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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL96610_cuf38 >transcript:BL96610_cuf38-protein ID=transcript:BL96610_cuf38-protein|Name=transcript:BL96610_cuf38|organism=Branchiostoma lanceolatum|type=polypeptide|length=250bp
PTFQRTGTQGDRWIQGEVEVNTTSPYQVVMEGIRGTGFRGDIALDDITMT
TGPCTSGTTYGINCDFEDSAICGYVQKTDDQFDWTWQTGSTGTSNTGPQS
DHTLGTSAGHYMYIETSSPRQPGDIAVLTTPSVPGDNRQHCLQFYYHMYG
LDIGTLRLWEVRGTDQPRIVWEVSGDQGNQWAAMQWAVTPSIDTYFMFEG
IRGNSFRGDISIDDVTYLNDRCIGASTGNCDFEAGPCTWTNTQVGDDFDW Run BLAST on NCBI mRNA from alignment at Sc0000000:3180687..3183297- Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL96610_cuf38 ID=transcript:BL96610_cuf38|Name=transcript:BL96610_cuf38|organism=Branchiostoma lanceolatum|type=mRNA|length=2611bp|location=Sequence derived from alignment at Sc0000000:3180687..3183297- (Branchiostoma lanceolatum)
CCAACCTTCCAGAGAACAGGCACACAGGGGGACCGGTGGATACAAGGAGA
AGTAGAAGTGAACACCACTAGTCCTTACCAGGTATGTTTGCTGGCCAATA
AAACTGCTTTTGCCTTTTGGATACTGTCATTGTCACCAATAGATCTGCTT
GGAAATTAATCGATTTGAGCGTCTTCTATATTGAAAGCTTAGAGCATTGC
TAACAAGACTTTTTCCTCTCCCTCCTTCAGGTTGTGATGGAGGGCATCCG
TGGTACAGGCTTCCGAGGAGACATCGCTCTAGATGACATCACCATGACAA
CGGGTCCTTGTACCTCAGGTACTATAGGAGTTTAAAATCTCATGTAAAAG
TTATCTATTTCTGTATACTCTGACTAGCGTTGCAAAATCTCTGCAAAGTG
ATCAATGTACAATCATATGATAGTTGAATGAGAGTAAGCTAGTGTGTTAC
GCCTAATGGCAGTCATACCAGCTATATTGATGCAGATACAGAACATATAA
GTGAGAAAAATGTACAGACTGAGTTTATTTCTTTTGTTGTCAATAGTGCT
GTGAAAGACAACAAAATGGAATAGTATCAAACAAAGGCACAGAAGAATAC
TAAAGAAAAGGCAAATTATACAATTTTTTTCCAGGCACCACATATGGTAT
AAACTGTGACTTTGAAGACAGTGCCATTTGTGGGTACGTGCAGAAGACTG
ATGACCAGTTTGACTGGACATGGCAGACTGGGTCCACCGGCACCAGCAAC
ACTGGACCCCAGAGTGACCACACACTGGGCACATCAGCCGGTCAGTTACA
CTTCCATTGTACTTCACTTAGTCACATAAAAGTTGTAAAGACACCACTAA
ATAAAGGAACTAATGATAAATCACCAAGCAAGAAAAGCTATTCCTTAAGT
CAGGAACCTAAGGGTGGCATGTAATGTGTAAAATAGACAATGGTTGTGTT
ACATTTTGTCAAGAAATTTACCAGAATCCTTAATATTTTACAGAGATGAG
AGTTTTTGATTTCTTATTTTGTATAACAAAGGCCCAGTAAAAATTCCTTC
CAAAATTCAACTGAATTTTCTCCACTGCATCATATATAAGACTTAAAACA
TTTTGCATTCATGACTGATATTCGTTGTTATTTCTTCTAAAACAACTTCT
TGGTTCAACCCAGGTCATTACATGTACATCGAGACCTCATCGCCACGGCA
ACCTGGTGACATCGCTGTCCTGACAACGCCTTCTGTTCCCGGCGACAACC
