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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL96594_cuf12 >transcript:BL96594_cuf12-protein ID=transcript:BL96594_cuf12-protein|Name=transcript:BL96594_cuf12|organism=Branchiostoma lanceolatum|type=polypeptide|length=337bp
PMPTTIAPPVTTQSPCQPGQFKCLEDNSCIDASKVCDYIMDCFTSSPSVM PSDEAMCGACTFERDQCGWTDISTGQYDWTRNQGPTSTANTGPSVDHTTQ TGQGHYMYVEGGSGLFLTPAAMQSVPLSQTSNVCQVRFYYHMYGPGVGVL RLMLDAAGDGSALTELWRNENDMGDAWQQATVNLAGQRDGYRLQFQGVPS SSGGGGWGFLLPDTDDMAVDDITFIQCDLGSDRDYNCTFESGLCGWHQST DDDFDWTRQQGATASSNTGPDNDHTTGTGYYVYVEASSPRQDGDIARLET GSLPATSTDGSCLSFWYHMFGPHIGSLSVHMQQEGQA Run BLAST on NCBI mRNA from alignment at Sc0000000:3071145..3074587- Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL96594_cuf12 ID=transcript:BL96594_cuf12|Name=transcript:BL96594_cuf12|organism=Branchiostoma lanceolatum|type=mRNA|length=3443bp|location=Sequence derived from alignment at Sc0000000:3071145..3074587- (Branchiostoma lanceolatum) CCCCCATGCCCACTACCATCGCCCCTCCGGTCACCACCCAGTCCCCCTGC
CAGCCCGGACAGTTCAAGTGTCTGGAGGATAACTCGTGCATCGATGCCAG
CAAAGTCTGTGACTACATCATGGACTGTTTCACCAGTTCTCCTTCTGTGA
TGCCTTCGGATGAAGCCATGTGTGGTAAGACTGAATGATATTACATATTC
TGGTATCCACATATACACTAGCCTCTTTGGAAAACTGGACTCTCTGAAAA
ATACAGTTACTATTCACAGTGATACCCACATCACACGAAAATGACATTTT
CGGCAGTCCTATGTAATTCGTAATATCTCAATCATCATGCAATTTGTAGG
GAGCAGTCTTCATTTGCAGGTAAATATGATAGGGTAGATTTCCAGGCAAA
GAAATTTGCTCTTGGGCATTTTTTGAGATTCCGTGACCTTTTTGCAATCA
ACAAATACGCCTAAAGCTCGTCATCTGTGTGACGGGCTTAGCTGTCATAA
CTACAGGTCACCCGATATTATGGAACCACTTTGTTTTACATTTCAGCAGG
ATAGGAATAAAGATACCATGATATACCACATATACCATGATACAGTTGAA
AGCATGTTCGTTTGAAATCCATTAAGAAGTGAAATGTACTGTAAATTTCA
TATAACTACTAGTATTATCATATATCATAGAAGACTTGAAGTCAACTGTA
TTTTTTCAAGTCCAAGTTTCCATACCCAAACCCCTTGTTATTTTAGGTGC
CTGTACCTTTGAACGTGACCAGTGCGGATGGACAGATATCAGTACTGGAC
AGTACGACTGGACAAGAAACCAAGGACCAACTTCTACAGCCAACACTGGA
CCATCGGTGGACCATACTACACAGACTGGACAGGGTAGGAATTATTCCTG
GAGAAAGCTCCCAGCTCATTTATGAATTTCATGACAAAGAAAGACAAAAT
TAATGTGTTCAACAAATTCTTGTTTGCACTCATTTGTTCATCAGTTTTTT
TGAGGGTCATTTTTTTCATCACTGAACTATAGCAAAAAGATTGAATAATT
