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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL96604_cuf28 >transcript:BL96604_cuf28-protein ID=transcript:BL96604_cuf28-protein|Name=transcript:BL96604_cuf28|organism=Branchiostoma lanceolatum|type=polypeptide|length=113bp
HMYGTHVDTLNVYLQEGNNLGTPVWTETGTQGDQWNQGQVAITKSATFKI
VFEGIRGNGYRGDIALDDIIVNTGACPGPGSTAQQCTFDDVGLCGYTQDT
QDDFDWTQASGTT Run BLAST on NCBI mRNA from alignment at Sc0000000:3120699..3121916- Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL96604_cuf28 ID=transcript:BL96604_cuf28|Name=transcript:BL96604_cuf28|organism=Branchiostoma lanceolatum|type=mRNA|length=1218bp|location=Sequence derived from alignment at Sc0000000:3120699..3121916- (Branchiostoma lanceolatum)
CCACATGTACGGCACACACGTGGACACTCTGAACGTGTACCTGCAGGAGG
GGAACAACCTGGGCACGCCAGTGTGGACTGAAACCGGCACGCAGGGAGAT
CAGTGGAACCAGGGACAAGTTGCCATCACCAAATCAGCAACATTTAAGGT
AACCTGAAGAGAGAAAAAAATATTCTGGGTATAAATTCATCAGTTGGTAA
ATGACAGGAATAACGCATTTGCCTCTGCCACCCTTTAGCTGTACCTTAAG
TCTGAGACATGCTAATTGCTGAAAGCACCACCATTTTGCAAAAACAAAAT
CAATCACAAAAAGATTTAATCTTTAATAAATTCAATAAAAGACACAATAT
ACTACATTTTGTCATTTTTCACATAAAGTCTTTGTGCAATTGAATCAAAC
TACATAATGGTCATTGAATTTGAAAGACATTTAGTGCTTTTCATGAATTT
TCCACGTCTTTTTTACAGATTGTGTTTGAAGGGATCCGTGGCAATGGGTA
CAGAGGAGACATTGCTCTAGATGACATCATTGTGAACACTGGGGCTTGTC
CCGGACCAGGTACGTACAAGGCTTAGCATTAATGGATCTTCTGCAGATTG
TGGGGATAGTCTAAGAACAAATGCCATTGGGTTCAAACCTTCCCCAATTG
CCCAAATGAATATGCTGATTGGGCAAGTGTATGTCAAGTAGTATCAGGTC
AGTGTGATTTTTCCATTAGTGAGATTTTTCCATGGGTTGTAGCCTGACTT
CACTCCTAGCAGCTCACCCAACTGACCAGCCATCTTGTCAGATGCCCATA
GAGCTAGCCGGCCCTAGCCTTCCAAATGCATGTATTGGATAATGATATGT
TGGCATCATAAGCCTTCCCTTCACAGTACCACTGACAGATTTGTTTCTAA
TCTGAAAAATAAAAGGAATTCCTTGCTGCTAATAGATATGCATAGGAAGC
TGTCATTCAAATTTTGGGGCAGTGAAAAGTTGGTTTGGGCCAGTAGATTT
TTTTATGTACAGTACTTGCCCTATAGAACAAGTAAAGTTTCTAAAACTTG
CCCAACCCTGACAGAAGAAGATTATAAGTACTAGAAGTCTCACAACCTGT
CCCTTCTCTCCCCAGGGAGTACAGCCCAGCAGTGCACTTTTGATGATGTC
GGCTTGTGCGGGTACACCCAGGACACCCAGGACGACTTTGACTGGACTCA
AGCCTCTGGCACTACAGG Coding sequence (CDS) from alignment at Sc0000000:3120699..3121916- >transcript:BL96604_cuf28 ID=transcript:BL96604_cuf28|Name=transcript:BL96604_cuf28|organism=Branchiostoma lanceolatum|type=CDS|length=1017bp|location=Sequence derived from alignment at Sc0000000:3120699..3121916- (Branchiostoma lanceolatum)
CACATGTACGGCACACACGTGGACACTCTGAACGTGTACCTGCAGGAGGG
GAACAACCTGGGCACGCCAGTGTGGACTGAAACCGGCACGCAGGGAGATC
AGTGGAACCAGGGACAAGTTGCCATCACCAAATCAGCAACATTTAAGATT
GTGTTTGAAGGGATCCGTGGCAATGGGTACAGAGGAGACATTGCTCTAGA
TGACATCATTGTGAACACTGGGGCTTGTCCCGGACCAGGGAGTACAGCCC
AGCAGTGCACTTTTGATGATGTCGGCTTGTGCGGGTACACCCAGGACACC
CAGGACGACTTTGACTGGACTCAAGCCTCTGGCACTACACACATGTACGG
CACACACGTGGACACTCTGAACGTGTACCTGCAGGAGGGGAACAACCTGG
GCACGCCAGTGTGGACTGAAACCGGCACGCAGGGAGATCAGTGGAACCAG
GGACAAGTTGCCATCACCAAATCAGCAACATTTAAGATTGTGTTTGAAGG
GATCCGTGGCAATGGGTACAGAGGAGACATTGCTCTAGATGACATCATTG
TGAACACTGGGGCTTGTCCCGGACCAGGGAGTACAGCCCAGCAGTGCACT
TTTGATGATGTCGGCTTGTGCGGGTACACCCAGGACACCCAGGACGACTT
TGACTGGACTCAAGCCTCTGGCACTACACACATGTACGGCACACACGTGG
ACACTCTGAACGTGTACCTGCAGGAGGGGAACAACCTGGGCACGCCAGTG
TGGACTGAAACCGGCACGCAGGGAGATCAGTGGAACCAGGGACAAGTTGC
CATCACCAAATCAGCAACATTTAAGATTGTGTTTGAAGGGATCCGTGGCA
ATGGGTACAGAGGAGACATTGCTCTAGATGACATCATTGTGAACACTGGG
GCTTGTCCCGGACCAGGGAGTACAGCCCAGCAGTGCACTTTTGATGATGT
CGGCTTGTGCGGGTACACCCAGGACACCCAGGACGACTTTGACTGGACTC
AAGCCTCTGGCACTACA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000000 | genome | Sc0000000:3120699..3121916 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL96604_cuf28 |
| Biotype | protein_coding |
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