCC
GATGGCGAACTGACGTACACAATCACCGACACGAATCCAGCCAGTTTTGC
CGGGAATTTTGCCATAGATTCCAGCAGTGGTGTCATCAAGATGGCTTCAC
CAATGGACTTCGACACAATGGGGTCCGACAAGGTGGTGACCCTGACAGTG
CAGGCGGTGGACGGAGCCTCGGGTGCCGACCAGCGCACCGCCAACACTAC
GGTGAACGTCATCGTCAACGACGTGAACGACAACAGGCCTACCTGCGTGG
AGGGACTTGTCAGCGTCGTCATGGATGAGGACGCTACCAACGGGACAGTG
GTTGCCTCCATGAACTGCAGCGACGTGGACGTCATATCCGCCGGAAATGA
CGTCGGCCTGTTCAGCGTGTCGTCTGAAGGTTTAATCTCCCTTGCCTACG
GTTTAGACTACGAGACGTCCACGACTCACGTCCTGACGGTGGTGGCGACC
GACGGGGGGACGTCACCGCAGCTGAGCGGCACGGCGACGGTCTACGTCCA
AGTGACGTCAGTGAACGAGCATGACCCAGTCTTTGACCCGGCGTCCCCGG
CAAACGCGTCCGTCGACGAGAACGCTCCTGTAGGTACAACAGTCGCCACC
GTGTCAGCAACGGACGACGACGCCGGCGCCGATGGCGAACTGACGTACAC
AATCACCGACACGAATCCAGCCAGTTTTGCCGGGAATTTTGCCATAGATT
CCAGCAGTGGTGTCATCAAGATGGCTTCACCAATGGACTTCGACACAATG
GGGTCCGACAAGGTGGTGACCCTGACAGTGCAGGCGGTGGACGGAGCCTC
GGGTGCCGACCAGCGCACCGCCAACACTACGGTGAACGTCATCGTCAACG
ACGTGAACGACAACAGGCCTACCTGCGTGGAGGGACTTGTCAGCGTCGTC
ATGGATGAGGACGCTACCAACGGGACAGTGGTTGCCTCCATGAACTGCAG
CGACGTGGACGTCATATCCGCCGGAAATGACGTCGGCCTGTTCAGCGTGT
CGTCTGAAGGTTTAATCTCCCTTGCCTACGGTTTAGACTACGAGACGTCC
ACGACTCACGTCCTGACGGTGGTGGCGACCGACGGGGGGACGTCACCGCA
GCTGAGCGGCACGGCGACGGTCTACGTCCAAGTGACGTCAGTGAACGAGC
ATGACCCAGTCTTTGACCCGGCGTCCCCGGCAAACGCGTCCGTCGACGAG
AACGCTCCTGTAGGTACAACAGTCGCCACCGTGTCAGCAACGGACGACGA
CGCCGGCGCCGATGGCGAACTGACGTACACAATCACCGACACGAATCCAG
CCAGTTTTGCCGGGAATTTTGCCATAGATTCCAGCAGTGGTGTCATCAAG
ATGGCTTCACCAATGGACTTCGACACAATGGGGTCCGACAAGGTGGTGAC
CCTGACAGTGCAGGCGGTGGACGGAGCCTCGGGTGCCGACCAGCGCACCG
CCAACACTACGGTGAACGTCATCGTCAACGACGTGAACGACAACAGGCCT
ACCTGCGTGGAGGGACTTGTCAGCGTCGTCATGGATGAGGACGCTACCAA
CGGGACAGTGGTTGCCTCCATGAACTGCAGCGACGTGGACGTCATATCCG
CCGGAAATGACGTCGGCCTGTTCAGCGTGTCGTCTGAAGGTTTAATCTCC
CTTGCCTACGGTTTAGACTACGAGACGTCCACGACTCACGTCCTGACGGT
GGTGGCGACCGACGGGGGGACGTCACCGCAGCTGAGCGGCACGGCGACGG
TCTACGTCCAAGTGACGTCAGTGAACGAGCATGACCCAGTCTTTGACCCG
GCGTCCCCGGCAAACGCGTCCGTCGACGAGAACGCTCCTGTAGGTACAAC
AGTCGCCACCGTGTCAGCAACGGACGACGACGCCGGCGCCGATGGCGAAC
TGACGTACACAATCACCGACACGAATCCAGCCAGTTTTGCCGGGAATTTT
GCCATAGATTCCAGCAGTGGTGTCATCAAGATGGCTTCACCAATGGACTT
CGACACAATGGGGTCCGACAAGGTGGTGACCCTGACAGTGCAGGCGGTGG
ACGGAGCCTCGGGTGCCGACCAGCGCACCGCCAACACTACGGTGAACGTC
ATCGTCAACGACGTGAACGACAACAGGCCTACCTGCGTGGAGGGACTTGT
CAGCGTCGTCATGGATGAGGACGCTACCAACGGGACAGTGGTTGCCTCCA
TGAACTGCAGCGACGTGGACGTCATATCCGCCGGAAATGACGTCGGCCTG
TTCAGCGTGTCGTCTGAAGGTTTAATCTCCCTTGCCTACGGTTTAGACTA
CGAGACGTCCACGACTCACGTCCTGACGGTGGTGGCGACCGACGGGGGGA
CGTCACCGCAGCTGAGCGGCACGGCGACGGTCTACGTCCAAGTGACGTCA
GTGAACGAGCATGACCCAGTCTTTGACCCGGCGTCCCCGGCAAACGCGTC
CGTCGACGAGAACGCTCCTGTAGGTACAACAGTCGCCACCGTGTCAGCAA
CGGACGACGACGCCGGCGCCGATGGCGAACTGACGTACACAATCACCGAC
ACGAATCCAGCCAGTTTTGCCGGGAATTTTGCCATAGATTCCAGCAGTGG
TGTCATCAAGATGGCTTCACCAATGGACTTCGACACAATGGGGTCCGACA
AGGTGGTGACCCTGACAGTGCAGGCGGTGGACGGAGCCTCGGGTGCCGAC
CAGCGCACCGCCAACACTACGGTGAACGTCATCGTCAACGACGTGAACGA
CAACAGGCCTACCTGCGTGGAGGGACTTGTCAGCGTCGTCATGGATGAGG
ACGCTACCAACGGGACAGTGGTTGCCTCCATGAACTGCAGCGACGTGGAC
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000124 | genome | Sc0000124:478071..479498 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL96775_cuf4 |
| Biotype | protein_coding |
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