CAGTTCTTCTGTTTGAATGCACAAAGTCTTACTGTTCATGTCTCTTGTGA
TGTTACATGTGCAGGTCACTACATGTATGTGGAGGGAGGCAGTGGACTGT
TCCTCACCCCAGCAGCCATGCAGAGCGTCCCGCTGTCACAAACATCCAAT
GTCTGTCAGGTGAGTTAAAAGTTGTACCTTAGTACACAAAGTTTCGGGGG
GTCAGATGCCAGTTTTGCTCCCAGTGCTCTGTTTCCATTTTGTCTATTTG
CTGAAATTTTACACTAAGAATGTTCAAGAAATAGGCCCATTCCAGTGCCC
CATCCACCTCAGTCAAAACATAAGAATGCAAAATAAAAACATAACATCAC
AATTAACTTGACGGACATGCAGCCACTCTCTTATAGGTTGAACCACTACT
TGCATTGCTATCATTGGTTGAAATGCTAGTTGCGATTGACAGTCAGGATC
AATCTATTATGATTATGTAGCCATTTCTCTATGAACAACTCTGTTGCAGG
TGCGTTTCTACTACCACATGTACGGCCCAGGTGTAGGCGTCCTGAGGCTG
ATGCTGGATGCTGCTGGGGACGGCAGCGCCCTGACAGAGCTGTGGAGAAA
TGAAAACGACATGGGAGATGCCTGGCAGCAGGCTACAGTCAACCTCGCTG
GACAGCGGGATGGCTACAGGGTAAAACAGAAATGCAAACTTTTTGACAGA
ATATTTCAGAGTTTTGCATCAAATACATACAATATAGACACCAAGAAGGC
TAGTATTTGGTACCTTTTGTCGCAGTGTAACTGTGTTTGGGGTTTAACAA
CATAACTGACACTATAGATGAATTTTCATGAAATTTGGTTTGAGGTTAGG
TCTTGACCTTTGTAGAAATTATTAGATTTTTGCCACTTGGCAGCTCTCCT
TAATACTGCAGTAAAACTTCCATTTTTCCATTGGGTTGCTTATTTCTTTG
ACTCCCTGAGGCAAACATACCAGACAATGGCTTTTGTCTTTAGCACACCA
AAGGAAGCAATATGTGACTCCTTATCATCACGATGATCATCATTTTTTCA
TGTCACGTATTGGTATCTCCTGTTAGAAACATGATAGCCTAGTAATGTAC
TACATTTTACAAAGTGCATCCTCCCATCCACAGCTTCAGTTCCAGGGAGT
GCCAAGCTCTTCTGGTGGTGGAGGCTGGGGCTTCCTCCTGCCTGACACAG
ACGATATGGCTGTTGATGACATCACCTTCATCCAATGTGACCTTGGCTCC
GACAGAGGTCAGACTGCTGCTTCTGTTACTTTCGTGTCATGATTTAATCC
AAACAGACTTGATTCTATGAGTGGAATTGTCTGGAGATATCATCTCTTCC
AAAATTTCTCAAAAAACAATTTGTTATCCATTTTGGCATTGGAGATTCAG
GGCTCAAAATCCATTTTTAAGAATAGGCGCACAGGAAAAATTTTGGTGCA
AACAAAGGTTCAAGTTTTTTTCTGACACTTAAATGTCCAGAATATGCTGT
ATACTGGTGTGCAGTAGTGCCTTTAAGTGCAGCCTTTGTTGCATGTTGTT
CTTGGCCAAGACGTTGAGTCTGTTTACCAATGTATATCGTTATTATACTT
GTATGCTAAGAGTTCACAATGTTTATTCCAGACTATAACTGTACGTTTGA
GAGCGGCCTGTGCGGATGGCACCAATCAACAGACGATGACTTTGACTGGA
CTCGACAGCAGGGGGCCACGGCCAGCAGCAACACTGGACCAGACAACGAC
CACACCACTGGCACAGGTAAGGACTGTCCCTGGTGCTGAACAGTTAGGTG
CTGTCTCTGGTGCTGAACTGCTTTTCAACCAGTAATAATCACATTTAAAT
TGGCCCTTTTAACATATGTTGAGGTGTAGCATATGTCCAGCAACATTTTG
ATTGGGAAAGGGCCAGACCACTGTAACTGCATTTAACATTTCAGGGATTT
AATATTGCAGTGGGGAGAAAATGGAGGGTTTGCGGTGGTTTTAAGTTTGT
