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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL96637_cuf17 >transcript:BL96637_cuf17-protein ID=transcript:BL96637_cuf17-protein|Name=transcript:BL96637_cuf17|organism=Branchiostoma lanceolatum|type=polypeptide|length=186bp
MPVTKQYLRYVPASMWGVVASPKAPVVQLCLRGVKGRYVAVAAVEHVFIW
DLRMGEKLIVLKGGKFEVTGLAASPDNLHIAVGYHDGAVQVFSFVTGEVV
VVFSGHKAAVTALRYDTSGMRLASGSKDTDVIVWDIVNESGLYRLKGHKG
VITHCHFLKGRNFLITSSKDTFVKWWDLDTQHCFRT Run BLAST on NCBI mRNA from alignment at Sc0000486:112533..116355- Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL96637_cuf17 ID=transcript:BL96637_cuf17|Name=transcript:BL96637_cuf17|organism=Branchiostoma lanceolatum|type=mRNA|length=3823bp|location=Sequence derived from alignment at Sc0000486:112533..116355- (Branchiostoma lanceolatum)
TATTGCAACATTATTCCACATTGGACGTTGTACTGCAGTTTGCACAACCA
TCGCTAGATGTCGCTATAATTAGTTTCCAGGTCAGAGGTCACTGTACACA
TGTGCGCGCACGTCGCTGTTTCGCTCATCGGTTCAACTTTCGTCTCGGAT
TTGAGCTTTGAGGGAGACTGATTCAGCGCCAGCTCATTGGTAGGTACCGA
AAAACGTACGTCTTTCAGTTTAGCGCTTCCCTAATCACGAAGGATTCTAG
ATCTTCTCGATGTGCTGTCTAAAAGAACGGTGGGGTGGGGAGGGGGGCAA
GGCCCACCATTATTACTCTTCTTATGTTCCTTTAATGAAACATAGATGTT
TGTTACGTGTATAAGTTGTGATGTTCACTGTGTTCTACGTTCTCAGCCTG
TACATTCGTCTCCCTTTGGTTAGTCTTTGTGTCACTGCATACTAGCTAAG
TACGAGTAAGCCAGTGCATGTAAAATAGCGATATTTTCCCGCACAGTTCC
ACCATGCCGGTGACTAAACAGTACCCCGCTATGTTCCCAGTTTGAGTGTT
TTTGTGTCCCACACATGTACAGTTCCACGATGCCGGTGACTAAACAGTAC
CCCGCTATGTTCCCAGTTTGAGTGTTTTTGTGTCCCACACATGTACAGTT
CCACGATGCCGGTGACTAAACAGTACCCCGCTATGTTCCCAGTTTGAGTG
TTTTTGTGTCCCACACATGTACAGTTCCACGATGCCGGTGACTAAACAGT
ACCCCGCTATGTTCCCAGTTTGAGTGTTTTTGTGTCCCACACATGTACAG
TTCCACGATGCCGGTGACTAAACAGTACCCCGCTATGTTCCCAGTTTGAG
TGTTTTTGTGTCCCACACATGTACAGTTCCACGATGCCGGTGACTAAACA
GTACCCCGCTATGTTCCCAGTTTGAGTGTTTTTGTGTCCCACACATGTAC
AGTTCCACGATGCCGGTGACTAAACAGTACCCCGCTATGTTCCCAGTTTG
AGTGTTTTTGTGTCCCACACATGTACAGTTCCACGATGCCGGTGACTAAA
CAGTACCCCGCTATGTTCCCAGTTTGAGTGTTTTTGTGTCCCACACATGT
ACAGTTCCACGATGCCGGTGACTAAACAGTACCCCGCTATGTTCCCAGTT
TGAGTGTTTTTGTGTCCCACACATGTACAGTTCCACGATGCCGGTGACTA