GCCAACACTGTCTCCAGTTCTACTACCACATGTACGGCTTAGACATTGGC
ACACTACGGCTGTGGGAGGTCAGTATCTGTTTATGTCATTAAATAAACAG
CTTTAAGATGTTTTTTTCTAGAAAGAGGGAGCTCACGCAGGCGGGGGGGG
GATTATATGGAAAAATCGATCGTTGAGGGAAGACTGTATGCTGGTGATTA
AGCTAAAATCTGAATTTCGACAAGGCAGCGCTGGGATGAAACAAGAAGGT
GCAGCGCCCCTCTTTCCTGAATTAGATGAACGCAACCTGGGTCTACCATC
AAACAATGTTTCAGACCTAACCTTTGCAACCAGTTGTAATCCACATTTAC
TAGTAAGAATGCCTCAGCCCTATAGTACATGTATATTGTGCTTACTGATG
ACAACATCCACTATGATAATTGGTCTTGGAAAAATCTTTGAACACCTCAA
AACTGGGTGGCTGATGCAGGTATTCTTGACAATGTGTCATGTTCTTTTCT
GAGATACATTGTTAACCATTTTTTATAATGCATTAATGTTTGGATGTTTT
TCCTCTGTATTCAGGTGCGGGGAACGGACCAACCACGCATCGTGTGGGAG
GTGTCAGGTGACCAGGGCAACCAATGGGCAGCCATGCAGTGGGCAGTCAC
TCCGAGCATCGACACCTACTTCATGTTCGAGGGTATCCGTGGCAACAGTT
TCCGGGGCGACATCTCTATCGATGATGTCACCTACCTTAATGACAGGTGC
ATTGGTGCCTCCACAGGTAGCTATGCTGTTTTTTTCCTGTAGTGGGCTCT
TTGTTTTTCTAGTCAACTTTAATGTAGTATGTAAATAGTATGTACTTTGT
CAGTTGTATGTTATTTTTGTACTTCAGGAAGATTAGCTACTTACTTGTTA
CATGAATGGTAGCTAAACGAGAAAATAAAGTATCCAAAGTCACCAAAGAT
TATAGGACAACCTGACAATTTTGCTGTGTTTAGTGCATTCCTATCTAAGA
TCAAGGGGAAAGTATGAAATTAGAGTATGCAACATTATGAGTTGCACTTA
CTCATTTGGACAAGTCTGGTAGGTTTATGGATGTGCTGAAATGCATCTTT
GACATATTTCTGACTGCATAAAGTCATGTTTCTTTAAGGTCAAATGTCAG
AGGTGATTGGGTCATTATTGCCAAAGGAGAGTCTAGGATGATGGTAAAAA
GAAGTCTTGTTAGTTTGTACACATTATGCAGTGTTGGAAAGAGGCATGAT
TGTAGTTTGATTGCCAAACATCTTCTTTGTTTCATGCGTAGGTAATTGTG
ATTTTGAAGCCGGCCCGTGCACGTGGACCAACACCCAGGTAGGAGACGAC
TTTGACTGGAC Coding sequence (CDS) from alignment at Sc0000000:3180687..3183297- >transcript:BL96610_cuf38 ID=transcript:BL96610_cuf38|Name=transcript:BL96610_cuf38|organism=Branchiostoma lanceolatum|type=CDS|length=4500bp|location=Sequence derived from alignment at Sc0000000:3180687..3183297- (Branchiostoma lanceolatum)
CCAACCTTCCAGAGAACAGGCACACAGGGGGACCGGTGGATACAAGGAGA
AGTAGAAGTGAACACCACTAGTCCTTACCAGGTTGTGATGGAGGGCATCC
GTGGTACAGGCTTCCGAGGAGACATCGCTCTAGATGACATCACCATGACA
ACGGGTCCTTGTACCTCAGGCACCACATATGGTATAAACTGTGACTTTGA
AGACAGTGCCATTTGTGGGTACGTGCAGAAGACTGATGACCAGTTTGACT
GGACATGGCAGACTGGGTCCACCGGCACCAGCAACACTGGACCCCAGAGT
GACCACACACTGGGCACATCAGCCGGTCATTACATGTACATCGAGACCTC
ATCGCCACGGCAACCTGGTGACATCGCTGTCCTGACAACGCCTTCTGTTC
CCGGCGACAACCGCCAACACTGTCTCCAGTTCTACTACCACATGTACGGC
TTAGACATTGGCACACTACGGCTGTGGGAGGTGCGGGGAACGGACCAACC