GGTTGAAACTAAGGGGTAGGTGGGCAGATAAGACAAAAGAACATTTTTGC
AGTGGTTTTGAGTTTATGGTGAAGAGGTCACTGCAAAAATCGCAAGCATT
TTAACGTTTACAGTATTCTGCAGTCTCTGAGAAGAAATCAGAGCTGTCTG
GACCTAAAATAGGATGAATGCTAGGCTATATTACAGCTATCTTGAGATGT
CCATGTCCTTCCCAGGTTACTATGTGTACGTGGAGGCGTCCAGCCCTCGA
CAGGACGGTGACATTGCCAGACTGGAGACGGGCAGCCTCCCAGCCACCTC
TACCGACGGCAGCTGCCTCTCCTTCTGGTACCACATGTTTGGGCCCCACA
TCGGCTCCCTGTCCGTGCACATGCAGCAGGAAGGACAGGCAAA Coding sequence (CDS) from alignment at Sc0000000:3071145..3074587- >transcript:BL96594_cuf12 ID=transcript:BL96594_cuf12|Name=transcript:BL96594_cuf12|organism=Branchiostoma lanceolatum|type=CDS|length=7077bp|location=Sequence derived from alignment at Sc0000000:3071145..3074587- (Branchiostoma lanceolatum) CCCATGCCCACTACCATCGCCCCTCCGGTCACCACCCAGTCCCCCTGCCA GCCCGGACAGTTCAAGTGTCTGGAGGATAACTCGTGCATCGATGCCAGCA AAGTCTGTGACTACATCATGGACTGTTTCACCAGTTCTCCTTCTGTGATG CCTTCGGATGAAGCCATGTGTGGTGCCTGTACCTTTGAACGTGACCAGTG CGGATGGACAGATATCAGTACTGGACAGTACGACTGGACAAGAAACCAAG GACCAACTTCTACAGCCAACACTGGACCATCGGTGGACCATACTACACAG ACTGGACAGGGTCACTACATGTATGTGGAGGGAGGCAGTGGACTGTTCCT CACCCCAGCAGCCATGCAGAGCGTCCCGCTGTCACAAACATCCAATGTCT GTCAGGTGCGTTTCTACTACCACATGTACGGCCCAGGTGTAGGCGTCCTG AGGCTGATGCTGGATGCTGCTGGGGACGGCAGCGCCCTGACAGAGCTGTG GAGAAATGAAAACGACATGGGAGATGCCTGGCAGCAGGCTACAGTCAACC TCGCTGGACAGCGGGATGGCTACAGGCTTCAGTTCCAGGGAGTGCCAAGC TCTTCTGGTGGTGGAGGCTGGGGCTTCCTCCTGCCTGACACAGACGATAT GGCTGTTGATGACATCACCTTCATCCAATGTGACCTTGGCTCCGACAGAG ACTATAACTGTACGTTTGAGAGCGGCCTGTGCGGATGGCACCAATCAACA GACGATGACTTTGACTGGACTCGACAGCAGGGGGCCACGGCCAGCAGCAA CACTGGACCAGACAACGACCACACCACTGGCACAGGTTACTATGTGTACG TGGAGGCGTCCAGCCCTCGACAGGACGGTGACATTGCCAGACTGGAGACG GGCAGCCTCCCAGCCACCTCTACCGACGGCAGCTGCCTCTCCTTCTGGTA CCACATGTTTGGGCCCCACATCGGCTCCCTGTCCGTGCACATGCAGCAGG AAGGACAGGCACCCATGCCCACTACCATCGCCCCTCCGGTCACCACCCAG TCCCCCTGCCAGCCCGGACAGTTCAAGTGTCTGGAGGATAACTCGTGCAT CGATGCCAGCAAAGTCTGTGACTACATCATGGACTGTTTCACCAGTTCTC CTTCTGTGATGCCTTCGGATGAAGCCATGTGTGGTGCCTGTACCTTTGAA CGTGACCAGTGCGGATGGACAGATATCAGTACTGGACAGTACGACTGGAC AAGAAACCAAGGACCAACTTCTACAGCCAACACTGGACCATCGGTGGACC