AACAGTACCCCGCTATGTTCCCAGTTTGAGTGTTTTTGTGTCCCACACAT
GTACAGTTCCACGATGCCGGTGACTAAACAGTACCCCGCTATGTTCCCAG
TTTGAGTGTTTTTGTGTCCCACACATGTACAGTTCCACGATGCCGGTGAC
TAAACAGTACCCCGCTATGTTCCCAGTTTGAGTGTTTTTGTGTCCCACAC
ATGTACAGTTCCACGATGCCGGTGACTAAACAGTACCCCGCTATGTTCCC
AGTTTGAGTGTTTTTGTGTCCCACACATGTACAGTTCCACCATGCCGGTG
ACTAAACAGTACCTCCGCTACGTTCCGGCCTCCATGTGGGGTGTGGTCGC
CAGCCCCAAGGCCCCTGTGGTGCAGCTCTGTCTGCGCGGTGTGAAGGGAC
GATATGTAGCAGTGGCTGCCGTCGAGCACGTCTTCATCTGGGACCTACGG
ATGGGAGAGAAGGTGAGATGTTTTGTTTTTTGTCTTACCTGGGCTACTGG
TGTTCCGTACCATGTGATAACTTGGGTTATCACGCAGGCTCTACTTTTGT
CACATTGCCTTCCATGCGAATATTGCGAATGTCGAGTGTGCCGAGTGCAC
CGCTGTCAAAAATTCGAATACAGGATACAAAAGTTGTAATTGTGGGACTG
GCTGTTACAATATTTTCTTTGAGTACACCAAATTTCTTAACTTCCGCTCT
GGCGCATTTCTCAGGTGGGTATGAGTCTATGACATAAATAAAATACAACA
CGGCGTATTTCGCATCACCCTCGGTCCCAGCCCACCTGTAAGTTGGATCC
GACCCAGTACTGACCTGTGTGTTGTTCAGGACTGTTTTAGGTACAGCAAA
GGAAGGCAGTACTAGTACTGAACTGTGTGTTGTTCTCCCATGTCCACAGC
TGGTTGTACTAGTACTGACCTGTGTGTTGTTCTCCCATGTCCACAGCTGA
TTGTGCTAGTACTGACCTGTATGTTGTTCTCCCATGTCCACAGCTGTTTG
TGCTCGTACTGAACTATGTGTTGTTCAGGACTGTTTTAGGTACAGCAAAG
GGAGGCAGTACTAGTACTGAACTGTTTGGATTGTTGTTTCTCCCATGTCC
ACAGCTGATTGTGCTGAAAGGCGGGAAGTTTGAGGTCACAGGTCTGGCTG
CTAGTCCAGATAACCTGCACATCGCGGTCGGGTAGGCAAATTTTCTTCTT
CTCTTCAAGTTCAACAACACACTGTAAACTAGGCTAGCTAGGTTACAACA
AGTTTACTAACTTTAGAATAGCAGGTTACTCAGTCATTCATGTTGATCGA
CAGGTTGATGTTGATTGCCCAGTGTGTTGATTGACAGGTGTCCTGATGTT
GATTGACAGGTGTCCTGATGTTGATTGACAGGTGTCCTGATGTTGATTGA
CAGGTGTCCTGATGTTGATTGACAGGTACCATGACGGCGCGGTGCAGGTG
TTCAGCTTCGTGACGGGGGAAGTTGTAGTCGTGTTCAGCGGACACAAAGC
GGCCGTCACGGCGCTTAGATACGACACCAGCGGCATGAGACTGGCCTCAG
GGTCAAAGGTCAGCAGGGTTAACCCTCTCATGAACATATTGTTCTTATTT
TGCTCACAATTGTCTTTTTTAGCCTTGAAATAAGCCTTTTTTTCATCCGC
ATGATATTGCCTTGAAAACATCTTAATTTTGCCCACTGGACACAGATGTA
ATCGTGTGGGACATTGTTAACGAATCCAGCCTGTACAGTACAGTAAGCTT
GTATAACCCTGCACAACAGTACTGTAAGCCTGTATAACCCTGTGCAGTTC
TGTAAGCCTATATAACCCTGTACAGTACTGCCATGTAGGCCTGTGTAAGT
ATAGTTCTGTAAGCCTGTATAAGTCTGTACAGTACTGTAGGCCTGTGTAA
GCCTGTTAAGCCTGTATAACCCTGTAAAGGCCTGTAATTTGAGTAACTAT