ACGCATCGTGTGGGAGGTGTCAGGTGACCAGGGCAACCAATGGGCAGCCA
TGCAGTGGGCAGTCACTCCGAGCATCGACACCTACTTCATGTTCGAGGGT
ATCCGTGGCAACAGTTTCCGGGGCGACATCTCTATCGATGATGTCACCTA
CCTTAATGACAGGTGCATTGGTGCCTCCACAGGTAATTGTGATTTTGAAG
CCGGCCCGTGCACGTGGACCAACACCCAGGTAGGAGACGACTTTGACTGG
CCAACCTTCCAGAGAACAGGCACACAGGGGGACCGGTGGATACAAGGAGA
AGTAGAAGTGAACACCACTAGTCCTTACCAGGTTGTGATGGAGGGCATCC
GTGGTACAGGCTTCCGAGGAGACATCGCTCTAGATGACATCACCATGACA
ACGGGTCCTTGTACCTCAGGCACCACATATGGTATAAACTGTGACTTTGA
AGACAGTGCCATTTGTGGGTACGTGCAGAAGACTGATGACCAGTTTGACT
GGACATGGCAGACTGGGTCCACCGGCACCAGCAACACTGGACCCCAGAGT
GACCACACACTGGGCACATCAGCCGGTCATTACATGTACATCGAGACCTC
ATCGCCACGGCAACCTGGTGACATCGCTGTCCTGACAACGCCTTCTGTTC
CCGGCGACAACCGCCAACACTGTCTCCAGTTCTACTACCACATGTACGGC
TTAGACATTGGCACACTACGGCTGTGGGAGGTGCGGGGAACGGACCAACC
ACGCATCGTGTGGGAGGTGTCAGGTGACCAGGGCAACCAATGGGCAGCCA
TGCAGTGGGCAGTCACTCCGAGCATCGACACCTACTTCATGTTCGAGGGT
ATCCGTGGCAACAGTTTCCGGGGCGACATCTCTATCGATGATGTCACCTA
CCTTAATGACAGGTGCATTGGTGCCTCCACAGGTAATTGTGATTTTGAAG
CCGGCCCGTGCACGTGGACCAACACCCAGGTAGGAGACGACTTTGACTGG
CCAACCTTCCAGAGAACAGGCACACAGGGGGACCGGTGGATACAAGGAGA
AGTAGAAGTGAACACCACTAGTCCTTACCAGGTTGTGATGGAGGGCATCC
GTGGTACAGGCTTCCGAGGAGACATCGCTCTAGATGACATCACCATGACA
ACGGGTCCTTGTACCTCAGGCACCACATATGGTATAAACTGTGACTTTGA
AGACAGTGCCATTTGTGGGTACGTGCAGAAGACTGATGACCAGTTTGACT
GGACATGGCAGACTGGGTCCACCGGCACCAGCAACACTGGACCCCAGAGT
GACCACACACTGGGCACATCAGCCGGTCATTACATGTACATCGAGACCTC
ATCGCCACGGCAACCTGGTGACATCGCTGTCCTGACAACGCCTTCTGTTC
CCGGCGACAACCGCCAACACTGTCTCCAGTTCTACTACCACATGTACGGC
TTAGACATTGGCACACTACGGCTGTGGGAGGTGCGGGGAACGGACCAACC
ACGCATCGTGTGGGAGGTGTCAGGTGACCAGGGCAACCAATGGGCAGCCA
TGCAGTGGGCAGTCACTCCGAGCATCGACACCTACTTCATGTTCGAGGGT
ATCCGTGGCAACAGTTTCCGGGGCGACATCTCTATCGATGATGTCACCTA
CCTTAATGACAGGTGCATTGGTGCCTCCACAGGTAATTGTGATTTTGAAG
CCGGCCCGTGCACGTGGACCAACACCCAGGTAGGAGACGACTTTGACTGG
CCAACCTTCCAGAGAACAGGCACACAGGGGGACCGGTGGATACAAGGAGA
AGTAGAAGTGAACACCACTAGTCCTTACCAGGTTGTGATGGAGGGCATCC
GTGGTACAGGCTTCCGAGGAGACATCGCTCTAGATGACATCACCATGACA
ACGGGTCCTTGTACCTCAGGCACCACATATGGTATAAACTGTGACTTTGA
AGACAGTGCCATTTGTGGGTACGTGCAGAAGACTGATGACCAGTTTGACT
GGACATGGCAGACTGGGTCCACCGGCACCAGCAACACTGGACCCCAGAGT
GACCACACACTGGGCACATCAGCCGGTCATTACATGTACATCGAGACCTC
ATCGCCACGGCAACCTGGTGACATCGCTGTCCTGACAACGCCTTCTGTTC