ATACTACACAGACTGGACAGGGTCACTACATGTATGTGGAGGGAGGCAGT GGACTGTTCCTCACCCCAGCAGCCATGCAGAGCGTCCCGCTGTCACAAAC ATCCAATGTCTGTCAGGTGCGTTTCTACTACCACATGTACGGCCCAGGTG TAGGCGTCCTGAGGCTGATGCTGGATGCTGCTGGGGACGGCAGCGCCCTG ACAGAGCTGTGGAGAAATGAAAACGACATGGGAGATGCCTGGCAGCAGGC TACAGTCAACCTCGCTGGACAGCGGGATGGCTACAGGCTTCAGTTCCAGG GAGTGCCAAGCTCTTCTGGTGGTGGAGGCTGGGGCTTCCTCCTGCCTGAC ACAGACGATATGGCTGTTGATGACATCACCTTCATCCAATGTGACCTTGG CTCCGACAGAGACTATAACTGTACGTTTGAGAGCGGCCTGTGCGGATGGC ACCAATCAACAGACGATGACTTTGACTGGACTCGACAGCAGGGGGCCACG GCCAGCAGCAACACTGGACCAGACAACGACCACACCACTGGCACAGGTTA CTATGTGTACGTGGAGGCGTCCAGCCCTCGACAGGACGGTGACATTGCCA GACTGGAGACGGGCAGCCTCCCAGCCACCTCTACCGACGGCAGCTGCCTC TCCTTCTGGTACCACATGTTTGGGCCCCACATCGGCTCCCTGTCCGTGCA CATGCAGCAGGAAGGACAGGCACCCATGCCCACTACCATCGCCCCTCCGG TCACCACCCAGTCCCCCTGCCAGCCCGGACAGTTCAAGTGTCTGGAGGAT AACTCGTGCATCGATGCCAGCAAAGTCTGTGACTACATCATGGACTGTTT CACCAGTTCTCCTTCTGTGATGCCTTCGGATGAAGCCATGTGTGGTGCCT GTACCTTTGAACGTGACCAGTGCGGATGGACAGATATCAGTACTGGACAG TACGACTGGACAAGAAACCAAGGACCAACTTCTACAGCCAACACTGGACC ATCGGTGGACCATACTACACAGACTGGACAGGGTCACTACATGTATGTGG AGGGAGGCAGTGGACTGTTCCTCACCCCAGCAGCCATGCAGAGCGTCCCG CTGTCACAAACATCCAATGTCTGTCAGGTGCGTTTCTACTACCACATGTA CGGCCCAGGTGTAGGCGTCCTGAGGCTGATGCTGGATGCTGCTGGGGACG GCAGCGCCCTGACAGAGCTGTGGAGAAATGAAAACGACATGGGAGATGCC TGGCAGCAGGCTACAGTCAACCTCGCTGGACAGCGGGATGGCTACAGGCT TCAGTTCCAGGGAGTGCCAAGCTCTTCTGGTGGTGGAGGCTGGGGCTTCC TCCTGCCTGACACAGACGATATGGCTGTTGATGACATCACCTTCATCCAA TGTGACCTTGGCTCCGACAGAGACTATAACTGTACGTTTGAGAGCGGCCT GTGCGGATGGCACCAATCAACAGACGATGACTTTGACTGGACTCGACAGC AGGGGGCCACGGCCAGCAGCAACACTGGACCAGACAACGACCACACCACT GGCACAGGTTACTATGTGTACGTGGAGGCGTCCAGCCCTCGACAGGACGG TGACATTGCCAGACTGGAGACGGGCAGCCTCCCAGCCACCTCTACCGACG GCAGCTGCCTCTCCTTCTGGTACCACATGTTTGGGCCCCACATCGGCTCC CTGTCCGTGCACATGCAGCAGGAAGGACAGGCACCCATGCCCACTACCAT CGCCCCTCCGGTCACCACCCAGTCCCCCTGCCAGCCCGGACAGTTCAAGT GTCTGGAGGATAACTCGTGCATCGATGCCAGCAAAGTCTGTGACTACATC ATGGACTGTTTCACCAGTTCTCCTTCTGTGATGCCTTCGGATGAAGCCAT GTGTGGTGCCTGTACCTTTGAACGTGACCAGTGCGGATGGACAGATATCA GTACTGGACAGTACGACTGGACAAGAAACCAAGGACCAACTTCTACAGCC