AAGCCTGTATTTTCCCCATGGCAGGACACAGATGTGATCGTGTGGGACAT
TGTTAACGAGTCGGGTCTCTACAGACTGAAGGGGCACAAAGGTGTGATCA
CCCACTGCCACTTTCTTAAAGGCAGAAACTTTCTCATCACAAGGTAAGGA
ACTGCCAACTTCTCAAGAATATACTGGAAATGCAGAAATGTTCGCGATGG
TTTTATGTTCACAGTTTTCTTGGCAGTATGTGACTATAGCACTGCTGCAA
ACTTAAAACCACAGCGAACACTCAATTTTCCCTTTAGCGCGAAATAAAAA
CCATTTGCAGTTACTGTAGTGAAGAACTGCCAGTGTCTGAAGAAAGTTGT
AAGGAACGGCTGATGGCTGAAAAACTTTATTTCCTGCTGAAAACTTCCCC
ATTCAACAACCGTGAGGAATAAAGATTTCCAGGGGCAACTTGTTCCCGTC
TTCATTTCAGGTCACCAAAACCAGCAGTTCCAAATACCCCCAGCACTCCA
TAGTATCACAGACTGTACCTCAAGGAAGAAAATGATAGATTCTTAAGACA
TTTACAATGACAATATACATGTCCACAAACAGCAAATGTTGTTATTGTTA
TTCTACTGCCAGCAGCTCTAAGGACACGTTTGTGAAGTGGTGGGACCTGG
ACACCCAGCACTGCTTCAGGACT Coding sequence (CDS) from alignment at Sc0000486:112533..116355- >transcript:BL96637_cuf17 ID=transcript:BL96637_cuf17|Name=transcript:BL96637_cuf17|organism=Branchiostoma lanceolatum|type=CDS|length=2790bp|location=Sequence derived from alignment at Sc0000486:112533..116355- (Branchiostoma lanceolatum)
ATGCCGGTGACTAAACAGTACCTCCGCTACGTTCCGGCCTCCATGTGGGG
TGTGGTCGCCAGCCCCAAGGCCCCTGTGGTGCAGCTCTGTCTGCGCGGTG
TGAAGGGACGATATGTAGCAGTGGCTGCCGTCGAGCACGTCTTCATCTGG
GACCTACGGATGGGAGAGAAGCTGATTGTGCTGAAAGGCGGGAAGTTTGA
GGTCACAGGTCTGGCTGCTAGTCCAGATAACCTGCACATCGCGGTCGGGT
ACCATGACGGCGCGGTGCAGGTGTTCAGCTTCGTGACGGGGGAAGTTGTA
GTCGTGTTCAGCGGACACAAAGCGGCCGTCACGGCGCTTAGATACGACAC
CAGCGGCATGAGACTGGCCTCAGGGTCAAAGGACACAGATGTGATCGTGT
GGGACATTGTTAACGAGTCGGGTCTCTACAGACTGAAGGGGCACAAAGGT
GTGATCACCCACTGCCACTTTCTTAAAGGCAGAAACTTTCTCATCACAAG
CTCTAAGGACACGTTTGTGAAGTGGTGGGACCTGGACACCCAGCACTGCT
TCAGGACTATGCCGGTGACTAAACAGTACCTCCGCTACGTTCCGGCCTCC
ATGTGGGGTGTGGTCGCCAGCCCCAAGGCCCCTGTGGTGCAGCTCTGTCT
GCGCGGTGTGAAGGGACGATATGTAGCAGTGGCTGCCGTCGAGCACGTCT
TCATCTGGGACCTACGGATGGGAGAGAAGCTGATTGTGCTGAAAGGCGGG
AAGTTTGAGGTCACAGGTCTGGCTGCTAGTCCAGATAACCTGCACATCGC
GGTCGGGTACCATGACGGCGCGGTGCAGGTGTTCAGCTTCGTGACGGGGG
AAGTTGTAGTCGTGTTCAGCGGACACAAAGCGGCCGTCACGGCGCTTAGA
TACGACACCAGCGGCATGAGACTGGCCTCAGGGTCAAAGGACACAGATGT
GATCGTGTGGGACATTGTTAACGAGTCGGGTCTCTACAGACTGAAGGGGC
ACAAAGGTGTGATCACCCACTGCCACTTTCTTAAAGGCAGAAACTTTCTC