CCGGCGACAACCGCCAACACTGTCTCCAGTTCTACTACCACATGTACGGC
TTAGACATTGGCACACTACGGCTGTGGGAGGTGCGGGGAACGGACCAACC
ACGCATCGTGTGGGAGGTGTCAGGTGACCAGGGCAACCAATGGGCAGCCA
TGCAGTGGGCAGTCACTCCGAGCATCGACACCTACTTCATGTTCGAGGGT
ATCCGTGGCAACAGTTTCCGGGGCGACATCTCTATCGATGATGTCACCTA
CCTTAATGACAGGTGCATTGGTGCCTCCACAGGTAATTGTGATTTTGAAG
CCGGCCCGTGCACGTGGACCAACACCCAGGTAGGAGACGACTTTGACTGG
CCAACCTTCCAGAGAACAGGCACACAGGGGGACCGGTGGATACAAGGAGA
AGTAGAAGTGAACACCACTAGTCCTTACCAGGTTGTGATGGAGGGCATCC
GTGGTACAGGCTTCCGAGGAGACATCGCTCTAGATGACATCACCATGACA
ACGGGTCCTTGTACCTCAGGCACCACATATGGTATAAACTGTGACTTTGA
AGACAGTGCCATTTGTGGGTACGTGCAGAAGACTGATGACCAGTTTGACT
GGACATGGCAGACTGGGTCCACCGGCACCAGCAACACTGGACCCCAGAGT
GACCACACACTGGGCACATCAGCCGGTCATTACATGTACATCGAGACCTC
ATCGCCACGGCAACCTGGTGACATCGCTGTCCTGACAACGCCTTCTGTTC
CCGGCGACAACCGCCAACACTGTCTCCAGTTCTACTACCACATGTACGGC
TTAGACATTGGCACACTACGGCTGTGGGAGGTGCGGGGAACGGACCAACC
ACGCATCGTGTGGGAGGTGTCAGGTGACCAGGGCAACCAATGGGCAGCCA
TGCAGTGGGCAGTCACTCCGAGCATCGACACCTACTTCATGTTCGAGGGT
ATCCGTGGCAACAGTTTCCGGGGCGACATCTCTATCGATGATGTCACCTA
CCTTAATGACAGGTGCATTGGTGCCTCCACAGGTAATTGTGATTTTGAAG
CCGGCCCGTGCACGTGGACCAACACCCAGGTAGGAGACGACTTTGACTGG
CCAACCTTCCAGAGAACAGGCACACAGGGGGACCGGTGGATACAAGGAGA
AGTAGAAGTGAACACCACTAGTCCTTACCAGGTTGTGATGGAGGGCATCC
GTGGTACAGGCTTCCGAGGAGACATCGCTCTAGATGACATCACCATGACA
ACGGGTCCTTGTACCTCAGGCACCACATATGGTATAAACTGTGACTTTGA
AGACAGTGCCATTTGTGGGTACGTGCAGAAGACTGATGACCAGTTTGACT
GGACATGGCAGACTGGGTCCACCGGCACCAGCAACACTGGACCCCAGAGT
GACCACACACTGGGCACATCAGCCGGTCATTACATGTACATCGAGACCTC
ATCGCCACGGCAACCTGGTGACATCGCTGTCCTGACAACGCCTTCTGTTC
CCGGCGACAACCGCCAACACTGTCTCCAGTTCTACTACCACATGTACGGC
TTAGACATTGGCACACTACGGCTGTGGGAGGTGCGGGGAACGGACCAACC
ACGCATCGTGTGGGAGGTGTCAGGTGACCAGGGCAACCAATGGGCAGCCA
TGCAGTGGGCAGTCACTCCGAGCATCGACACCTACTTCATGTTCGAGGGT
ATCCGTGGCAACAGTTTCCGGGGCGACATCTCTATCGATGATGTCACCTA
CCTTAATGACAGGTGCATTGGTGCCTCCACAGGTAATTGTGATTTTGAAG
CCGGCCCGTGCACGTGGACCAACACCCAGGTAGGAGACGACTTTGACTGG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000000 | genome | Sc0000000:3180687..3183297 - |
Properties
| Property Name | Value |
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| Transcript id | BL96610_cuf38 |
| Biotype | protein_coding |
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