AACACTGGACCATCGGTGGACCATACTACACAGACTGGACAGGGTCACTA CATGTATGTGGAGGGAGGCAGTGGACTGTTCCTCACCCCAGCAGCCATGC AGAGCGTCCCGCTGTCACAAACATCCAATGTCTGTCAGGTGCGTTTCTAC TACCACATGTACGGCCCAGGTGTAGGCGTCCTGAGGCTGATGCTGGATGC TGCTGGGGACGGCAGCGCCCTGACAGAGCTGTGGAGAAATGAAAACGACA TGGGAGATGCCTGGCAGCAGGCTACAGTCAACCTCGCTGGACAGCGGGAT GGCTACAGGCTTCAGTTCCAGGGAGTGCCAAGCTCTTCTGGTGGTGGAGG CTGGGGCTTCCTCCTGCCTGACACAGACGATATGGCTGTTGATGACATCA CCTTCATCCAATGTGACCTTGGCTCCGACAGAGACTATAACTGTACGTTT GAGAGCGGCCTGTGCGGATGGCACCAATCAACAGACGATGACTTTGACTG GACTCGACAGCAGGGGGCCACGGCCAGCAGCAACACTGGACCAGACAACG ACCACACCACTGGCACAGGTTACTATGTGTACGTGGAGGCGTCCAGCCCT CGACAGGACGGTGACATTGCCAGACTGGAGACGGGCAGCCTCCCAGCCAC CTCTACCGACGGCAGCTGCCTCTCCTTCTGGTACCACATGTTTGGGCCCC ACATCGGCTCCCTGTCCGTGCACATGCAGCAGGAAGGACAGGCACCCATG CCCACTACCATCGCCCCTCCGGTCACCACCCAGTCCCCCTGCCAGCCCGG ACAGTTCAAGTGTCTGGAGGATAACTCGTGCATCGATGCCAGCAAAGTCT GTGACTACATCATGGACTGTTTCACCAGTTCTCCTTCTGTGATGCCTTCG GATGAAGCCATGTGTGGTGCCTGTACCTTTGAACGTGACCAGTGCGGATG GACAGATATCAGTACTGGACAGTACGACTGGACAAGAAACCAAGGACCAA CTTCTACAGCCAACACTGGACCATCGGTGGACCATACTACACAGACTGGA CAGGGTCACTACATGTATGTGGAGGGAGGCAGTGGACTGTTCCTCACCCC AGCAGCCATGCAGAGCGTCCCGCTGTCACAAACATCCAATGTCTGTCAGG TGCGTTTCTACTACCACATGTACGGCCCAGGTGTAGGCGTCCTGAGGCTG ATGCTGGATGCTGCTGGGGACGGCAGCGCCCTGACAGAGCTGTGGAGAAA TGAAAACGACATGGGAGATGCCTGGCAGCAGGCTACAGTCAACCTCGCTG GACAGCGGGATGGCTACAGGCTTCAGTTCCAGGGAGTGCCAAGCTCTTCT GGTGGTGGAGGCTGGGGCTTCCTCCTGCCTGACACAGACGATATGGCTGT TGATGACATCACCTTCATCCAATGTGACCTTGGCTCCGACAGAGACTATA ACTGTACGTTTGAGAGCGGCCTGTGCGGATGGCACCAATCAACAGACGAT GACTTTGACTGGACTCGACAGCAGGGGGCCACGGCCAGCAGCAACACTGG ACCAGACAACGACCACACCACTGGCACAGGTTACTATGTGTACGTGGAGG CGTCCAGCCCTCGACAGGACGGTGACATTGCCAGACTGGAGACGGGCAGC CTCCCAGCCACCTCTACCGACGGCAGCTGCCTCTCCTTCTGGTACCACAT GTTTGGGCCCCACATCGGCTCCCTGTCCGTGCACATGCAGCAGGAAGGAC AGGCACCCATGCCCACTACCATCGCCCCTCCGGTCACCACCCAGTCCCCC TGCCAGCCCGGACAGTTCAAGTGTCTGGAGGATAACTCGTGCATCGATGC CAGCAAAGTCTGTGACTACATCATGGACTGTTTCACCAGTTCTCCTTCTG TGATGCCTTCGGATGAAGCCATGTGTGGTGCCTGTACCTTTGAACGTGAC CAGTGCGGATGGACAGATATCAGTACTGGACAGTACGACTGGACAAGAAA