ATCACAAGCTCTAAGGACACGTTTGTGAAGTGGTGGGACCTGGACACCCA
GCACTGCTTCAGGACTATGCCGGTGACTAAACAGTACCTCCGCTACGTTC
CGGCCTCCATGTGGGGTGTGGTCGCCAGCCCCAAGGCCCCTGTGGTGCAG
CTCTGTCTGCGCGGTGTGAAGGGACGATATGTAGCAGTGGCTGCCGTCGA
GCACGTCTTCATCTGGGACCTACGGATGGGAGAGAAGCTGATTGTGCTGA
AAGGCGGGAAGTTTGAGGTCACAGGTCTGGCTGCTAGTCCAGATAACCTG
CACATCGCGGTCGGGTACCATGACGGCGCGGTGCAGGTGTTCAGCTTCGT
GACGGGGGAAGTTGTAGTCGTGTTCAGCGGACACAAAGCGGCCGTCACGG
CGCTTAGATACGACACCAGCGGCATGAGACTGGCCTCAGGGTCAAAGGAC
ACAGATGTGATCGTGTGGGACATTGTTAACGAGTCGGGTCTCTACAGACT
GAAGGGGCACAAAGGTGTGATCACCCACTGCCACTTTCTTAAAGGCAGAA
ACTTTCTCATCACAAGCTCTAAGGACACGTTTGTGAAGTGGTGGGACCTG
GACACCCAGCACTGCTTCAGGACTATGCCGGTGACTAAACAGTACCTCCG
CTACGTTCCGGCCTCCATGTGGGGTGTGGTCGCCAGCCCCAAGGCCCCTG
TGGTGCAGCTCTGTCTGCGCGGTGTGAAGGGACGATATGTAGCAGTGGCT
GCCGTCGAGCACGTCTTCATCTGGGACCTACGGATGGGAGAGAAGCTGAT
TGTGCTGAAAGGCGGGAAGTTTGAGGTCACAGGTCTGGCTGCTAGTCCAG
ATAACCTGCACATCGCGGTCGGGTACCATGACGGCGCGGTGCAGGTGTTC
AGCTTCGTGACGGGGGAAGTTGTAGTCGTGTTCAGCGGACACAAAGCGGC
CGTCACGGCGCTTAGATACGACACCAGCGGCATGAGACTGGCCTCAGGGT
CAAAGGACACAGATGTGATCGTGTGGGACATTGTTAACGAGTCGGGTCTC
TACAGACTGAAGGGGCACAAAGGTGTGATCACCCACTGCCACTTTCTTAA
AGGCAGAAACTTTCTCATCACAAGCTCTAAGGACACGTTTGTGAAGTGGT
GGGACCTGGACACCCAGCACTGCTTCAGGACTATGCCGGTGACTAAACAG
TACCTCCGCTACGTTCCGGCCTCCATGTGGGGTGTGGTCGCCAGCCCCAA
GGCCCCTGTGGTGCAGCTCTGTCTGCGCGGTGTGAAGGGACGATATGTAG
CAGTGGCTGCCGTCGAGCACGTCTTCATCTGGGACCTACGGATGGGAGAG
AAGCTGATTGTGCTGAAAGGCGGGAAGTTTGAGGTCACAGGTCTGGCTGC
TAGTCCAGATAACCTGCACATCGCGGTCGGGTACCATGACGGCGCGGTGC
AGGTGTTCAGCTTCGTGACGGGGGAAGTTGTAGTCGTGTTCAGCGGACAC
AAAGCGGCCGTCACGGCGCTTAGATACGACACCAGCGGCATGAGACTGGC
CTCAGGGTCAAAGGACACAGATGTGATCGTGTGGGACATTGTTAACGAGT
CGGGTCTCTACAGACTGAAGGGGCACAAAGGTGTGATCACCCACTGCCAC
TTTCTTAAAGGCAGAAACTTTCTCATCACAAGCTCTAAGGACACGTTTGT
GAAGTGGTGGGACCTGGACACCCAGCACTGCTTCAGGACT
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000486 | genome | Sc0000486:112533..116355 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL96637_cuf17 |
| Biotype | protein_coding |
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