CCAAGGACCAACTTCTACAGCCAACACTGGACCATCGGTGGACCATACTA CACAGACTGGACAGGGTCACTACATGTATGTGGAGGGAGGCAGTGGACTG TTCCTCACCCCAGCAGCCATGCAGAGCGTCCCGCTGTCACAAACATCCAA TGTCTGTCAGGTGCGTTTCTACTACCACATGTACGGCCCAGGTGTAGGCG TCCTGAGGCTGATGCTGGATGCTGCTGGGGACGGCAGCGCCCTGACAGAG CTGTGGAGAAATGAAAACGACATGGGAGATGCCTGGCAGCAGGCTACAGT CAACCTCGCTGGACAGCGGGATGGCTACAGGCTTCAGTTCCAGGGAGTGC CAAGCTCTTCTGGTGGTGGAGGCTGGGGCTTCCTCCTGCCTGACACAGAC GATATGGCTGTTGATGACATCACCTTCATCCAATGTGACCTTGGCTCCGA CAGAGACTATAACTGTACGTTTGAGAGCGGCCTGTGCGGATGGCACCAAT CAACAGACGATGACTTTGACTGGACTCGACAGCAGGGGGCCACGGCCAGC AGCAACACTGGACCAGACAACGACCACACCACTGGCACAGGTTACTATGT GTACGTGGAGGCGTCCAGCCCTCGACAGGACGGTGACATTGCCAGACTGG AGACGGGCAGCCTCCCAGCCACCTCTACCGACGGCAGCTGCCTCTCCTTC TGGTACCACATGTTTGGGCCCCACATCGGCTCCCTGTCCGTGCACATGCA GCAGGAAGGACAGGCACCCATGCCCACTACCATCGCCCCTCCGGTCACCA CCCAGTCCCCCTGCCAGCCCGGACAGTTCAAGTGTCTGGAGGATAACTCG TGCATCGATGCCAGCAAAGTCTGTGACTACATCATGGACTGTTTCACCAG TTCTCCTTCTGTGATGCCTTCGGATGAAGCCATGTGTGGTGCCTGTACCT TTGAACGTGACCAGTGCGGATGGACAGATATCAGTACTGGACAGTACGAC TGGACAAGAAACCAAGGACCAACTTCTACAGCCAACACTGGACCATCGGT GGACCATACTACACAGACTGGACAGGGTCACTACATGTATGTGGAGGGAG GCAGTGGACTGTTCCTCACCCCAGCAGCCATGCAGAGCGTCCCGCTGTCA CAAACATCCAATGTCTGTCAGGTGCGTTTCTACTACCACATGTACGGCCC AGGTGTAGGCGTCCTGAGGCTGATGCTGGATGCTGCTGGGGACGGCAGCG CCCTGACAGAGCTGTGGAGAAATGAAAACGACATGGGAGATGCCTGGCAG CAGGCTACAGTCAACCTCGCTGGACAGCGGGATGGCTACAGGCTTCAGTT CCAGGGAGTGCCAAGCTCTTCTGGTGGTGGAGGCTGGGGCTTCCTCCTGC CTGACACAGACGATATGGCTGTTGATGACATCACCTTCATCCAATGTGAC CTTGGCTCCGACAGAGACTATAACTGTACGTTTGAGAGCGGCCTGTGCGG ATGGCACCAATCAACAGACGATGACTTTGACTGGACTCGACAGCAGGGGG CCACGGCCAGCAGCAACACTGGACCAGACAACGACCACACCACTGGCACA GGTTACTATGTGTACGTGGAGGCGTCCAGCCCTCGACAGGACGGTGACAT TGCCAGACTGGAGACGGGCAGCCTCCCAGCCACCTCTACCGACGGCAGCT GCCTCTCCTTCTGGTACCACATGTTTGGGCCCCACATCGGCTCCCTGTCC GTGCACATGCAGCAGGAAGGACAGGCA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
Sc0000000 | genome | Sc0000000:3071145..3074587 - |
Properties
Property Name | Value |
Transcript id | BL96594_cuf12 |
Biotype | protein_coding |
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